Protein–RNA interactions for Protein: Q92547

TOPBP1, DNA topoisomerase 2-binding protein 1, humanhuman

Predictions only

Length 1,522 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1Q92547 LINC02095-201ENST00000430908 346 ntTSL 2 BASIC1.38□□□□□ -2.19
TOPBP1Q92547 RPL23AP3-201ENST00000453844 468 ntBASIC1.38□□□□□ -2.19
TOPBP1Q92547 TSPY5P-202ENST00000456541 142 ntTSL 3 BASIC1.38□□□□□ -2.19
TOPBP1Q92547 HMGB1P36-201ENST00000487709 576 ntBASIC1.38□□□□□ -2.19
TOPBP1Q92547 AF117829.1-204ENST00000519854 284 ntTSL 3 BASIC1.38□□□□□ -2.19
TOPBP1Q92547 LINC00557-201ENST00000563184 1279 ntBASIC1.38□□□□□ -2.19
TOPBP1Q92547 MIR4711-201ENST00000578274 70 ntBASIC1.38□□□□□ -2.19
TOPBP1Q92547 AC026741.1-201ENST00000605892 482 ntBASIC1.38□□□□□ -2.19
TOPBP1Q92547 AC103810.9-201ENST00000606688 112 ntBASIC1.38□□□□□ -2.19
TOPBP1Q92547 uc_338.14-201ENST00000613162 166 ntBASIC1.38□□□□□ -2.19
TOPBP1Q92547 MTND4P12-201ENST00000498999 1377 ntBASIC1.37□□□□□ -2.19
TOPBP1Q92547 RNU6-637P-201ENST00000384050 107 ntBASIC1.37□□□□□ -2.19
TOPBP1Q92547 BX664727.1-201ENST00000416024 466 ntBASIC1.37□□□□□ -2.19
TOPBP1Q92547 AC244636.1-201ENST00000421152 228 ntBASIC1.37□□□□□ -2.19
TOPBP1Q92547 AL358176.2-201ENST00000425769 204 ntBASIC1.37□□□□□ -2.19
TOPBP1Q92547 LINC01953-201ENST00000426870 717 ntTSL 5 BASIC1.37□□□□□ -2.19
TOPBP1Q92547 SEPT7P5-201ENST00000434048 306 ntBASIC1.37□□□□□ -2.19
TOPBP1Q92547 SNRPEP9-201ENST00000436794 238 ntBASIC1.37□□□□□ -2.19
TOPBP1Q92547 AC121161.1-201ENST00000510606 652 ntBASIC1.37□□□□□ -2.19
TOPBP1Q92547 AC093677.1-201ENST00000514414 678 ntBASIC1.37□□□□□ -2.19
TOPBP1Q92547 AP003072.2-201ENST00000527756 676 ntBASIC1.37□□□□□ -2.19
TOPBP1Q92547 AL359212.1-201ENST00000556608 614 ntBASIC1.37□□□□□ -2.19
TOPBP1Q92547 AC090519.2-201ENST00000559034 655 ntTSL 5 BASIC1.37□□□□□ -2.19
TOPBP1Q92547 AP005230.1-201ENST00000585072 675 ntTSL 5 BASIC1.37□□□□□ -2.19
TOPBP1Q92547 AC002545.1-201ENST00000592511 181 ntBASIC1.37□□□□□ -2.19
TOPBP1Q92547 AC004805.2-201ENST00000605382 482 ntBASIC1.37□□□□□ -2.19
TOPBP1Q92547 AC106052.1-201ENST00000608029 497 ntBASIC1.37□□□□□ -2.19
TOPBP1Q92547 AC010133.1-201ENST00000615809 842 ntBASIC1.37□□□□□ -2.19
TOPBP1Q92547 C4orf22-209ENST00000621014 228 ntTSL 3 BASIC1.37□□□□□ -2.19
TOPBP1Q92547 MIR1322-201ENST00000638013 71 ntBASIC1.37□□□□□ -2.19
TOPBP1Q92547 AL138713.1-201ENST00000624026 2130 ntBASIC1.37□□□□□ -2.19
TOPBP1Q92547 PARPBP-203ENST00000392911 1916 ntTSL 5 BASIC1.37□□□□□ -2.19
