Protein–RNA interactions for Protein: Q96AA3

RFT1, Protein RFT1 homolog, humanhuman

Predictions only

Length 541 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFT1Q96AA3 DCAF17-212ENST00000611110 975 ntTSL 1 (best) BASIC2.52□□□□□ -2.01
RFT1Q96AA3 GPR171-203ENST00000617554 960 ntAPPRIS P1 BASIC2.52□□□□□ -2.01
RFT1Q96AA3 MANEA-201ENST00000358812 4575 ntAPPRIS P1 TSL 1 (best) BASIC2.52□□□□□ -2.01
RFT1Q96AA3 TSGA10-205ENST00000410001 3036 ntAPPRIS P2 TSL 1 (best) BASIC2.52□□□□□ -2.01
RFT1Q96AA3 CCDC82-201ENST00000278520 2941 ntAPPRIS P2 TSL 5 BASIC2.51□□□□□ -2.01
RFT1Q96AA3 MIR412-201ENST00000362142 91 ntBASIC2.51□□□□□ -2.01
RFT1Q96AA3 RNU6-461P-201ENST00000364195 107 ntBASIC2.51□□□□□ -2.01
RFT1Q96AA3 SNORD115-7-201ENST00000365306 82 ntBASIC2.51□□□□□ -2.01
RFT1Q96AA3 MDM4-202ENST00000367180 547 ntTSL 3 BASIC2.51□□□□□ -2.01
RFT1Q96AA3 RNU6-1083P-201ENST00000384022 107 ntBASIC2.51□□□□□ -2.01
RFT1Q96AA3 Y_RNA.576-201ENST00000384781 102 ntBASIC2.51□□□□□ -2.01
RFT1Q96AA3 CIR1P3-201ENST00000405137 479 ntBASIC2.51□□□□□ -2.01
RFT1Q96AA3 AL590002.1-201ENST00000406554 418 ntBASIC2.51□□□□□ -2.01
RFT1Q96AA3 MIR1277-201ENST00000408536 78 ntBASIC2.51□□□□□ -2.01
RFT1Q96AA3 AC026355.1-201ENST00000423466 587 ntTSL 5 BASIC2.51□□□□□ -2.01
RFT1Q96AA3 AL355674.1-201ENST00000423681 648 ntTSL 1 (best) BASIC2.51□□□□□ -2.01
RFT1Q96AA3 PTGES3P4-201ENST00000426243 356 ntBASIC2.51□□□□□ -2.01
RFT1Q96AA3 AC241644.2-201ENST00000426504 480 ntTSL 3 BASIC2.51□□□□□ -2.01
RFT1Q96AA3 AC007560.1-201ENST00000426912 237 ntBASIC2.51□□□□□ -2.01
RFT1Q96AA3 AC000111.3-201ENST00000433478 193 ntBASIC2.51□□□□□ -2.01
RFT1Q96AA3 AL121601.2-201ENST00000438019 707 ntBASIC2.51□□□□□ -2.01
RFT1Q96AA3 MRPL50P4-201ENST00000446432 475 ntBASIC2.51□□□□□ -2.01
RFT1Q96AA3 VN1R34P-201ENST00000447387 883 ntBASIC2.51□□□□□ -2.01
RFT1Q96AA3 AC132479.1-201ENST00000449160 144 ntBASIC2.51□□□□□ -2.01
RFT1Q96AA3 NDUFB1P2-201ENST00000449477 176 ntBASIC2.51□□□□□ -2.01
RFT1Q96AA3 AC069549.1-201ENST00000451584 499 ntTSL 3 BASIC2.51□□□□□ -2.01
RFT1Q96AA3 AL441989.1-201ENST00000454204 382 ntTSL 3 BASIC2.51□□□□□ -2.01
RFT1Q96AA3 AC022364.2-201ENST00000457963 554 ntBASIC2.51□□□□□ -2.01
RFT1Q96AA3 AC023194.1-201ENST00000493084 308 ntBASIC2.51□□□□□ -2.01
RFT1Q96AA3 AC022272.1-201ENST00000503478 777 ntTSL 2 BASIC2.51□□□□□ -2.01
RFT1Q96AA3 AC117522.3-201ENST00000507974 584 ntBASIC2.51□□□□□ -2.01
RFT1Q96AA3 AC008716.1-201ENST00000511084 513 ntBASIC2.51□□□□□ -2.01
