Protein–RNA interactions for Protein: Q96HJ5

MS4A3, Membrane-spanning 4-domains subfamily A member 3, humanhuman

Predictions only

Length 214 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MS4A3Q96HJ5 U3.3-201ENST00000362986 216 ntBASIC5.39□□□□□ -1.55
MS4A3Q96HJ5 GPS2P1-201ENST00000411761 986 ntBASIC5.39□□□□□ -1.55
MS4A3Q96HJ5 KRTAP2-5P-201ENST00000446109 396 ntBASIC5.39□□□□□ -1.55
MS4A3Q96HJ5 RNU1-131P-201ENST00000458943 161 ntBASIC5.39□□□□□ -1.55
MS4A3Q96HJ5 RN7SL254P-201ENST00000460609 284 ntBASIC5.39□□□□□ -1.55
MS4A3Q96HJ5 RN7SL168P-201ENST00000463821 279 ntBASIC5.39□□□□□ -1.55
MS4A3Q96HJ5 AC136777.2-201ENST00000522979 358 ntBASIC5.39□□□□□ -1.55
MS4A3Q96HJ5 AC087741.2-201ENST00000619415 172 ntBASIC5.39□□□□□ -1.55
MS4A3Q96HJ5 AC006065.5-201ENST00000623427 349 ntBASIC5.39□□□□□ -1.55
MS4A3Q96HJ5 CASC1-201ENST00000320267 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC5.39□□□□□ -1.55
MS4A3Q96HJ5 AC100800.1-201ENST00000524252 2054 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
MS4A3Q96HJ5 DTNA-229ENST00000598142 2509 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
MS4A3Q96HJ5 ECT2L-205ENST00000541398 4483 ntAPPRIS P1 TSL 5 BASIC5.39□□□□□ -1.55
MS4A3Q96HJ5 AC005332.5-201ENST00000591222 2919 ntBASIC5.39□□□□□ -1.55
MS4A3Q96HJ5 C3orf67-209ENST00000482387 2617 ntTSL 5 BASIC5.39□□□□□ -1.55
MS4A3Q96HJ5 PTPN3-202ENST00000374541 6703 ntAPPRIS P1 TSL 5 BASIC5.39□□□□□ -1.55
MS4A3Q96HJ5 DSC2-202ENST00000280904 12325 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
MS4A3Q96HJ5 GDA-209ENST00000545168 5362 ntTSL 2 BASIC5.38□□□□□ -1.55
MS4A3Q96HJ5 MDN1-201ENST00000369393 18413 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
MS4A3Q96HJ5 AC125336.1-201ENST00000508893 2827 ntBASIC5.38□□□□□ -1.55
MS4A3Q96HJ5 TTN-AS1-203ENST00000419746 4592 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
MS4A3Q96HJ5 CUL2-209ENST00000537177 4271 ntTSL 5 BASIC5.38□□□□□ -1.55
MS4A3Q96HJ5 ZNF227-208ENST00000589005 2943 ntTSL 2 BASIC5.38□□□□□ -1.55
MS4A3Q96HJ5 AL034549.2-201ENST00000618285 3373 ntBASIC5.38□□□□□ -1.55
MS4A3Q96HJ5 CCDC66-201ENST00000326595 3027 ntAPPRIS P3 TSL 1 (best) BASIC5.38□□□□□ -1.55
MS4A3Q96HJ5 AC026241.1-201ENST00000517873 2142 ntBASIC5.38□□□□□ -1.55
MS4A3Q96HJ5 OR5AS1-202ENST00000641320 7860 ntAPPRIS P1 BASIC5.38□□□□□ -1.55
MS4A3Q96HJ5 SYTL2-203ENST00000359152 4123 ntAPPRIS ALT1 TSL 1 (best) BASIC5.38□□□□□ -1.55
MS4A3Q96HJ5 RNMT-201ENST00000262173 6051 ntAPPRIS P1 TSL 2 BASIC5.38□□□□□ -1.55
MS4A3Q96HJ5 OR9K1P-202ENST00000641111 3217 ntBASIC5.38□□□□□ -1.55
MS4A3Q96HJ5 SNORD115-19-201ENST00000363098 82 ntBASIC5.38□□□□□ -1.55