TOPBP1Q92547 OR4P4-201ENST00000314612 939 ntAPPRIS P1 BASIC1.36□□□□□ -2.19
TOPBP1Q92547 RNU6-754P-201ENST00000391166 107 ntBASIC1.36□□□□□ -2.19
TOPBP1Q92547 CCNG1P1-201ENST00000406783 885 ntBASIC1.36□□□□□ -2.19
TOPBP1Q92547 USP9YP33-201ENST00000412220 421 ntBASIC1.36□□□□□ -2.19
TOPBP1Q92547 RPS24P7-201ENST00000416921 246 ntBASIC1.36□□□□□ -2.19
TOPBP1Q92547 MTCYBP38-201ENST00000417160 1123 ntBASIC1.36□□□□□ -2.19
TOPBP1Q92547 XKRYP1-201ENST00000423438 492 ntBASIC1.36□□□□□ -2.19
TOPBP1Q92547 TXNDC8-204ENST00000423740 356 ntTSL 1 (best) BASIC1.36□□□□□ -2.19
TOPBP1Q92547 RPL31P35-201ENST00000431058 377 ntBASIC1.36□□□□□ -2.19
TOPBP1Q92547 XKRYP2-201ENST00000432915 492 ntBASIC1.36□□□□□ -2.19
TOPBP1Q92547 USP9YP35-201ENST00000435696 412 ntBASIC1.36□□□□□ -2.19
TOPBP1Q92547 MTCO3P43-201ENST00000440974 771 ntBASIC1.36□□□□□ -2.19
TOPBP1Q92547 AC008379.1-201ENST00000463655 464 ntBASIC1.36□□□□□ -2.19
TOPBP1Q92547 AC107032.1-201ENST00000485945 480 ntBASIC1.36□□□□□ -2.19
TOPBP1Q92547 AC108037.1-201ENST00000514103 423 ntTSL 3 BASIC1.36□□□□□ -2.19
TOPBP1Q92547 TSPAN19-204ENST00000532498 998 ntAPPRIS P1 TSL 5 BASIC1.36□□□□□ -2.19
TOPBP1Q92547 AP000462.2-203ENST00000540545 715 ntTSL 5 BASIC1.36□□□□□ -2.19
TOPBP1Q92547 AC021739.1-201ENST00000559631 174 ntBASIC1.36□□□□□ -2.19
TOPBP1Q92547 MTATP6P25-201ENST00000574491 261 ntBASIC1.36□□□□□ -2.19
TOPBP1Q92547 AC011477.3-201ENST00000585571 403 ntTSL 5 BASIC1.36□□□□□ -2.19
TOPBP1Q92547 AP001269.3-201ENST00000588718 329 ntBASIC1.36□□□□□ -2.19
TOPBP1Q92547 AL157770.1-201ENST00000623049 439 ntBASIC1.36□□□□□ -2.19
TOPBP1Q92547 AC019226.1-201ENST00000625666 515 ntBASIC1.36□□□□□ -2.19
TOPBP1Q92547 RNA5SP276-201ENST00000362580 94 ntBASIC1.35□□□□□ -2.19
TOPBP1Q92547 RNU6-778P-201ENST00000363269 103 ntBASIC1.35□□□□□ -2.19
TOPBP1Q92547 SNORA23-201ENST00000365128 182 ntBASIC1.35□□□□□ -2.19
TOPBP1Q92547 RABGGTB-202ENST00000370826 512 ntTSL 2 BASIC1.35□□□□□ -2.19
TOPBP1Q92547 RNU1-39P-201ENST00000383897 165 ntBASIC1.35□□□□□ -2.19
TOPBP1Q92547 Y_RNA.471-201ENST00000384312 102 ntBASIC1.35□□□□□ -2.19
TOPBP1Q92547 DHFRP6-201ENST00000401776 268 ntBASIC1.35□□□□□ -2.19
TOPBP1Q92547 RNA5SP127-201ENST00000411051 133 ntBASIC1.35□□□□□ -2.19
TOPBP1Q92547 GPC5-IT1-201ENST00000416664 658 ntTSL 3 BASIC1.35□□□□□ -2.19
TOPBP1Q92547 AC096920.1-201ENST00000423991 241 ntBASIC1.35□□□□□ -2.19
TOPBP1Q92547 MTCO3P46-201ENST00000425787 232 ntBASIC1.35□□□□□ -2.19
TOPBP1Q92547 AC064852.1-201ENST00000427571 851 ntTSL 3 BASIC1.35□□□□□ -2.19
