Protein–RNA interactions for Protein: Q8WW32

HMGB4, High mobility group protein B4, humanhuman

Predictions only

Length 186 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB4Q8WW32 UBE2E2-207ENST00000628311 267 ntTSL 5 BASIC3.24□□□□□ -1.89
HMGB4Q8WW32 FASTKD1-205ENST00000453929 2791 ntTSL 2 BASIC3.24□□□□□ -1.89
HMGB4Q8WW32 PSMA5-201ENST00000271308 3729 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
HMGB4Q8WW32 RAPGEF6-202ENST00000308008 4176 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
HMGB4Q8WW32 OR51L1-203ENST00000641819 7300 ntAPPRIS P1 BASIC3.23□□□□□ -1.89
HMGB4Q8WW32 MUC15-205ENST00000529533 2084 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
HMGB4Q8WW32 ADGRV1-201ENST00000405460 19557 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
HMGB4Q8WW32 AC017071.1-201ENST00000564407 2204 ntBASIC3.23□□□□□ -1.89
HMGB4Q8WW32 HIF1A-201ENST00000323441 3555 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
HMGB4Q8WW32 THOC2-201ENST00000245838 5609 ntAPPRIS P1 TSL 5 BASIC3.23□□□□□ -1.89
HMGB4Q8WW32 LRRC39-201ENST00000342895 1881 ntAPPRIS P1 TSL 5 BASIC3.23□□□□□ -1.89
HMGB4Q8WW32 Y_RNA.324-201ENST00000365165 102 ntBASIC3.23□□□□□ -1.89
HMGB4Q8WW32 MIR10A-201ENST00000385043 110 ntBASIC3.23□□□□□ -1.89
HMGB4Q8WW32 MIR1289-1-201ENST00000408836 144 ntBASIC3.23□□□□□ -1.89
HMGB4Q8WW32 ELF3-AS1-201ENST00000415582 500 ntTSL 2 BASIC3.23□□□□□ -1.89
HMGB4Q8WW32 LINC01853-201ENST00000417715 444 ntTSL 3 BASIC3.23□□□□□ -1.89
HMGB4Q8WW32 AC090952.1-201ENST00000424242 446 ntTSL 3 BASIC3.23□□□□□ -1.89
HMGB4Q8WW32 ARF4P2-201ENST00000430209 526 ntBASIC3.23□□□□□ -1.89
HMGB4Q8WW32 AL024508.1-201ENST00000432477 505 ntTSL 2 BASIC3.23□□□□□ -1.89
HMGB4Q8WW32 LINC01650-201ENST00000438093 602 ntTSL 2 BASIC3.23□□□□□ -1.89
HMGB4Q8WW32 CXorf51B-201ENST00000438525 436 ntAPPRIS P1 TSL 2 BASIC3.23□□□□□ -1.89
HMGB4Q8WW32 AC098831.1-201ENST00000440661 216 ntBASIC3.23□□□□□ -1.89
HMGB4Q8WW32 MTCO2P3-201ENST00000442543 421 ntBASIC3.23□□□□□ -1.89
HMGB4Q8WW32 AC117503.1-201ENST00000472241 394 ntBASIC3.23□□□□□ -1.89
HMGB4Q8WW32 AC008885.1-201ENST00000514930 301 ntBASIC3.23□□□□□ -1.89
HMGB4Q8WW32 POLK-217ENST00000515295 1438 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
HMGB4Q8WW32 SNORD59.2-201ENST00000516873 68 ntBASIC3.23□□□□□ -1.89
HMGB4Q8WW32 RNU6-1231P-201ENST00000517185 103 ntBASIC3.23□□□□□ -1.89
HMGB4Q8WW32 PKIA-203ENST00000518467 588 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
HMGB4Q8WW32 AC105999.1-201ENST00000518722 473 ntTSL 3 BASIC3.23□□□□□ -1.89
HMGB4Q8WW32 AC011611.2-201ENST00000549888 358 ntTSL 3 BASIC3.23□□□□□ -1.89
