Protein–RNA interactions for Protein: Q8WYN0

ATG4A, Cysteine protease ATG4A, humanhuman

Predictions only

Length 398 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4AQ8WYN0 ELOCP5-201ENST00000604924 333 ntBASIC3.41□□□□□ -1.86
ATG4AQ8WYN0 AC007938.3-201ENST00000604965 623 ntBASIC3.41□□□□□ -1.86
ATG4AQ8WYN0 AC004805.2-201ENST00000605382 482 ntBASIC3.41□□□□□ -1.86
ATG4AQ8WYN0 AL080274.1-201ENST00000605565 220 ntBASIC3.41□□□□□ -1.86
ATG4AQ8WYN0 uc_338.1-201ENST00000612113 180 ntBASIC3.41□□□□□ -1.86
ATG4AQ8WYN0 AL034408.1-202ENST00000636088 415 ntBASIC3.41□□□□□ -1.86
ATG4AQ8WYN0 CACNB4-260ENST00000637762 3800 ntTSL 5 BASIC3.41□□□□□ -1.86
ATG4AQ8WYN0 DOCK7-204ENST00000454575 6985 ntAPPRIS ALT2 TSL 1 (best) BASIC3.41□□□□□ -1.86
ATG4AQ8WYN0 KPNA2P1-201ENST00000458289 1591 ntBASIC3.41□□□□□ -1.86
ATG4AQ8WYN0 GABRG2-208ENST00000638552 3710 ntTSL 5 BASIC3.41□□□□□ -1.86
ATG4AQ8WYN0 THOC1-219ENST00000616322 2078 ntAPPRIS ALT1 TSL 5 BASIC3.4□□□□□ -1.86
ATG4AQ8WYN0 HSP90AA4P-202ENST00000506915 2228 ntBASIC3.4□□□□□ -1.86
ATG4AQ8WYN0 SNX10-209ENST00000619420 2361 ntAPPRIS ALT1 TSL 5 BASIC3.4□□□□□ -1.86
ATG4AQ8WYN0 MBNL1-206ENST00000357472 5256 ntTSL 5 BASIC3.4□□□□□ -1.87
ATG4AQ8WYN0 MBNL1-223ENST00000498502 5258 ntTSL 5 BASIC3.4□□□□□ -1.87
ATG4AQ8WYN0 SNORD62.1-201ENST00000362541 86 ntBASIC3.4□□□□□ -1.87
ATG4AQ8WYN0 Y_RNA.146-201ENST00000363549 102 ntBASIC3.4□□□□□ -1.87
ATG4AQ8WYN0 SNORD14B-201ENST00000364533 90 ntBASIC3.4□□□□□ -1.87
ATG4AQ8WYN0 SNORA73.2-201ENST00000364946 201 ntBASIC3.4□□□□□ -1.87
ATG4AQ8WYN0 MIR325-201ENST00000385260 98 ntBASIC3.4□□□□□ -1.87
ATG4AQ8WYN0 SNORA40C-201ENST00000391285 128 ntBASIC3.4□□□□□ -1.87
ATG4AQ8WYN0 RN7SKP111-201ENST00000410349 271 ntBASIC3.4□□□□□ -1.87
ATG4AQ8WYN0 RNA5SP293-201ENST00000410527 113 ntBASIC3.4□□□□□ -1.87
ATG4AQ8WYN0 Y_RNA.623-201ENST00000411128 95 ntBASIC3.4□□□□□ -1.87
ATG4AQ8WYN0 RNU6-293P-201ENST00000411259 106 ntBASIC3.4□□□□□ -1.87
ATG4AQ8WYN0 TRAPPC2P4-201ENST00000421750 331 ntBASIC3.4□□□□□ -1.87
ATG4AQ8WYN0 ARF4P2-201ENST00000430209 526 ntBASIC3.4□□□□□ -1.87
ATG4AQ8WYN0 AL157937.1-201ENST00000435092 443 ntTSL 3 BASIC3.4□□□□□ -1.87
ATG4AQ8WYN0 RPL23AP22-201ENST00000437556 453 ntBASIC3.4□□□□□ -1.87
ATG4AQ8WYN0 AC095032.1-201ENST00000444810 527 ntTSL 3 BASIC3.4□□□□□ -1.87
ATG4AQ8WYN0 RPL21P23-201ENST00000446654 460 ntBASIC3.4□□□□□ -1.87
ATG4AQ8WYN0 AL353148.1-201ENST00000449761 463 ntTSL 2 BASIC3.4□□□□□ -1.87
ATG4AQ8WYN0 RN7SL542P-201ENST00000467147 294 ntBASIC3.4□□□□□ -1.87
