Protein–RNA interactions for Protein: Q96CF2

CHMP4C, Charged multivesicular body protein 4c, humanhuman

Predictions only

Length 233 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4CQ96CF2 AC117465.1-201ENST00000457125 522 ntTSL 3 BASIC3.83□□□□□ -1.8
CHMP4CQ96CF2 AC126121.2-201ENST00000486137 698 ntTSL 3 BASIC3.83□□□□□ -1.8
CHMP4CQ96CF2 RPS27AP10-201ENST00000496103 208 ntBASIC3.83□□□□□ -1.8
CHMP4CQ96CF2 AC026801.1-201ENST00000497178 464 ntBASIC3.83□□□□□ -1.8
CHMP4CQ96CF2 LINC02110-201ENST00000503870 546 ntTSL 3 BASIC3.83□□□□□ -1.8
CHMP4CQ96CF2 AC110794.1-201ENST00000505816 425 ntBASIC3.83□□□□□ -1.8
CHMP4CQ96CF2 AC114786.4-201ENST00000508771 728 ntBASIC3.83□□□□□ -1.8
CHMP4CQ96CF2 AC010486.1-201ENST00000511793 424 ntBASIC3.83□□□□□ -1.8
CHMP4CQ96CF2 RNU1-86P-201ENST00000516108 154 ntBASIC3.83□□□□□ -1.8
CHMP4CQ96CF2 RNU1-107P-201ENST00000516617 154 ntBASIC3.83□□□□□ -1.8
CHMP4CQ96CF2 RNU6-1314P-201ENST00000517139 104 ntBASIC3.83□□□□□ -1.8
CHMP4CQ96CF2 BTF3P12-201ENST00000519620 469 ntBASIC3.83□□□□□ -1.8
CHMP4CQ96CF2 CYCSP27-201ENST00000527643 293 ntBASIC3.83□□□□□ -1.8
CHMP4CQ96CF2 AC092747.1-202ENST00000540595 380 ntTSL 5 BASIC3.83□□□□□ -1.8
CHMP4CQ96CF2 AL121579.1-201ENST00000555129 305 ntBASIC3.83□□□□□ -1.8
CHMP4CQ96CF2 AC002044.1-201ENST00000606707 158 ntBASIC3.83□□□□□ -1.8
CHMP4CQ96CF2 ATP5A1P2-202ENST00000616464 443 ntBASIC3.83□□□□□ -1.8
CHMP4CQ96CF2 RMST_4.1-201ENST00000616886 107 ntBASIC3.83□□□□□ -1.8
CHMP4CQ96CF2 PROX1-AS1-244ENST00000630355 599 ntTSL 5 BASIC3.83□□□□□ -1.8
CHMP4CQ96CF2 RICTOR-201ENST00000296782 7505 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
CHMP4CQ96CF2 FILIP1L-206ENST00000471562 2854 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
CHMP4CQ96CF2 SHOC2-201ENST00000265277 3691 ntTSL 2 BASIC3.83□□□□□ -1.8
CHMP4CQ96CF2 CCDC82-201ENST00000278520 2941 ntAPPRIS P2 TSL 5 BASIC3.82□□□□□ -1.8
CHMP4CQ96CF2 AC103988.1-201ENST00000566382 2177 ntBASIC3.82□□□□□ -1.8
CHMP4CQ96CF2 ESF1-202ENST00000617257 1470 ntTSL 5 BASIC3.82□□□□□ -1.8
CHMP4CQ96CF2 RNU6-266P-201ENST00000364225 107 ntBASIC3.82□□□□□ -1.8
CHMP4CQ96CF2 AL022329.2-201ENST00000413494 660 ntTSL 5 BASIC3.82□□□□□ -1.8
CHMP4CQ96CF2 HIGD1AP11-201ENST00000438361 280 ntBASIC3.82□□□□□ -1.8
CHMP4CQ96CF2 MTCO2P3-201ENST00000442543 421 ntBASIC3.82□□□□□ -1.8
CHMP4CQ96CF2 AL360091.2-201ENST00000446847 650 ntTSL 5 BASIC3.82□□□□□ -1.8
CHMP4CQ96CF2 RNU7-23P-201ENST00000459465 62 ntBASIC3.82□□□□□ -1.8
CHMP4CQ96CF2 AP000852.1-201ENST00000472460 573 ntBASIC3.82□□□□□ -1.8