TOPBP1Q92547 AL050303.1-201ENST00000444356 458 ntTSL 2 BASIC1.35□□□□□ -2.19
TOPBP1Q92547 MTND2P3-201ENST00000452458 470 ntBASIC1.35□□□□□ -2.19
TOPBP1Q92547 MCCC1-AS1-201ENST00000471731 765 ntTSL 5 BASIC1.35□□□□□ -2.19
TOPBP1Q92547 SNORD19.2-201ENST00000516978 73 ntBASIC1.35□□□□□ -2.19
TOPBP1Q92547 RNA5SP290-201ENST00000517133 127 ntBASIC1.35□□□□□ -2.19
TOPBP1Q92547 AC122134.1-202ENST00000569111 1201 ntBASIC1.35□□□□□ -2.19
TOPBP1Q92547 AL139344.1-201ENST00000605228 195 ntBASIC1.35□□□□□ -2.19
TOPBP1Q92547 U4atac.1-201ENST00000618345 95 ntBASIC1.35□□□□□ -2.19
TOPBP1Q92547 FP475955.2-201ENST00000623720 458 ntTSL 2 BASIC1.35□□□□□ -2.19
TOPBP1Q92547 U2.21-201ENST00000637295 81 ntBASIC1.35□□□□□ -2.19
TOPBP1Q92547 AL359854.1-201ENST00000614203 1594 ntBASIC1.35□□□□□ -2.19
TOPBP1Q92547 RNU6ATAC27P-201ENST00000408289 119 ntBASIC1.35□□□□□ -2.19
TOPBP1Q92547 AC027644.1-201ENST00000419595 298 ntBASIC1.35□□□□□ -2.19
TOPBP1Q92547 AL451054.2-201ENST00000420896 202 ntBASIC1.35□□□□□ -2.19
TOPBP1Q92547 USP9YP22-201ENST00000438971 294 ntBASIC1.35□□□□□ -2.19
TOPBP1Q92547 AC092422.1-201ENST00000455576 584 ntTSL 4 BASIC1.35□□□□□ -2.19
TOPBP1Q92547 MTND2P30-201ENST00000456663 382 ntBASIC1.35□□□□□ -2.19
TOPBP1Q92547 snoU13.8-201ENST00000458890 104 ntBASIC1.35□□□□□ -2.19
TOPBP1Q92547 UBA6-AS1-204ENST00000502758 547 ntTSL 4 BASIC1.35□□□□□ -2.19
TOPBP1Q92547 LINC02484-201ENST00000513843 546 ntTSL 5 BASIC1.35□□□□□ -2.19
TOPBP1Q92547 LRRC34P2-201ENST00000514850 553 ntBASIC1.35□□□□□ -2.19
TOPBP1Q92547 AC079917.1-201ENST00000527828 584 ntTSL 3 BASIC1.35□□□□□ -2.19
TOPBP1Q92547 MRPL42-203ENST00000547098 701 ntTSL 3 BASIC1.35□□□□□ -2.19
TOPBP1Q92547 PPFIA2-AS1-205ENST00000550938 790 ntTSL 3 BASIC1.35□□□□□ -2.19
TOPBP1Q92547 AL138963.2-201ENST00000605137 226 ntBASIC1.35□□□□□ -2.19
TOPBP1Q92547 AC007038.2-201ENST00000608095 740 ntBASIC1.35□□□□□ -2.19
TOPBP1Q92547 AC107075.1-201ENST00000613695 314 ntBASIC1.35□□□□□ -2.19
TOPBP1Q92547 AC104763.3-201ENST00000613765 618 ntBASIC1.35□□□□□ -2.19
TOPBP1Q92547 MIR5739-201ENST00000619803 80 ntBASIC1.35□□□□□ -2.19
TOPBP1Q92547 AC097460.3-201ENST00000623099 442 ntBASIC1.35□□□□□ -2.19
TOPBP1Q92547 AC109454.4-201ENST00000623411 649 ntBASIC1.35□□□□□ -2.19
TOPBP1Q92547 AC079416.3-201ENST00000624479 549 ntBASIC1.35□□□□□ -2.19
TOPBP1Q92547 C18orf54-201ENST00000300091 5237 ntAPPRIS P1 TSL 1 (best) BASIC1.34□□□□□ -2.19
Retrieved 100 of 98,524 protein–RNA pairs in 98.7 ms