Protein–RNA interactions for Protein: Q96M19

LINC00477, Putative transmembrane protein encoded by LINC00477, humanhuman

Predictions only

Length 166 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00477Q96M19 RPS3A-208ENST00000509736 576 ntTSL 2 BASIC1.77□□□□□ -2.13
LINC00477Q96M19 AC005920.2-201ENST00000509833 332 ntTSL 3 BASIC1.77□□□□□ -2.13
LINC00477Q96M19 AC026436.1-201ENST00000510537 270 ntBASIC1.77□□□□□ -2.13
LINC00477Q96M19 AC108078.2-201ENST00000510750 236 ntBASIC1.77□□□□□ -2.13
LINC00477Q96M19 AC107222.1-201ENST00000510899 637 ntBASIC1.77□□□□□ -2.13
LINC00477Q96M19 RNU6ATAC13P-201ENST00000516152 131 ntBASIC1.77□□□□□ -2.13
LINC00477Q96M19 RNU1-103P-201ENST00000516502 125 ntBASIC1.77□□□□□ -2.13
LINC00477Q96M19 MIR514B-201ENST00000516774 80 ntBASIC1.77□□□□□ -2.13
LINC00477Q96M19 AC135279.1-201ENST00000543493 504 ntBASIC1.77□□□□□ -2.13
LINC00477Q96M19 AC008083.1-201ENST00000547748 663 ntTSL 2 BASIC1.77□□□□□ -2.13
LINC00477Q96M19 AC087463.2-201ENST00000565943 472 ntTSL 3 BASIC1.77□□□□□ -2.13
LINC00477Q96M19 MIR4319-201ENST00000577285 85 ntBASIC1.77□□□□□ -2.13
LINC00477Q96M19 AC005261.5-201ENST00000596280 355 ntBASIC1.77□□□□□ -2.13
LINC00477Q96M19 AC025165.5-201ENST00000602802 578 ntBASIC1.77□□□□□ -2.13
LINC00477Q96M19 DLEU2_1.1-201ENST00000612089 120 ntBASIC1.77□□□□□ -2.13
LINC00477Q96M19 MIR7106-201ENST00000612419 65 ntBASIC1.77□□□□□ -2.13
LINC00477Q96M19 AC068506.1-202ENST00000613388 545 ntTSL 3 BASIC1.77□□□□□ -2.13
LINC00477Q96M19 DLEU2_1.2-201ENST00000614667 120 ntBASIC1.77□□□□□ -2.13
LINC00477Q96M19 AC026523.1-201ENST00000617221 490 ntTSL 5 BASIC1.77□□□□□ -2.13
LINC00477Q96M19 MIR7157-201ENST00000635801 60 ntBASIC1.77□□□□□ -2.13
LINC00477Q96M19 Clostridiales-1.3-201ENST00000637703 147 ntBASIC1.77□□□□□ -2.13
LINC00477Q96M19 AC069528.2-201ENST00000624849 1991 ntBASIC1.77□□□□□ -2.13
LINC00477Q96M19 OR2L2-203ENST00000642011 4225 ntAPPRIS P1 BASIC1.77□□□□□ -2.13
LINC00477Q96M19 USP53-202ENST00000450251 6072 ntAPPRIS P1 TSL 5 BASIC1.77□□□□□ -2.13
LINC00477Q96M19 ZCCHC10-201ENST00000324170 2178 ntAPPRIS P3 TSL 1 (best) BASIC1.76□□□□□ -2.13
LINC00477Q96M19 ELF2P3-201ENST00000445099 1506 ntBASIC1.76□□□□□ -2.13
LINC00477Q96M19 SNORA62.1-201ENST00000364287 154 ntBASIC1.76□□□□□ -2.13
LINC00477Q96M19 OR5H15-201ENST00000383696 930 ntBASIC1.76□□□□□ -2.13
LINC00477Q96M19 Y_RNA.409-201ENST00000383990 98 ntBASIC1.76□□□□□ -2.13
LINC00477Q96M19 Y_RNA.576-201ENST00000384781 102 ntBASIC1.76□□□□□ -2.13
LINC00477Q96M19 MIR578-201ENST00000384828 96 ntBASIC1.76□□□□□ -2.13
LINC00477Q96M19 RNU6-220P-201ENST00000390919 107 ntBASIC1.76□□□□□ -2.13