MS4A3Q96HJ5 SNORD115-18-201ENST00000363293 82 ntBASIC5.38□□□□□ -1.55
MS4A3Q96HJ5 RNU1-96P-201ENST00000364163 162 ntBASIC5.38□□□□□ -1.55
MS4A3Q96HJ5 RNU6-335P-201ENST00000364563 113 ntBASIC5.38□□□□□ -1.55
MS4A3Q96HJ5 SNORD115-17-201ENST00000364612 82 ntBASIC5.38□□□□□ -1.55
MS4A3Q96HJ5 Y_RNA.410-201ENST00000383992 113 ntBASIC5.38□□□□□ -1.55
MS4A3Q96HJ5 SNORD14D-201ENST00000384390 87 ntBASIC5.38□□□□□ -1.55
MS4A3Q96HJ5 RNU6-178P-201ENST00000384631 104 ntBASIC5.38□□□□□ -1.55
MS4A3Q96HJ5 MIR518F-201ENST00000384973 87 ntBASIC5.38□□□□□ -1.55
MS4A3Q96HJ5 AL121885.3-201ENST00000422833 115 ntTSL 3 BASIC5.38□□□□□ -1.55
MS4A3Q96HJ5 AC009414.1-201ENST00000427200 443 ntBASIC5.38□□□□□ -1.55
MS4A3Q96HJ5 AC084121.1-201ENST00000533882 835 ntBASIC5.38□□□□□ -1.55
MS4A3Q96HJ5 RNU4ATAC-201ENST00000580972 127 ntBASIC5.38□□□□□ -1.55
MS4A3Q96HJ5 MIR4433B-201ENST00000581329 102 ntBASIC5.38□□□□□ -1.55
MS4A3Q96HJ5 AC124916.2-201ENST00000604416 224 ntBASIC5.38□□□□□ -1.55
MS4A3Q96HJ5 Metazoa_SRP.94-201ENST00000612609 250 ntBASIC5.38□□□□□ -1.55
MS4A3Q96HJ5 U7.4-201ENST00000614961 63 ntBASIC5.38□□□□□ -1.55
MS4A3Q96HJ5 AL591926.1-201ENST00000620542 217 ntBASIC5.38□□□□□ -1.55
MS4A3Q96HJ5 SEC31A-201ENST00000264405 3447 ntTSL 2 BASIC5.38□□□□□ -1.55
MS4A3Q96HJ5 USP16-201ENST00000334352 3004 ntAPPRIS P3 TSL 5 BASIC5.38□□□□□ -1.55
MS4A3Q96HJ5 IL33-203ENST00000456383 2501 ntTSL 5 BASIC5.38□□□□□ -1.55
MS4A3Q96HJ5 OR2AT4-204ENST00000641593 8733 ntAPPRIS P1 BASIC5.38□□□□□ -1.55
MS4A3Q96HJ5 PIGN-241ENST00000640050 3154 ntAPPRIS P1 TSL 5 BASIC5.38□□□□□ -1.55
MS4A3Q96HJ5 DYTN-201ENST00000452335 2051 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
MS4A3Q96HJ5 RBM5-214ENST00000469838 2716 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
MS4A3Q96HJ5 MID1-206ENST00000380787 5973 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
MS4A3Q96HJ5 PPP1R12A-204ENST00000546369 2977 ntTSL 2 BASIC5.37□□□□□ -1.55
MS4A3Q96HJ5 OR2A12-202ENST00000641592 4163 ntAPPRIS P1 BASIC5.37□□□□□ -1.55
MS4A3Q96HJ5 DZIP3-202ENST00000463306 4246 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
MS4A3Q96HJ5 RYR3-202ENST00000415757 15557 ntAPPRIS ALT2 TSL 2 BASIC5.37□□□□□ -1.55
MS4A3Q96HJ5 LRRTM4-201ENST00000409088 3616 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
MS4A3Q96HJ5 FOCAD-202ENST00000380249 6096 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
MS4A3Q96HJ5 RNU6-633P-201ENST00000362612 103 ntBASIC5.37□□□□□ -1.55
MS4A3Q96HJ5 RNU4-67P-201ENST00000364569 141 ntBASIC5.37□□□□□ -1.55
MS4A3Q96HJ5 RN7SKP187-201ENST00000365536 330 ntBASIC5.37□□□□□ -1.55
MS4A3Q96HJ5 Y_RNA.377-201ENST00000365644 108 ntBASIC5.37□□□□□ -1.55
MS4A3Q96HJ5 S100A5-201ENST00000368717 506 ntAPPRIS P1 TSL 3 BASIC5.37□□□□□ -1.55
