Protein–RNA interactions for Protein: Q96KN3

PKNOX2, Homeobox protein PKNOX2, humanhuman

Predictions only

Length 472 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PKNOX2Q96KN3 PCAT4-202ENST00000514836 373 ntTSL 3 BASIC2.01□□□□□ -2.09
PKNOX2Q96KN3 RNU6-1183P-201ENST00000517054 60 ntBASIC2.01□□□□□ -2.09
PKNOX2Q96KN3 SMIM18-201ENST00000517349 905 ntAPPRIS P1 TSL 2 BASIC2.01□□□□□ -2.09
PKNOX2Q96KN3 AC092747.1-202ENST00000540595 380 ntTSL 5 BASIC2.01□□□□□ -2.09
PKNOX2Q96KN3 AC026464.5-201ENST00000562497 722 ntBASIC2.01□□□□□ -2.09
PKNOX2Q96KN3 AP005671.1-201ENST00000581798 463 ntTSL 3 BASIC2.01□□□□□ -2.09
PKNOX2Q96KN3 LINC01899-202ENST00000583756 575 ntTSL 3 BASIC2.01□□□□□ -2.09
PKNOX2Q96KN3 MIR4999-201ENST00000585029 91 ntBASIC2.01□□□□□ -2.09
PKNOX2Q96KN3 BNIP3P9-201ENST00000603714 553 ntBASIC2.01□□□□□ -2.09
PKNOX2Q96KN3 AL670379.6-201ENST00000603753 252 ntBASIC2.01□□□□□ -2.09
PKNOX2Q96KN3 AL670379.11-201ENST00000604059 253 ntBASIC2.01□□□□□ -2.09
PKNOX2Q96KN3 AC008162.1-201ENST00000604718 254 ntBASIC2.01□□□□□ -2.09
PKNOX2Q96KN3 AL670379.1-201ENST00000604752 252 ntBASIC2.01□□□□□ -2.09
PKNOX2Q96KN3 AL670379.5-201ENST00000605253 252 ntBASIC2.01□□□□□ -2.09
PKNOX2Q96KN3 AL670379.12-201ENST00000605291 253 ntBASIC2.01□□□□□ -2.09
PKNOX2Q96KN3 AL670379.8-201ENST00000605353 252 ntBASIC2.01□□□□□ -2.09
PKNOX2Q96KN3 AL670379.7-201ENST00000605823 252 ntBASIC2.01□□□□□ -2.09
PKNOX2Q96KN3 AL391813.2-201ENST00000609113 322 ntBASIC2.01□□□□□ -2.09
PKNOX2Q96KN3 AC016597.2-201ENST00000613256 341 ntBASIC2.01□□□□□ -2.09
PKNOX2Q96KN3 AP002782.1-201ENST00000623107 614 ntBASIC2.01□□□□□ -2.09
PKNOX2Q96KN3 AL391994.1-201ENST00000254724 282 ntBASIC2□□□□□ -2.09
PKNOX2Q96KN3 SNORD113-6-201ENST00000363345 75 ntBASIC2□□□□□ -2.09
PKNOX2Q96KN3 RNY3P13-201ENST00000365542 102 ntBASIC2□□□□□ -2.09
PKNOX2Q96KN3 CRISP3-203ENST00000371159 872 ntAPPRIS ALT2 TSL 5 BASIC2□□□□□ -2.09
PKNOX2Q96KN3 RNU6-1200P-201ENST00000384162 107 ntBASIC2□□□□□ -2.09
PKNOX2Q96KN3 RNA5SP425-201ENST00000410336 112 ntBASIC2□□□□□ -2.09
PKNOX2Q96KN3 RNU2-62P-201ENST00000410868 191 ntBASIC2□□□□□ -2.09
PKNOX2Q96KN3 LINC01780-201ENST00000420059 442 ntTSL 2 BASIC2□□□□□ -2.09
PKNOX2Q96KN3 AL049637.1-201ENST00000424664 503 ntTSL 5 BASIC2□□□□□ -2.09
PKNOX2Q96KN3 AL592045.1-201ENST00000429867 352 ntBASIC2□□□□□ -2.09
PKNOX2Q96KN3 AL731563.2-201ENST00000431293 291 ntTSL 5 BASIC2□□□□□ -2.09
PKNOX2Q96KN3 AL157937.1-201ENST00000435092 443 ntTSL 3 BASIC2□□□□□ -2.09
