Protein–RNA interactions for Protein: Q96B97

SH3KBP1, SH3 domain-containing kinase-binding protein 1, humanhuman

Predictions only

Length 665 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH3KBP1Q96B97 AC026801.1-201ENST00000497178 464 ntBASIC3.17□□□□□ -1.9
SH3KBP1Q96B97 AC097375.2-201ENST00000510416 579 ntTSL 5 BASIC3.17□□□□□ -1.9
SH3KBP1Q96B97 AC013799.1-201ENST00000531157 348 ntTSL 2 BASIC3.17□□□□□ -1.9
SH3KBP1Q96B97 AL138976.2-201ENST00000563989 694 ntBASIC3.17□□□□□ -1.9
SH3KBP1Q96B97 MIR4298-201ENST00000584380 73 ntBASIC3.17□□□□□ -1.9
SH3KBP1Q96B97 ATP1B3P1-201ENST00000605365 821 ntBASIC3.17□□□□□ -1.9
SH3KBP1Q96B97 RPL23AP88-201ENST00000605759 454 ntBASIC3.17□□□□□ -1.9
SH3KBP1Q96B97 AC104458.1-201ENST00000608243 463 ntBASIC3.17□□□□□ -1.9
SH3KBP1Q96B97 AC002553.4-201ENST00000616896 331 ntBASIC3.17□□□□□ -1.9
SH3KBP1Q96B97 AC105265.4-201ENST00000618391 306 ntTSL 5 BASIC3.17□□□□□ -1.9
SH3KBP1Q96B97 AC159540.2-206ENST00000619371 355 ntTSL 3 BASIC3.17□□□□□ -1.9
SH3KBP1Q96B97 SCARNA15.3-201ENST00000626315 122 ntBASIC3.17□□□□□ -1.9
SH3KBP1Q96B97 SCARNA4.1-201ENST00000628597 123 ntBASIC3.17□□□□□ -1.9
SH3KBP1Q96B97 CFH-202ENST00000367429 4127 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
SH3KBP1Q96B97 AC093536.2-201ENST00000565257 1406 ntBASIC3.17□□□□□ -1.9
SH3KBP1Q96B97 SMARCAD1-206ENST00000509418 2348 ntTSL 2 BASIC3.16□□□□□ -1.9
SH3KBP1Q96B97 KBTBD3-207ENST00000534815 3396 ntTSL 5 BASIC3.16□□□□□ -1.9
SH3KBP1Q96B97 ZBTB26-202ENST00000373656 4443 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
SH3KBP1Q96B97 RNA5SP219-201ENST00000390940 113 ntBASIC3.16□□□□□ -1.9
SH3KBP1Q96B97 RNU6-332P-201ENST00000391193 108 ntBASIC3.16□□□□□ -1.9
SH3KBP1Q96B97 Y_RNA.615-201ENST00000410769 117 ntBASIC3.16□□□□□ -1.9
SH3KBP1Q96B97 AL451060.1-203ENST00000431307 362 ntTSL 3 BASIC3.16□□□□□ -1.9
SH3KBP1Q96B97 BRK1P2-201ENST00000442875 223 ntBASIC3.16□□□□□ -1.9
SH3KBP1Q96B97 PRPS1P1-201ENST00000445305 876 ntBASIC3.16□□□□□ -1.9
SH3KBP1Q96B97 AL441989.1-201ENST00000454204 382 ntTSL 3 BASIC3.16□□□□□ -1.9
SH3KBP1Q96B97 AL024497.2-201ENST00000457081 317 ntTSL 3 BASIC3.16□□□□□ -1.9
SH3KBP1Q96B97 RPL31P41-201ENST00000477967 372 ntBASIC3.16□□□□□ -1.9
SH3KBP1Q96B97 RN7SL504P-201ENST00000494496 287 ntBASIC3.16□□□□□ -1.9
SH3KBP1Q96B97 RNU2-69P-201ENST00000516061 100 ntBASIC3.16□□□□□ -1.9
SH3KBP1Q96B97 RNU1-86P-201ENST00000516108 154 ntBASIC3.16□□□□□ -1.9
SH3KBP1Q96B97 RNU1-107P-201ENST00000516617 154 ntBASIC3.16□□□□□ -1.9
SH3KBP1Q96B97 SNORD60.2-201ENST00000516883 86 ntBASIC3.16□□□□□ -1.9