RFT1Q96AA3 AC074250.1-201ENST00000511117 192 ntBASIC2.51□□□□□ -2.01
RFT1Q96AA3 AC008700.1-202ENST00000513657 468 ntTSL 5 BASIC2.51□□□□□ -2.01
RFT1Q96AA3 AC112206.3-201ENST00000514578 389 ntBASIC2.51□□□□□ -2.01
RFT1Q96AA3 RNA5SP367-201ENST00000516557 118 ntBASIC2.51□□□□□ -2.01
RFT1Q96AA3 HDAC2-AS2-206ENST00000517965 850 ntTSL 3 BASIC2.51□□□□□ -2.01
RFT1Q96AA3 AC025524.1-201ENST00000518489 606 ntTSL 4 BASIC2.51□□□□□ -2.01
RFT1Q96AA3 ZNF436-AS1-205ENST00000518600 376 ntTSL 5 BASIC2.51□□□□□ -2.01
RFT1Q96AA3 AC022039.1-201ENST00000527110 488 ntTSL 2 BASIC2.51□□□□□ -2.01
RFT1Q96AA3 AL121821.2-201ENST00000556081 394 ntBASIC2.51□□□□□ -2.01
RFT1Q96AA3 SNORA59B-202ENST00000578183 701 ntBASIC2.51□□□□□ -2.01
RFT1Q96AA3 MIR4446-201ENST00000578505 67 ntBASIC2.51□□□□□ -2.01
RFT1Q96AA3 AC008739.3-201ENST00000603262 127 ntBASIC2.51□□□□□ -2.01
RFT1Q96AA3 MIR4458HG-202ENST00000605918 1057 ntTSL 1 (best) BASIC2.51□□□□□ -2.01
RFT1Q96AA3 AL359962.2-201ENST00000610044 303 ntTSL 5 BASIC2.51□□□□□ -2.01
RFT1Q96AA3 AC009161.2-201ENST00000624626 138 ntBASIC2.51□□□□□ -2.01
RFT1Q96AA3 AC010329.5-201ENST00000623497 2174 ntBASIC2.51□□□□□ -2.01
RFT1Q96AA3 SHOC2-201ENST00000265277 3691 ntTSL 2 BASIC2.51□□□□□ -2.01
RFT1Q96AA3 LTN1-201ENST00000361371 7685 ntAPPRIS P1 TSL 1 (best) BASIC2.51□□□□□ -2.01
RFT1Q96AA3 CBLL1-201ENST00000222597 2003 ntAPPRIS ALT1 TSL 1 (best) BASIC2.51□□□□□ -2.01
RFT1Q96AA3 EMCN-202ENST00000305864 1575 ntTSL 1 (best) BASIC2.5□□□□□ -2.01
RFT1Q96AA3 CASP1-201ENST00000353247 423 ntTSL 1 (best) BASIC2.5□□□□□ -2.01
RFT1Q96AA3 SNORA71.3-201ENST00000362582 128 ntBASIC2.5□□□□□ -2.01
RFT1Q96AA3 SNORA71.1-201ENST00000364523 117 ntBASIC2.5□□□□□ -2.01
RFT1Q96AA3 RNU6-1103P-201ENST00000384150 107 ntBASIC2.5□□□□□ -2.01
RFT1Q96AA3 MIR7-3-201ENST00000384898 110 ntBASIC2.5□□□□□ -2.01
RFT1Q96AA3 MIR1-2-201ENST00000384961 85 ntBASIC2.5□□□□□ -2.01
RFT1Q96AA3 LINC00844-201ENST00000432535 477 ntTSL 2 BASIC2.5□□□□□ -2.01
RFT1Q96AA3 TEX41-209ENST00000451478 452 ntTSL 2 BASIC2.5□□□□□ -2.01
RFT1Q96AA3 AC092001.1-201ENST00000453012 261 ntBASIC2.5□□□□□ -2.01
RFT1Q96AA3 AC073901.1-201ENST00000462471 408 ntBASIC2.5□□□□□ -2.01
RFT1Q96AA3 PLCH1-AS2-201ENST00000472913 408 ntTSL 2 BASIC2.5□□□□□ -2.01
RFT1Q96AA3 HMGB1P29-201ENST00000505659 499 ntBASIC2.5□□□□□ -2.01
RFT1Q96AA3 TBCAP3-201ENST00000512475 312 ntBASIC2.5□□□□□ -2.01
RFT1Q96AA3 LINC02061-201ENST00000514225 335 ntTSL 3 BASIC2.5□□□□□ -2.01