LINC00477Q96M19 CISD1P1-201ENST00000393907 327 ntBASIC1.76□□□□□ -2.13
LINC00477Q96M19 AL445529.1-201ENST00000398713 389 ntBASIC1.76□□□□□ -2.13
LINC00477Q96M19 U3.40-201ENST00000408706 208 ntBASIC1.76□□□□□ -2.13
LINC00477Q96M19 RNU6-1328P-201ENST00000410938 106 ntBASIC1.76□□□□□ -2.13
LINC00477Q96M19 HNRNPDLP1-201ENST00000412834 550 ntBASIC1.76□□□□□ -2.13
LINC00477Q96M19 BPY2DP-201ENST00000422208 265 ntBASIC1.76□□□□□ -2.13
LINC00477Q96M19 AC005009.1-201ENST00000423979 269 ntTSL 2 BASIC1.76□□□□□ -2.13
LINC00477Q96M19 AC010975.2-201ENST00000427781 588 ntBASIC1.76□□□□□ -2.13
LINC00477Q96M19 GPM6BP2-201ENST00000432046 144 ntBASIC1.76□□□□□ -2.13
LINC00477Q96M19 AC099566.1-201ENST00000442558 479 ntTSL 3 BASIC1.76□□□□□ -2.13
LINC00477Q96M19 GPM6BP1-201ENST00000446387 144 ntBASIC1.76□□□□□ -2.13
LINC00477Q96M19 AL118520.1-201ENST00000450770 291 ntBASIC1.76□□□□□ -2.13
LINC00477Q96M19 MTND1P27-201ENST00000451117 902 ntBASIC1.76□□□□□ -2.13
LINC00477Q96M19 SNORD97-201ENST00000459187 142 ntBASIC1.76□□□□□ -2.13
LINC00477Q96M19 AC117386.2-202ENST00000472821 522 ntTSL 3 BASIC1.76□□□□□ -2.13
LINC00477Q96M19 FAM92A1P2-202ENST00000504766 877 ntBASIC1.76□□□□□ -2.13
LINC00477Q96M19 AC092436.1-201ENST00000506450 503 ntBASIC1.76□□□□□ -2.13
LINC00477Q96M19 AC098591.2-201ENST00000510152 315 ntBASIC1.76□□□□□ -2.13
LINC00477Q96M19 AC097467.3-212ENST00000512269 568 ntTSL 3 BASIC1.76□□□□□ -2.13
LINC00477Q96M19 SCARNA17.1-201ENST00000516211 143 ntBASIC1.76□□□□□ -2.13
LINC00477Q96M19 SCARNA17.2-201ENST00000516334 143 ntBASIC1.76□□□□□ -2.13
LINC00477Q96M19 RNU7-51P-201ENST00000516560 62 ntBASIC1.76□□□□□ -2.13
LINC00477Q96M19 SKP1-203ENST00000517625 876 ntAPPRIS P4 TSL 3 BASIC1.76□□□□□ -2.13
LINC00477Q96M19 AC087664.2-201ENST00000522898 551 ntTSL 4 BASIC1.76□□□□□ -2.13
LINC00477Q96M19 AC087883.1-201ENST00000551882 391 ntBASIC1.76□□□□□ -2.13
LINC00477Q96M19 FOPNL-205ENST00000573429 646 ntTSL 3 BASIC1.76□□□□□ -2.13
LINC00477Q96M19 MIR5571-201ENST00000577998 113 ntBASIC1.76□□□□□ -2.13
LINC00477Q96M19 AC007631.1-201ENST00000578545 189 ntTSL 3 BASIC1.76□□□□□ -2.13
LINC00477Q96M19 LARP7P3-201ENST00000579888 337 ntBASIC1.76□□□□□ -2.13
LINC00477Q96M19 MIR5583-1-201ENST00000580941 59 ntBASIC1.76□□□□□ -2.13
LINC00477Q96M19 AC078899.2-201ENST00000595282 212 ntBASIC1.76□□□□□ -2.13
LINC00477Q96M19 AC012409.4-201ENST00000612923 249 ntBASIC1.76□□□□□ -2.13
LINC00477Q96M19 SCARNA17.4-201ENST00000614296 143 ntBASIC1.76□□□□□ -2.13
LINC00477Q96M19 AC244093.3-201ENST00000615419 411 ntTSL 3 BASIC1.76□□□□□ -2.13
LINC00477Q96M19 AC011155.2-201ENST00000623202 216 ntBASIC1.76□□□□□ -2.13