ATG4AQ8WYN0 AC139453.3-201ENST00000493276 369 ntBASIC3.4□□□□□ -1.87
ATG4AQ8WYN0 AC104304.1-201ENST00000505797 291 ntAPPRIS P1 TSL 3 BASIC3.4□□□□□ -1.87
ATG4AQ8WYN0 SLC25A15P5-201ENST00000508033 253 ntBASIC3.4□□□□□ -1.87
ATG4AQ8WYN0 MTCYBP40-201ENST00000509390 1135 ntBASIC3.4□□□□□ -1.87
ATG4AQ8WYN0 AC093303.1-201ENST00000514549 295 ntBASIC3.4□□□□□ -1.87
ATG4AQ8WYN0 AC090568.2-205ENST00000518631 576 ntTSL 4 BASIC3.4□□□□□ -1.87
ATG4AQ8WYN0 LINC02155-201ENST00000519215 407 ntTSL 5 BASIC3.4□□□□□ -1.87
ATG4AQ8WYN0 AP000755.2-201ENST00000526777 571 ntTSL 5 BASIC3.4□□□□□ -1.87
ATG4AQ8WYN0 AC127894.1-201ENST00000548266 851 ntTSL 3 BASIC3.4□□□□□ -1.87
ATG4AQ8WYN0 AC019183.1-201ENST00000580524 505 ntTSL 3 BASIC3.4□□□□□ -1.87
ATG4AQ8WYN0 CYP2C61P-201ENST00000604072 290 ntBASIC3.4□□□□□ -1.87
ATG4AQ8WYN0 AL162713.1-201ENST00000604480 262 ntBASIC3.4□□□□□ -1.87
ATG4AQ8WYN0 AC133104.2-201ENST00000615272 193 ntBASIC3.4□□□□□ -1.87
ATG4AQ8WYN0 AF117829.1-206ENST00000621883 3802 ntBASIC3.4□□□□□ -1.87
ATG4AQ8WYN0 AC039056.2-201ENST00000622261 511 ntBASIC3.4□□□□□ -1.87
ATG4AQ8WYN0 AC099506.2-201ENST00000623074 221 ntBASIC3.4□□□□□ -1.87
ATG4AQ8WYN0 AC073476.4-201ENST00000628409 72 ntBASIC3.4□□□□□ -1.87
ATG4AQ8WYN0 AL669831.3-213ENST00000636676 183 ntBASIC3.4□□□□□ -1.87
ATG4AQ8WYN0 C6orf10-204ENST00000447241 2148 ntAPPRIS P3 TSL 5 BASIC3.4□□□□□ -1.87
ATG4AQ8WYN0 ECT2-211ENST00000441497 2825 ntAPPRIS P2 TSL 1 (best) BASIC3.39□□□□□ -1.87
ATG4AQ8WYN0 MTND4P27-201ENST00000450813 1354 ntBASIC3.39□□□□□ -1.87
ATG4AQ8WYN0 AC090740.1-201ENST00000623193 2262 ntBASIC3.39□□□□□ -1.87
ATG4AQ8WYN0 MUC15-201ENST00000281268 2968 ntTSL 5 BASIC3.39□□□□□ -1.87
ATG4AQ8WYN0 SNORD6-201ENST00000365444 73 ntBASIC3.39□□□□□ -1.87
ATG4AQ8WYN0 RNU6-805P-201ENST00000365643 106 ntBASIC3.39□□□□□ -1.87
ATG4AQ8WYN0 SNORD73A-201ENST00000386062 65 ntBASIC3.39□□□□□ -1.87
ATG4AQ8WYN0 RNU6ATAC-201ENST00000408749 126 ntBASIC3.39□□□□□ -1.87
ATG4AQ8WYN0 YPEL5P1-201ENST00000419731 367 ntBASIC3.39□□□□□ -1.87
ATG4AQ8WYN0 ZFY-AS1-202ENST00000431145 419 ntTSL 3 BASIC3.39□□□□□ -1.87
ATG4AQ8WYN0 AL627311.1-201ENST00000431514 115 ntBASIC3.39□□□□□ -1.87
ATG4AQ8WYN0 AL512844.2-201ENST00000433990 593 ntBASIC3.39□□□□□ -1.87
ATG4AQ8WYN0 AL138916.1-201ENST00000436295 455 ntTSL 3 BASIC3.39□□□□□ -1.87
ATG4AQ8WYN0 SNRPEP9-201ENST00000436794 238 ntBASIC3.39□□□□□ -1.87
ATG4AQ8WYN0 HIGD1AP11-201ENST00000438361 280 ntBASIC3.39□□□□□ -1.87
ATG4AQ8WYN0 LINC02264-201ENST00000442020 576 ntTSL 3 BASIC3.39□□□□□ -1.87