HMGB4Q8WW32 PSMA4-205ENST00000558281 773 ntTSL 3 BASIC3.23□□□□□ -1.89
HMGB4Q8WW32 AC110491.1-201ENST00000562191 2010 ntBASIC3.23□□□□□ -1.89
HMGB4Q8WW32 AC091043.1-201ENST00000579830 453 ntTSL 3 BASIC3.23□□□□□ -1.89
HMGB4Q8WW32 AC011712.1-201ENST00000588959 234 ntBASIC3.23□□□□□ -1.89
HMGB4Q8WW32 AC093732.2-201ENST00000607950 274 ntBASIC3.23□□□□□ -1.89
HMGB4Q8WW32 ATG5-207ENST00000613993 733 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
HMGB4Q8WW32 ZFYVE16-202ENST00000505560 6599 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
HMGB4Q8WW32 PHF3-202ENST00000393387 6947 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
HMGB4Q8WW32 ROCK1P1-203ENST00000608049 2457 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
HMGB4Q8WW32 SNORA5B-201ENST00000363786 132 ntBASIC3.22□□□□□ -1.89
HMGB4Q8WW32 AC106873.1-201ENST00000420664 459 ntTSL 3 BASIC3.22□□□□□ -1.89
HMGB4Q8WW32 AC097662.1-205ENST00000433324 241 ntTSL 5 BASIC3.22□□□□□ -1.89
HMGB4Q8WW32 NDUFA5P4-201ENST00000436704 385 ntBASIC3.22□□□□□ -1.89
HMGB4Q8WW32 PMCHL2-203ENST00000457791 237 ntBASIC3.22□□□□□ -1.89
HMGB4Q8WW32 AC128713.1-201ENST00000471495 306 ntBASIC3.22□□□□□ -1.89
HMGB4Q8WW32 AP002884.2-201ENST00000471647 395 ntBASIC3.22□□□□□ -1.89
HMGB4Q8WW32 CFAP44-AS1-201ENST00000473329 396 ntTSL 2 BASIC3.22□□□□□ -1.89
HMGB4Q8WW32 SNORA19.2-201ENST00000516013 114 ntBASIC3.22□□□□□ -1.89
HMGB4Q8WW32 AC009812.2-201ENST00000517657 457 ntBASIC3.22□□□□□ -1.89
HMGB4Q8WW32 AC145141.2-201ENST00000518473 501 ntTSL 3 BASIC3.22□□□□□ -1.89
HMGB4Q8WW32 BTF3P12-201ENST00000519620 469 ntBASIC3.22□□□□□ -1.89
HMGB4Q8WW32 AC107953.1-201ENST00000522216 297 ntBASIC3.22□□□□□ -1.89
HMGB4Q8WW32 LINC00933-203ENST00000559812 219 ntBASIC3.22□□□□□ -1.89
HMGB4Q8WW32 MIR2682-201ENST00000580305 110 ntBASIC3.22□□□□□ -1.89
HMGB4Q8WW32 AC021646.1-201ENST00000605469 484 ntBASIC3.22□□□□□ -1.89
HMGB4Q8WW32 RMST_8.1-201ENST00000610287 165 ntBASIC3.22□□□□□ -1.89
HMGB4Q8WW32 AL121757.2-201ENST00000611223 313 ntBASIC3.22□□□□□ -1.89
HMGB4Q8WW32 DAOA-AS1_2.1-201ENST00000614829 187 ntBASIC3.22□□□□□ -1.89
HMGB4Q8WW32 AL161629.2-201ENST00000615347 275 ntBASIC3.22□□□□□ -1.89
HMGB4Q8WW32 AC009248.2-201ENST00000619826 254 ntBASIC3.22□□□□□ -1.89
HMGB4Q8WW32 LUZP2-208ENST00000620308 4981 ntTSL 5 BASIC3.21□□□□□ -1.89
HMGB4Q8WW32 SNX10-209ENST00000619420 2361 ntAPPRIS ALT1 TSL 5 BASIC3.21□□□□□ -1.9
HMGB4Q8WW32 SNORD113-7-201ENST00000363762 77 ntBASIC3.21□□□□□ -1.9
HMGB4Q8WW32 SNORA32.2-201ENST00000384049 122 ntBASIC3.21□□□□□ -1.9