LINC00477Q96M19 AC007405.1-203ENST00000623667 932 ntTSL 5 BASIC1.76□□□□□ -2.13
LINC00477Q96M19 LINC01090-203ENST00000632331 466 ntTSL 5 BASIC1.76□□□□□ -2.13
LINC00477Q96M19 AL512643.1-201ENST00000635735 524 ntBASIC1.76□□□□□ -2.13
LINC00477Q96M19 MIR4275-201ENST00000636486 87 ntBASIC1.76□□□□□ -2.13
LINC00477Q96M19 CHORDC1-205ENST00000529726 4805 ntTSL 2 BASIC1.76□□□□□ -2.13
LINC00477Q96M19 SCN7A-201ENST00000409855 7183 ntAPPRIS P1 TSL 1 (best) BASIC1.76□□□□□ -2.13
LINC00477Q96M19 CCDC82-202ENST00000423339 1878 ntAPPRIS P2 TSL 1 (best) BASIC1.75□□□□□ -2.13
LINC00477Q96M19 HAS2-201ENST00000303924 4190 ntAPPRIS P1 TSL 1 (best) BASIC1.75□□□□□ -2.13
LINC00477Q96M19 AMY2B-208ENST00000610648 1736 ntAPPRIS P1 TSL 1 (best) BASIC1.75□□□□□ -2.13
LINC00477Q96M19 AC103710.2-202ENST00000641454 2853 ntBASIC1.75□□□□□ -2.13
LINC00477Q96M19 Y_RNA.194-201ENST00000363985 102 ntBASIC1.75□□□□□ -2.13
LINC00477Q96M19 RNU6-641P-201ENST00000384006 107 ntBASIC1.75□□□□□ -2.13
LINC00477Q96M19 U3.26-201ENST00000391236 204 ntBASIC1.75□□□□□ -2.13
LINC00477Q96M19 RNU2-39P-201ENST00000410604 198 ntBASIC1.75□□□□□ -2.13
LINC00477Q96M19 UBE2V1P10-201ENST00000414685 269 ntBASIC1.75□□□□□ -2.13
LINC00477Q96M19 AL109914.1-201ENST00000414740 146 ntTSL 5 BASIC1.75□□□□□ -2.13
LINC00477Q96M19 AC096649.2-201ENST00000416186 393 ntBASIC1.75□□□□□ -2.13
LINC00477Q96M19 AC073311.1-201ENST00000420146 505 ntTSL 5 BASIC1.75□□□□□ -2.13
LINC00477Q96M19 AL160272.1-201ENST00000421509 521 ntTSL 3 BASIC1.75□□□□□ -2.13
LINC00477Q96M19 AC005062.1-206ENST00000424516 710 ntTSL 3 BASIC1.75□□□□□ -2.13
LINC00477Q96M19 MTCO2P19-201ENST00000427513 598 ntBASIC1.75□□□□□ -2.13
LINC00477Q96M19 MED13P1-201ENST00000428342 171 ntBASIC1.75□□□□□ -2.13
LINC00477Q96M19 AC236972.1-201ENST00000433225 199 ntBASIC1.75□□□□□ -2.13
LINC00477Q96M19 AP000477.2-201ENST00000447405 778 ntTSL 3 BASIC1.75□□□□□ -2.13
LINC00477Q96M19 AL360271.2-201ENST00000447710 161 ntBASIC1.75□□□□□ -2.13
LINC00477Q96M19 AC132479.1-201ENST00000449160 144 ntBASIC1.75□□□□□ -2.13
LINC00477Q96M19 PSPHP1-201ENST00000450062 261 ntBASIC1.75□□□□□ -2.13
LINC00477Q96M19 AC108938.1-201ENST00000451204 136 ntBASIC1.75□□□□□ -2.13
LINC00477Q96M19 FABP5P13-201ENST00000452144 328 ntBASIC1.75□□□□□ -2.13
LINC00477Q96M19 OFD1P4Y-201ENST00000455273 1179 ntBASIC1.75□□□□□ -2.13
LINC00477Q96M19 RPS29P15-201ENST00000458329 171 ntBASIC1.75□□□□□ -2.13
LINC00477Q96M19 AC090515.1-201ENST00000465295 476 ntBASIC1.75□□□□□ -2.13
LINC00477Q96M19 RPL39P36-201ENST00000490784 156 ntBASIC1.75□□□□□ -2.13
Retrieved 100 of 98,524 protein–RNA pairs in 115.9 ms