RFT1Q96AA3 SNORA31.6-201ENST00000516241 130 ntBASIC2.5□□□□□ -2.01
RFT1Q96AA3 RNU6-1178P-201ENST00000516674 107 ntBASIC2.5□□□□□ -2.01
RFT1Q96AA3 AC099554.1-201ENST00000520032 572 ntTSL 3 BASIC2.5□□□□□ -2.01
RFT1Q96AA3 AC113145.1-201ENST00000522408 412 ntTSL 5 BASIC2.5□□□□□ -2.01
RFT1Q96AA3 AC025871.1-201ENST00000523935 443 ntTSL 2 BASIC2.5□□□□□ -2.01
RFT1Q96AA3 AP001893.2-201ENST00000526949 202 ntBASIC2.5□□□□□ -2.01
RFT1Q96AA3 OR5AQ1P-201ENST00000527596 927 ntBASIC2.5□□□□□ -2.01
RFT1Q96AA3 OR5BN1P-201ENST00000532955 829 ntBASIC2.5□□□□□ -2.01
RFT1Q96AA3 AC090616.3-201ENST00000582184 217 ntBASIC2.5□□□□□ -2.01
RFT1Q96AA3 AC024610.1-201ENST00000582685 323 ntTSL 3 BASIC2.5□□□□□ -2.01
RFT1Q96AA3 BX546450.2-201ENST00000602419 435 ntTSL 5 BASIC2.5□□□□□ -2.01
RFT1Q96AA3 AL356575.1-201ENST00000603008 283 ntBASIC2.5□□□□□ -2.01
RFT1Q96AA3 AP001596.2-201ENST00000608410 312 ntBASIC2.5□□□□□ -2.01
RFT1Q96AA3 AL162274.2-201ENST00000614406 332 ntBASIC2.5□□□□□ -2.01
RFT1Q96AA3 SRP54-214ENST00000630962 162 ntTSL 5 BASIC2.5□□□□□ -2.01
RFT1Q96AA3 MIR7515-201ENST00000637837 67 ntBASIC2.5□□□□□ -2.01
RFT1Q96AA3 GABRG2-221ENST00000639683 3600 ntTSL 5 BASIC2.5□□□□□ -2.01
RFT1Q96AA3 PARPBP-203ENST00000392911 1916 ntTSL 5 BASIC2.5□□□□□ -2.01
RFT1Q96AA3 MYOT-201ENST00000239926 2337 ntAPPRIS P1 TSL 1 (best) BASIC2.5□□□□□ -2.01
RFT1Q96AA3 CKAP2P1-201ENST00000555477 2049 ntBASIC2.49□□□□□ -2.01
RFT1Q96AA3 TAB3-203ENST00000378930 6255 ntAPPRIS P1 TSL 1 (best) BASIC2.49□□□□□ -2.01
RFT1Q96AA3 GCNT4-201ENST00000322348 5554 ntAPPRIS P1 BASIC2.49□□□□□ -2.01
RFT1Q96AA3 CLUL1-208ENST00000581619 2449 ntTSL 2 BASIC2.49□□□□□ -2.01
RFT1Q96AA3 HSPA8P4-201ENST00000511877 1920 ntBASIC2.49□□□□□ -2.01
RFT1Q96AA3 PRKACB-204ENST00000370685 4481 ntAPPRIS P4 TSL 1 (best) BASIC2.49□□□□□ -2.01
RFT1Q96AA3 EDDM3A-201ENST00000326842 927 ntAPPRIS P1 TSL 1 (best) BASIC2.49□□□□□ -2.01
RFT1Q96AA3 Y_RNA.1-201ENST00000352915 104 ntBASIC2.49□□□□□ -2.01
RFT1Q96AA3 SNORA63.1-201ENST00000362493 131 ntBASIC2.49□□□□□ -2.01
RFT1Q96AA3 RNU6-898P-201ENST00000365627 104 ntBASIC2.49□□□□□ -2.01
RFT1Q96AA3 TRAV40-201ENST00000390467 317 ntAPPRIS P1 BASIC2.49□□□□□ -2.01
RFT1Q96AA3 BCL2L11-207ENST00000405953 425 ntTSL 1 (best) BASIC2.49□□□□□ -2.01
RFT1Q96AA3 RPS4XP7-201ENST00000406274 780 ntBASIC2.49□□□□□ -2.01
RFT1Q96AA3 Y_RNA.623-201ENST00000411128 95 ntBASIC2.49□□□□□ -2.01
RFT1Q96AA3 AC104462.1-201ENST00000414565 447 ntTSL 2 BASIC2.49□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 82.6 ms