HMGB4Q8WW32 MIR518D-201ENST00000385014 87 ntBASIC3.21□□□□□ -1.9
HMGB4Q8WW32 RNA5SP31-201ENST00000411144 127 ntBASIC3.21□□□□□ -1.9
HMGB4Q8WW32 PGBD4P6-201ENST00000421501 610 ntBASIC3.21□□□□□ -1.9
HMGB4Q8WW32 MTCO3P46-201ENST00000425787 232 ntBASIC3.21□□□□□ -1.9
HMGB4Q8WW32 LINC01162-201ENST00000447262 447 ntTSL 5 BASIC3.21□□□□□ -1.9
HMGB4Q8WW32 AL392046.1-203ENST00000450106 651 ntTSL 2 BASIC3.21□□□□□ -1.9
HMGB4Q8WW32 AL034345.2-203ENST00000453417 383 ntTSL 3 BASIC3.21□□□□□ -1.9
HMGB4Q8WW32 ITCH-AS1-201ENST00000454205 299 ntTSL 5 BASIC3.21□□□□□ -1.9
HMGB4Q8WW32 SNORA31.21-201ENST00000517180 77 ntBASIC3.21□□□□□ -1.9
HMGB4Q8WW32 AP000763.2-201ENST00000540641 163 ntBASIC3.21□□□□□ -1.9
HMGB4Q8WW32 AC113146.1-202ENST00000560259 433 ntTSL 5 BASIC3.21□□□□□ -1.9
HMGB4Q8WW32 AC005730.3-201ENST00000583067 366 ntBASIC3.21□□□□□ -1.9
HMGB4Q8WW32 MIR5692C1-201ENST00000585309 91 ntBASIC3.21□□□□□ -1.9
HMGB4Q8WW32 AL033523.1-201ENST00000605153 153 ntBASIC3.21□□□□□ -1.9
HMGB4Q8WW32 AC087045.1-201ENST00000605856 382 ntBASIC3.21□□□□□ -1.9
HMGB4Q8WW32 AC022306.2-201ENST00000617563 647 ntBASIC3.21□□□□□ -1.9
HMGB4Q8WW32 MIR6134-201ENST00000617606 109 ntBASIC3.21□□□□□ -1.9
HMGB4Q8WW32 HOTTIP_4.1-201ENST00000618195 165 ntBASIC3.21□□□□□ -1.9
HMGB4Q8WW32 AC092794.2-201ENST00000620933 563 ntBASIC3.21□□□□□ -1.9
HMGB4Q8WW32 CATSPERB-201ENST00000256343 3623 ntAPPRIS P2 TSL 1 (best) BASIC3.21□□□□□ -1.9
HMGB4Q8WW32 AC009487.2-201ENST00000420969 6821 ntBASIC3.2□□□□□ -1.9
HMGB4Q8WW32 IL23R-205ENST00000637002 2208 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
HMGB4Q8WW32 CCDC30-212ENST00000507855 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC3.2□□□□□ -1.9
HMGB4Q8WW32 LRRTM2-201ENST00000274711 6017 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
HMGB4Q8WW32 OR6C1-202ENST00000642104 2055 ntAPPRIS P1 BASIC3.2□□□□□ -1.9
HMGB4Q8WW32 CBX3P1-201ENST00000325243 554 ntBASIC3.2□□□□□ -1.9
HMGB4Q8WW32 RNU6-254P-201ENST00000363377 107 ntBASIC3.2□□□□□ -1.9
HMGB4Q8WW32 RNU6-898P-201ENST00000365627 104 ntBASIC3.2□□□□□ -1.9
HMGB4Q8WW32 Y_RNA.414-201ENST00000384011 101 ntBASIC3.2□□□□□ -1.9
HMGB4Q8WW32 RNU6-767P-201ENST00000384132 107 ntBASIC3.2□□□□□ -1.9
HMGB4Q8WW32 RNU6-831P-201ENST00000384548 107 ntBASIC3.2□□□□□ -1.9
HMGB4Q8WW32 MIR34A-201ENST00000385130 110 ntBASIC3.2□□□□□ -1.9
HMGB4Q8WW32 OPRPN-201ENST00000399575 1040 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
HMGB4Q8WW32 MORN2-203ENST00000409131 544 ntTSL 5 BASIC3.2□□□□□ -1.9
HMGB4Q8WW32 AC023141.4-201ENST00000412031 328 ntBASIC3.2□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 75.2 ms