CHMP4CQ96CF2 AC011005.2-201ENST00000487324 359 ntBASIC3.82□□□□□ -1.8
CHMP4CQ96CF2 SNORA14.1-201ENST00000516113 141 ntBASIC3.82□□□□□ -1.8
CHMP4CQ96CF2 SNORD59.2-201ENST00000516873 68 ntBASIC3.82□□□□□ -1.8
CHMP4CQ96CF2 SNORA20.3-201ENST00000516880 132 ntBASIC3.82□□□□□ -1.8
CHMP4CQ96CF2 APAF1-207ENST00000547743 651 ntTSL 3 BASIC3.82□□□□□ -1.8
CHMP4CQ96CF2 AC127024.3-201ENST00000582841 460 ntTSL 3 BASIC3.82□□□□□ -1.8
CHMP4CQ96CF2 AC011477.3-201ENST00000585571 403 ntTSL 5 BASIC3.82□□□□□ -1.8
CHMP4CQ96CF2 HMGN2P15-201ENST00000585707 270 ntBASIC3.82□□□□□ -1.8
CHMP4CQ96CF2 AC098617.1-215ENST00000594798 1152 ntTSL 5 BASIC3.82□□□□□ -1.8
CHMP4CQ96CF2 AC012493.2-201ENST00000595083 291 ntBASIC3.82□□□□□ -1.8
CHMP4CQ96CF2 BNIP3P25-201ENST00000596023 559 ntBASIC3.82□□□□□ -1.8
CHMP4CQ96CF2 AC005000.2-201ENST00000605468 310 ntBASIC3.82□□□□□ -1.8
CHMP4CQ96CF2 ESRRAP2-204ENST00000606337 280 ntTSL 5 BASIC3.82□□□□□ -1.8
CHMP4CQ96CF2 DAOA-AS1_2.1-201ENST00000614829 187 ntBASIC3.82□□□□□ -1.8
CHMP4CQ96CF2 AL136221.1-201ENST00000621449 509 ntBASIC3.82□□□□□ -1.8
CHMP4CQ96CF2 NBPF20-202ENST00000392971 18450 ntAPPRIS P2 TSL 5 BASIC3.82□□□□□ -1.8
CHMP4CQ96CF2 TUSC7-203ENST00000477539 2415 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
CHMP4CQ96CF2 RNU1-101P-201ENST00000391171 127 ntBASIC3.81□□□□□ -1.8
CHMP4CQ96CF2 AL592148.1-201ENST00000413568 445 ntBASIC3.81□□□□□ -1.8
CHMP4CQ96CF2 NDUFB4P5-201ENST00000415445 361 ntBASIC3.81□□□□□ -1.8
CHMP4CQ96CF2 ELF3-AS1-201ENST00000415582 500 ntTSL 2 BASIC3.81□□□□□ -1.8
CHMP4CQ96CF2 AL589987.2-201ENST00000417426 582 ntTSL 2 BASIC3.81□□□□□ -1.8
CHMP4CQ96CF2 USP9YP20-201ENST00000419224 558 ntBASIC3.81□□□□□ -1.8
CHMP4CQ96CF2 AL355989.1-202ENST00000419406 408 ntTSL 3 BASIC3.81□□□□□ -1.8
CHMP4CQ96CF2 AL513365.2-201ENST00000423060 529 ntTSL 2 BASIC3.81□□□□□ -1.8
CHMP4CQ96CF2 AC007271.1-201ENST00000428188 382 ntTSL 3 BASIC3.81□□□□□ -1.8
CHMP4CQ96CF2 AL033504.1-204ENST00000434985 413 ntTSL 2 BASIC3.81□□□□□ -1.8
CHMP4CQ96CF2 RPL7P12-201ENST00000446719 750 ntBASIC3.81□□□□□ -1.8
CHMP4CQ96CF2 MTCO2P30-201ENST00000503662 364 ntBASIC3.81□□□□□ -1.8
CHMP4CQ96CF2 AC099499.1-201ENST00000505040 558 ntTSL 3 BASIC3.81□□□□□ -1.8
CHMP4CQ96CF2 PKIA-203ENST00000518467 588 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
CHMP4CQ96CF2 AF279873.4-202ENST00000521714 511 ntTSL 2 BASIC3.81□□□□□ -1.8
CHMP4CQ96CF2 AC091944.1-201ENST00000521984 449 ntTSL 3 BASIC3.81□□□□□ -1.8
CHMP4CQ96CF2 OR56A5-202ENST00000532411 942 ntAPPRIS P1 BASIC3.81□□□□□ -1.8