SH3KBP1Q96B97 RNU6-1183P-201ENST00000517054 60 ntBASIC3.16□□□□□ -1.9
SH3KBP1Q96B97 AC104027.1-201ENST00000521887 300 ntBASIC3.16□□□□□ -1.9
SH3KBP1Q96B97 OR56A5-202ENST00000532411 942 ntAPPRIS P1 BASIC3.16□□□□□ -1.9
SH3KBP1Q96B97 AL133241.1-201ENST00000556832 487 ntBASIC3.16□□□□□ -1.9
SH3KBP1Q96B97 AC005909.1-201ENST00000577835 755 ntTSL 3 BASIC3.16□□□□□ -1.9
SH3KBP1Q96B97 MIR4782-201ENST00000577987 79 ntBASIC3.16□□□□□ -1.9
SH3KBP1Q96B97 SNORA59B-202ENST00000578183 701 ntBASIC3.16□□□□□ -1.9
SH3KBP1Q96B97 MIR4424-201ENST00000585257 86 ntBASIC3.16□□□□□ -1.9
SH3KBP1Q96B97 HIKESHI-208ENST00000618164 499 ntTSL 5 BASIC3.16□□□□□ -1.9
SH3KBP1Q96B97 AC004520.1-201ENST00000608362 1413 ntBASIC3.16□□□□□ -1.9
SH3KBP1Q96B97 HDX-201ENST00000297977 6200 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
SH3KBP1Q96B97 MUC7-202ENST00000413702 2540 ntAPPRIS P2 TSL 4 BASIC3.16□□□□□ -1.9
SH3KBP1Q96B97 LPP-221ENST00000618621 18277 ntTSL 1 (best) BASIC3.15□□□□□ -1.9
SH3KBP1Q96B97 LPP-222ENST00000640853 18277 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.9
SH3KBP1Q96B97 MARCH7-202ENST00000409175 2402 ntAPPRIS P1 TSL 2 BASIC3.15□□□□□ -1.9
SH3KBP1Q96B97 FPGT-TNNI3K-202ENST00000370895 7566 ntTSL 2 BASIC3.15□□□□□ -1.9
SH3KBP1Q96B97 PIK3C2G-202ENST00000433979 4840 ntAPPRIS P1 TSL 5 BASIC3.15□□□□□ -1.9
SH3KBP1Q96B97 AL161431.1-201ENST00000618966 4205 ntBASIC3.15□□□□□ -1.91
SH3KBP1Q96B97 ZBTB8OSP1-201ENST00000342688 498 ntBASIC3.15□□□□□ -1.91
SH3KBP1Q96B97 RNU1-70P-201ENST00000362618 164 ntBASIC3.15□□□□□ -1.91
SH3KBP1Q96B97 Y_RNA.373-201ENST00000365600 103 ntBASIC3.15□□□□□ -1.91
SH3KBP1Q96B97 RNU6-166P-201ENST00000384371 107 ntBASIC3.15□□□□□ -1.91
SH3KBP1Q96B97 RNU6-434P-201ENST00000384376 107 ntBASIC3.15□□□□□ -1.91
SH3KBP1Q96B97 TRAJ21-201ENST00000390516 55 ntAPPRIS P1 BASIC3.15□□□□□ -1.91
SH3KBP1Q96B97 SNORA40C-201ENST00000391285 128 ntBASIC3.15□□□□□ -1.91
SH3KBP1Q96B97 AL592148.1-201ENST00000413568 445 ntBASIC3.15□□□□□ -1.91
SH3KBP1Q96B97 BX682237.1-201ENST00000415016 335 ntBASIC3.15□□□□□ -1.91
SH3KBP1Q96B97 MTND1P2-201ENST00000430604 821 ntBASIC3.15□□□□□ -1.91
SH3KBP1Q96B97 MYL8P-204ENST00000431574 518 ntBASIC3.15□□□□□ -1.91
SH3KBP1Q96B97 RPL21P2-201ENST00000440049 481 ntBASIC3.15□□□□□ -1.91
SH3KBP1Q96B97 AL078601.1-201ENST00000444542 271 ntBASIC3.15□□□□□ -1.91
SH3KBP1Q96B97 LINC01774-201ENST00000453569 595 ntTSL 2 BASIC3.15□□□□□ -1.91
SH3KBP1Q96B97 AC233279.1-201ENST00000455300 423 ntBASIC3.15□□□□□ -1.91
SH3KBP1Q96B97 LINC00971-201ENST00000482721 535 ntTSL 2 BASIC3.15□□□□□ -1.91