PKNOX2Q96KN3 MTND4P25-201ENST00000441039 533 ntBASIC2□□□□□ -2.09
PKNOX2Q96KN3 HIGD1AP2-201ENST00000446367 280 ntBASIC2□□□□□ -2.09
PKNOX2Q96KN3 AC245102.2-201ENST00000448956 180 ntBASIC2□□□□□ -2.09
PKNOX2Q96KN3 FGF14-AS1-202ENST00000451630 321 ntTSL 2 BASIC2□□□□□ -2.09
PKNOX2Q96KN3 SNORD97-201ENST00000459187 142 ntBASIC2□□□□□ -2.09
PKNOX2Q96KN3 RNU6-143P-201ENST00000516942 93 ntBASIC2□□□□□ -2.09
PKNOX2Q96KN3 AP001646.1-201ENST00000527936 915 ntBASIC2□□□□□ -2.09
PKNOX2Q96KN3 AP005435.4-201ENST00000529514 284 ntBASIC2□□□□□ -2.09
PKNOX2Q96KN3 HOMER1-205ENST00000535690 642 ntTSL 1 (best) BASIC2□□□□□ -2.09
PKNOX2Q96KN3 AC090888.2-201ENST00000559765 1144 ntBASIC2□□□□□ -2.09
PKNOX2Q96KN3 MIR4422-201ENST00000581938 83 ntBASIC2□□□□□ -2.09
PKNOX2Q96KN3 AP001004.1-201ENST00000582468 324 ntBASIC2□□□□□ -2.09
PKNOX2Q96KN3 AP001109.1-201ENST00000587114 279 ntTSL 3 BASIC2□□□□□ -2.09
PKNOX2Q96KN3 AC108747.1-201ENST00000609508 535 ntBASIC2□□□□□ -2.09
PKNOX2Q96KN3 AC245297.3-203ENST00000612135 405 ntTSL 5 BASIC2□□□□□ -2.09
PKNOX2Q96KN3 uc_338.12-201ENST00000616344 181 ntBASIC2□□□□□ -2.09
PKNOX2Q96KN3 AL031667.3-201ENST00000620124 655 ntBASIC2□□□□□ -2.09
PKNOX2Q96KN3 ZEB2_AS1_1.1-201ENST00000621504 128 ntBASIC2□□□□□ -2.09
PKNOX2Q96KN3 AC243829.7-201ENST00000633081 225 ntBASIC2□□□□□ -2.09
PKNOX2Q96KN3 AC025539.1-201ENST00000515343 4019 ntTSL 2 BASIC1.99□□□□□ -2.09
PKNOX2Q96KN3 CCDC82-202ENST00000423339 1878 ntAPPRIS P2 TSL 1 (best) BASIC1.99□□□□□ -2.09
PKNOX2Q96KN3 RNU6-253P-201ENST00000384730 105 ntBASIC1.99□□□□□ -2.09
PKNOX2Q96KN3 RNU6ATAC2P-201ENST00000387943 126 ntBASIC1.99□□□□□ -2.09
PKNOX2Q96KN3 RPS20P2-201ENST00000402520 389 ntBASIC1.99□□□□□ -2.09
PKNOX2Q96KN3 SNORA11.4-201ENST00000408823 129 ntBASIC1.99□□□□□ -2.09
PKNOX2Q96KN3 RPS12P24-201ENST00000412619 387 ntBASIC1.99□□□□□ -2.09
PKNOX2Q96KN3 MTCO3P46-201ENST00000425787 232 ntBASIC1.99□□□□□ -2.09
PKNOX2Q96KN3 AC114485.1-201ENST00000447916 657 ntTSL 3 BASIC1.99□□□□□ -2.09
PKNOX2Q96KN3 SPIN4-AS1-201ENST00000451979 426 ntTSL 2 BASIC1.99□□□□□ -2.09
PKNOX2Q96KN3 RNU6-953P-201ENST00000459154 107 ntBASIC1.99□□□□□ -2.09
PKNOX2Q96KN3 RNA5SP57-201ENST00000459463 123 ntBASIC1.99□□□□□ -2.09
PKNOX2Q96KN3 AP001324.2-201ENST00000461163 319 ntBASIC1.99□□□□□ -2.09
PKNOX2Q96KN3 AC096711.2-201ENST00000510592 454 ntTSL 5 BASIC1.99□□□□□ -2.09
PKNOX2Q96KN3 SMURF2P1-201ENST00000514992 481 ntBASIC1.99□□□□□ -2.09