ATG4AQ8WYN0 AL583843.1-201ENST00000456070 346 ntBASIC3.39□□□□□ -1.87
ATG4AQ8WYN0 RPL30P15-201ENST00000457129 321 ntBASIC3.39□□□□□ -1.87
ATG4AQ8WYN0 AC012081.1-201ENST00000462382 477 ntTSL 3 BASIC3.39□□□□□ -1.87
ATG4AQ8WYN0 RPL23AP62-201ENST00000463396 453 ntBASIC3.39□□□□□ -1.87
ATG4AQ8WYN0 AL135752.1-201ENST00000479477 471 ntBASIC3.39□□□□□ -1.87
ATG4AQ8WYN0 RNU6-1282P-201ENST00000516735 96 ntBASIC3.39□□□□□ -1.87
ATG4AQ8WYN0 SNORA31.19-201ENST00000517079 126 ntBASIC3.39□□□□□ -1.87
ATG4AQ8WYN0 TMCO5B-203ENST00000529623 509 ntTSL 4 BASIC3.39□□□□□ -1.87
ATG4AQ8WYN0 AC009320.1-201ENST00000549070 349 ntTSL 3 BASIC3.39□□□□□ -1.87
ATG4AQ8WYN0 AC025254.1-201ENST00000550035 247 ntTSL 5 BASIC3.39□□□□□ -1.87
ATG4AQ8WYN0 ZFP30-209ENST00000589018 444 ntTSL 5 BASIC3.39□□□□□ -1.87
ATG4AQ8WYN0 LINC02112-205ENST00000606744 236 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
ATG4AQ8WYN0 MIR92B-201ENST00000607575 96 ntBASIC3.39□□□□□ -1.87
ATG4AQ8WYN0 AL161423.1-201ENST00000613700 262 ntBASIC3.39□□□□□ -1.87
ATG4AQ8WYN0 AL157817.1-201ENST00000614264 790 ntBASIC3.39□□□□□ -1.87
ATG4AQ8WYN0 AL110115.1-201ENST00000614396 364 ntBASIC3.39□□□□□ -1.87
ATG4AQ8WYN0 DAOA-AS1_2.1-201ENST00000614829 187 ntBASIC3.39□□□□□ -1.87
ATG4AQ8WYN0 SMAD5-AS1_2.1-201ENST00000617906 131 ntBASIC3.39□□□□□ -1.87
ATG4AQ8WYN0 HIKESHI-208ENST00000618164 499 ntTSL 5 BASIC3.39□□□□□ -1.87
ATG4AQ8WYN0 AC092628.2-201ENST00000622492 339 ntBASIC3.39□□□□□ -1.87
ATG4AQ8WYN0 AC244517.12-201ENST00000623581 663 ntBASIC3.39□□□□□ -1.87
ATG4AQ8WYN0 AC007218.2-201ENST00000636913 179 ntTSL 5 BASIC3.39□□□□□ -1.87
ATG4AQ8WYN0 EPS15-202ENST00000371730 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC3.39□□□□□ -1.87
ATG4AQ8WYN0 AL672296.1-201ENST00000427780 2158 ntBASIC3.39□□□□□ -1.87
ATG4AQ8WYN0 AC118273.1-201ENST00000525324 3006 ntBASIC3.38□□□□□ -1.87
ATG4AQ8WYN0 SYNE2-212ENST00000554584 20508 ntTSL 5 BASIC3.38□□□□□ -1.87
ATG4AQ8WYN0 NETO1-202ENST00000397929 1849 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
ATG4AQ8WYN0 MTND5P10-201ENST00000603719 1809 ntBASIC3.38□□□□□ -1.87
ATG4AQ8WYN0 CCDC30-212ENST00000507855 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC3.38□□□□□ -1.87
ATG4AQ8WYN0 RNA5SP383-201ENST00000362934 120 ntBASIC3.38□□□□□ -1.87
ATG4AQ8WYN0 Y_RNA.132-201ENST00000363421 102 ntBASIC3.38□□□□□ -1.87
ATG4AQ8WYN0 Y_RNA.395-201ENST00000383945 109 ntBASIC3.38□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 79.3 ms