SH3KBP1Q96B97 AC092944.1-205ENST00000494885 517 ntTSL 4 BASIC3.15□□□□□ -1.91
SH3KBP1Q96B97 AC104136.1-201ENST00000512969 394 ntBASIC3.15□□□□□ -1.91
SH3KBP1Q96B97 VTRNA2-2P-201ENST00000516091 103 ntBASIC3.15□□□□□ -1.91
SH3KBP1Q96B97 SNORA64.4-201ENST00000516632 81 ntBASIC3.15□□□□□ -1.91
SH3KBP1Q96B97 RNU6-703P-201ENST00000516946 107 ntBASIC3.15□□□□□ -1.91
SH3KBP1Q96B97 AC025524.1-201ENST00000518489 606 ntTSL 4 BASIC3.15□□□□□ -1.91
SH3KBP1Q96B97 IL7-206ENST00000520269 456 ntTSL 3 BASIC3.15□□□□□ -1.91
SH3KBP1Q96B97 MRPL51-203ENST00000538814 501 ntTSL 2 BASIC3.15□□□□□ -1.91
SH3KBP1Q96B97 SARNP-203ENST00000552080 726 ntTSL 2 BASIC3.15□□□□□ -1.91
SH3KBP1Q96B97 AL645944.1-201ENST00000603857 493 ntBASIC3.15□□□□□ -1.91
SH3KBP1Q96B97 AL020991.1-201ENST00000612314 373 ntBASIC3.15□□□□□ -1.91
SH3KBP1Q96B97 C8orf59-212ENST00000615697 483 ntAPPRIS P1 TSL 2 BASIC3.15□□□□□ -1.91
SH3KBP1Q96B97 C9orf153-205ENST00000617985 333 ntAPPRIS ALT2 TSL 5 BASIC3.15□□□□□ -1.91
SH3KBP1Q96B97 AC100810.6-201ENST00000638068 285 ntBASIC3.15□□□□□ -1.91
SH3KBP1Q96B97 TFEC-203ENST00000393485 2704 ntTSL 2 BASIC3.15□□□□□ -1.91
SH3KBP1Q96B97 CATSPERB-201ENST00000256343 3623 ntAPPRIS P2 TSL 1 (best) BASIC3.14□□□□□ -1.91
SH3KBP1Q96B97 OR5V1-217ENST00000641768 2763 ntAPPRIS P1 BASIC3.14□□□□□ -1.91
SH3KBP1Q96B97 KLRA1P-202ENST00000510134 1410 ntTSL 5 BASIC3.14□□□□□ -1.91
SH3KBP1Q96B97 SNORD56.3-201ENST00000363507 71 ntBASIC3.14□□□□□ -1.91
SH3KBP1Q96B97 RNU6-898P-201ENST00000365627 104 ntBASIC3.14□□□□□ -1.91
SH3KBP1Q96B97 IARS-201ENST00000375627 697 ntTSL 3 BASIC3.14□□□□□ -1.91
SH3KBP1Q96B97 MIR10A-201ENST00000385043 110 ntBASIC3.14□□□□□ -1.91
SH3KBP1Q96B97 RNU2-49P-201ENST00000410666 184 ntBASIC3.14□□□□□ -1.91
SH3KBP1Q96B97 Y_RNA.623-201ENST00000411128 95 ntBASIC3.14□□□□□ -1.91
SH3KBP1Q96B97 AC096664.2-201ENST00000411843 406 ntBASIC3.14□□□□□ -1.91
SH3KBP1Q96B97 AL500522.1-201ENST00000423667 318 ntTSL 3 BASIC3.14□□□□□ -1.91
SH3KBP1Q96B97 AL135923.2-201ENST00000435444 501 ntTSL 2 BASIC3.14□□□□□ -1.91
SH3KBP1Q96B97 AC115115.1-201ENST00000449927 248 ntBASIC3.14□□□□□ -1.91
SH3KBP1Q96B97 AL353780.1-201ENST00000455583 458 ntTSL 2 BASIC3.14□□□□□ -1.91
SH3KBP1Q96B97 RN7SL863P-201ENST00000462370 296 ntBASIC3.14□□□□□ -1.91
SH3KBP1Q96B97 MIR1302-2HG-201ENST00000469289 535 ntTSL 5 BASIC3.14□□□□□ -1.91
SH3KBP1Q96B97 AC012055.2-201ENST00000504167 335 ntTSL 3 BASIC3.14□□□□□ -1.91
SH3KBP1Q96B97 AC008871.1-201ENST00000510935 398 ntTSL 3 BASIC3.14□□□□□ -1.91
SH3KBP1Q96B97 AC008716.1-201ENST00000511084 513 ntBASIC3.14□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 171.9 ms