MS4A3Q96HJ5 RNA5SP431-201ENST00000410312 120 ntBASIC5.37□□□□□ -1.55
MS4A3Q96HJ5 RNU2-49P-201ENST00000410666 184 ntBASIC5.37□□□□□ -1.55
MS4A3Q96HJ5 CYCSP19-201ENST00000411715 316 ntBASIC5.37□□□□□ -1.55
MS4A3Q96HJ5 AC007738.1-201ENST00000413892 348 ntBASIC5.37□□□□□ -1.55
MS4A3Q96HJ5 AC109779.1-201ENST00000414475 573 ntTSL 5 BASIC5.37□□□□□ -1.55
MS4A3Q96HJ5 LINC01638-201ENST00000418271 552 ntTSL 3 BASIC5.37□□□□□ -1.55
MS4A3Q96HJ5 AC125388.1-201ENST00000459631 156 ntBASIC5.37□□□□□ -1.55
MS4A3Q96HJ5 AC009127.1-201ENST00000467090 155 ntBASIC5.37□□□□□ -1.55
MS4A3Q96HJ5 AC090602.1-201ENST00000469695 252 ntBASIC5.37□□□□□ -1.55
MS4A3Q96HJ5 MIR4701-201ENST00000583094 63 ntBASIC5.37□□□□□ -1.55
MS4A3Q96HJ5 AC005726.5-201ENST00000585189 298 ntTSL 5 BASIC5.37□□□□□ -1.55
MS4A3Q96HJ5 RNU6-91P-201ENST00000607774 107 ntBASIC5.37□□□□□ -1.55
MS4A3Q96HJ5 MIR7109-201ENST00000613748 65 ntBASIC5.37□□□□□ -1.55
MS4A3Q96HJ5 AL137067.2-201ENST00000621202 131 ntBASIC5.37□□□□□ -1.55
MS4A3Q96HJ5 AC091564.4-201ENST00000533934 2194 ntBASIC5.37□□□□□ -1.55
MS4A3Q96HJ5 ZNF615-213ENST00000602063 4094 ntAPPRIS P3 TSL 5 BASIC5.37□□□□□ -1.55
MS4A3Q96HJ5 SLC12A6-218ENST00000560611 4239 ntAPPRIS ALT1 TSL 1 (best) BASIC5.37□□□□□ -1.55
MS4A3Q96HJ5 AC004656.1-201ENST00000568479 4951 ntBASIC5.37□□□□□ -1.55
MS4A3Q96HJ5 OR52A5-201ENST00000307388 3973 ntAPPRIS P1 BASIC5.37□□□□□ -1.55
MS4A3Q96HJ5 OR52A5-202ENST00000642125 3993 ntAPPRIS P1 BASIC5.37□□□□□ -1.55
MS4A3Q96HJ5 CSDE1-202ENST00000339438 4006 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
MS4A3Q96HJ5 PTPRC-209ENST00000442510 5164 ntAPPRIS P4 TSL 1 (best) BASIC5.37□□□□□ -1.55
MS4A3Q96HJ5 DPP8-210ENST00000559233 2953 ntAPPRIS P4 TSL 2 BASIC5.37□□□□□ -1.55
MS4A3Q96HJ5 PSD3-202ENST00000327040 11689 ntAPPRIS ALT2 TSL 1 (best) BASIC5.37□□□□□ -1.55
MS4A3Q96HJ5 RAD17-220ENST00000616683 3057 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
MS4A3Q96HJ5 HAUS3-201ENST00000243706 5620 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
MS4A3Q96HJ5 STYX-202ENST00000442123 4554 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
MS4A3Q96HJ5 TUG1-202ENST00000521091 2110 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
MS4A3Q96HJ5 ATP13A4-202ENST00000342695 4208 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
MS4A3Q96HJ5 PARP4P2-201ENST00000446672 3326 ntBASIC5.36□□□□□ -1.55
MS4A3Q96HJ5 RNA5SP375-201ENST00000362975 119 ntBASIC5.36□□□□□ -1.55
MS4A3Q96HJ5 Y_RNA.242-201ENST00000364473 110 ntBASIC5.36□□□□□ -1.55
MS4A3Q96HJ5 SNORA11B-201ENST00000408175 129 ntBASIC5.36□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 103 ms