PKNOX2Q96KN3 RNU6-201P-201ENST00000517100 61 ntBASIC1.99□□□□□ -2.09
PKNOX2Q96KN3 AC023632.5-201ENST00000521010 491 ntTSL 3 BASIC1.99□□□□□ -2.09
PKNOX2Q96KN3 AP003122.3-201ENST00000526316 255 ntBASIC1.99□□□□□ -2.09
PKNOX2Q96KN3 AC084851.1-201ENST00000529105 249 ntBASIC1.99□□□□□ -2.09
PKNOX2Q96KN3 AC123904.2-201ENST00000548059 300 ntBASIC1.99□□□□□ -2.09
PKNOX2Q96KN3 ARL2BPP2-201ENST00000550907 489 ntBASIC1.99□□□□□ -2.09
PKNOX2Q96KN3 AL160236.1-201ENST00000556317 195 ntBASIC1.99□□□□□ -2.09
PKNOX2Q96KN3 AC245884.10-201ENST00000597355 337 ntBASIC1.99□□□□□ -2.09
PKNOX2Q96KN3 BNIP3P39-201ENST00000601077 554 ntBASIC1.99□□□□□ -2.09
PKNOX2Q96KN3 AC107952.2-201ENST00000606048 486 ntBASIC1.99□□□□□ -2.09
PKNOX2Q96KN3 AC026790.2-201ENST00000606282 430 ntBASIC1.99□□□□□ -2.09
PKNOX2Q96KN3 uc_338.5-201ENST00000611839 155 ntBASIC1.99□□□□□ -2.09
PKNOX2Q96KN3 Y_RNA.783-201ENST00000613546 102 ntBASIC1.99□□□□□ -2.09
PKNOX2Q96KN3 MIR6134-201ENST00000617606 109 ntBASIC1.99□□□□□ -2.09
PKNOX2Q96KN3 AC025034.2-201ENST00000623264 286 ntBASIC1.99□□□□□ -2.09
PKNOX2Q96KN3 U6.99-201ENST00000637524 83 ntBASIC1.99□□□□□ -2.09
PKNOX2Q96KN3 CDC27P3-201ENST00000635418 1910 ntBASIC1.99□□□□□ -2.09
PKNOX2Q96KN3 Y_RNA.97-201ENST00000363094 102 ntBASIC1.98□□□□□ -2.09
PKNOX2Q96KN3 RNU6-511P-201ENST00000363496 107 ntBASIC1.98□□□□□ -2.09
PKNOX2Q96KN3 RNU6-288P-201ENST00000363690 104 ntBASIC1.98□□□□□ -2.09
PKNOX2Q96KN3 SNORD48-201ENST00000364953 64 ntBASIC1.98□□□□□ -2.09
PKNOX2Q96KN3 Z98749.2-208ENST00000381646 500 ntBASIC1.98□□□□□ -2.09
PKNOX2Q96KN3 BTF3L4P2-201ENST00000392798 346 ntBASIC1.98□□□□□ -2.09
PKNOX2Q96KN3 AL023284.1-201ENST00000403956 276 ntBASIC1.98□□□□□ -2.09
PKNOX2Q96KN3 OR51A5P-201ENST00000415429 942 ntBASIC1.98□□□□□ -2.09
PKNOX2Q96KN3 AL353621.1-201ENST00000418219 243 ntBASIC1.98□□□□□ -2.09
PKNOX2Q96KN3 AL353777.1-201ENST00000425552 326 ntBASIC1.98□□□□□ -2.09
PKNOX2Q96KN3 KRTAP19-11P-201ENST00000439851 104 ntBASIC1.98□□□□□ -2.09
PKNOX2Q96KN3 LINC01594-201ENST00000445083 611 ntTSL 5 BASIC1.98□□□□□ -2.09
PKNOX2Q96KN3 AC092001.1-201ENST00000453012 261 ntBASIC1.98□□□□□ -2.09
PKNOX2Q96KN3 OARD1-209ENST00000471367 401 ntTSL 2 BASIC1.98□□□□□ -2.09
PKNOX2Q96KN3 MTND1P3-201ENST00000484956 952 ntBASIC1.98□□□□□ -2.09
PKNOX2Q96KN3 RPL36AP48-201ENST00000485521 314 ntBASIC1.98□□□□□ -2.09
PKNOX2Q96KN3 AC010261.1-201ENST00000514411 457 ntTSL 5 BASIC1.98□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 119.6 ms