CHMP4CQ96CF2 PSMA3P-201ENST00000555485 635 ntBASIC3.81□□□□□ -1.8
CHMP4CQ96CF2 LPP-221ENST00000618621 18277 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
CHMP4CQ96CF2 HOTAIRM1_5.1-201ENST00000619311 145 ntBASIC3.81□□□□□ -1.8
CHMP4CQ96CF2 MIR8057-201ENST00000620957 69 ntBASIC3.81□□□□□ -1.8
CHMP4CQ96CF2 AC091903.1-201ENST00000624322 454 ntBASIC3.81□□□□□ -1.8
CHMP4CQ96CF2 LPP-222ENST00000640853 18277 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
CHMP4CQ96CF2 OR13G1-202ENST00000642119 2568 ntAPPRIS P1 BASIC3.81□□□□□ -1.8
CHMP4CQ96CF2 THEMIS-201ENST00000368248 3866 ntAPPRIS P3 TSL 1 (best) BASIC3.81□□□□□ -1.8
CHMP4CQ96CF2 AC010680.1-201ENST00000590024 3590 ntBASIC3.8□□□□□ -1.8
CHMP4CQ96CF2 SNORA72.1-201ENST00000363485 129 ntBASIC3.8□□□□□ -1.8
CHMP4CQ96CF2 SNORD113-7-201ENST00000363762 77 ntBASIC3.8□□□□□ -1.8
CHMP4CQ96CF2 U3.12-201ENST00000364498 214 ntBASIC3.8□□□□□ -1.8
CHMP4CQ96CF2 Y_RNA.324-201ENST00000365165 102 ntBASIC3.8□□□□□ -1.8
CHMP4CQ96CF2 RNY3P14-201ENST00000384309 102 ntBASIC3.8□□□□□ -1.8
CHMP4CQ96CF2 RNU2-3P-201ENST00000410144 191 ntBASIC3.8□□□□□ -1.8
CHMP4CQ96CF2 RNA5SP229-201ENST00000410809 99 ntBASIC3.8□□□□□ -1.8
CHMP4CQ96CF2 Z92545.1-201ENST00000411782 234 ntBASIC3.8□□□□□ -1.8
CHMP4CQ96CF2 CYCSP33-201ENST00000414485 327 ntBASIC3.8□□□□□ -1.8
CHMP4CQ96CF2 PGBD4P6-201ENST00000421501 610 ntBASIC3.8□□□□□ -1.8
CHMP4CQ96CF2 AC006028.1-201ENST00000438379 402 ntBASIC3.8□□□□□ -1.8
CHMP4CQ96CF2 AC098614.3-201ENST00000438957 440 ntBASIC3.8□□□□□ -1.8
CHMP4CQ96CF2 AL714022.1-201ENST00000439897 151 ntBASIC3.8□□□□□ -1.8
CHMP4CQ96CF2 BTF3P15-201ENST00000455606 336 ntBASIC3.8□□□□□ -1.8
CHMP4CQ96CF2 RN7SL807P-201ENST00000470923 297 ntBASIC3.8□□□□□ -1.8
CHMP4CQ96CF2 AC121154.1-201ENST00000507299 430 ntTSL 3 BASIC3.8□□□□□ -1.8
CHMP4CQ96CF2 SNORA31.21-201ENST00000517180 77 ntBASIC3.8□□□□□ -1.8
CHMP4CQ96CF2 AC136777.1-201ENST00000517765 369 ntTSL 4 BASIC3.8□□□□□ -1.8
CHMP4CQ96CF2 AL121821.1-201ENST00000557067 530 ntTSL 3 BASIC3.8□□□□□ -1.8
CHMP4CQ96CF2 CYCSP39-201ENST00000565821 309 ntBASIC3.8□□□□□ -1.8
CHMP4CQ96CF2 AC005730.3-201ENST00000583067 366 ntBASIC3.8□□□□□ -1.8
CHMP4CQ96CF2 YPEL5P2-201ENST00000605553 359 ntBASIC3.8□□□□□ -1.8
CHMP4CQ96CF2 IKZF2-213ENST00000457361 9350 ntTSL 5 BASIC3.8□□□□□ -1.8
CHMP4CQ96CF2 AKAP9-202ENST00000358100 10309 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
CHMP4CQ96CF2 PMS1-215ENST00000447232 2576 ntTSL 2 BASIC3.8□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 116.5 ms