Protein–RNA interactions for Protein: Q8TCU4

ALMS1, Alstrom syndrome protein 1, humanhuman

Predictions only

Length 4,167 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALMS1Q8TCU4 AC018693.1-201ENST00000442829 550 ntTSL 4 BASIC0.24□□□□□ -2.37
ALMS1Q8TCU4 AC104164.3-201ENST00000467363 1258 ntBASIC0.24□□□□□ -2.37
ALMS1Q8TCU4 RNU7-40P-201ENST00000516397 64 ntBASIC0.24□□□□□ -2.37
ALMS1Q8TCU4 AC034114.1-201ENST00000520293 285 ntBASIC0.24□□□□□ -2.37
ALMS1Q8TCU4 AL356133.2-201ENST00000521572 371 ntTSL 3 BASIC0.24□□□□□ -2.37
ALMS1Q8TCU4 AP003122.4-201ENST00000530980 758 ntBASIC0.24□□□□□ -2.37
ALMS1Q8TCU4 AC007834.2-201ENST00000536310 343 ntBASIC0.24□□□□□ -2.37
ALMS1Q8TCU4 RERG-IT1-201ENST00000539734 301 ntTSL 3 BASIC0.24□□□□□ -2.37
ALMS1Q8TCU4 MT-CYB-201ENST00000361789 1141 ntAPPRIS P1 BASIC0.24□□□□□ -2.37
ALMS1Q8TCU4 S100A12-201ENST00000368737 518 ntAPPRIS P1 TSL 1 (best) BASIC0.24□□□□□ -2.37
ALMS1Q8TCU4 SEC61A2-203ENST00000379017 600 ntTSL 5 BASIC0.24□□□□□ -2.37
ALMS1Q8TCU4 AC096649.2-201ENST00000416186 393 ntBASIC0.24□□□□□ -2.37
ALMS1Q8TCU4 AL162399.1-201ENST00000426090 130 ntTSL 3 BASIC0.24□□□□□ -2.37
ALMS1Q8TCU4 AL606489.2-201ENST00000433886 234 ntBASIC0.24□□□□□ -2.37
ALMS1Q8TCU4 AC004492.1-201ENST00000607036 742 ntBASIC0.24□□□□□ -2.37
ALMS1Q8TCU4 MIR424-201ENST00000362227 98 ntBASIC0.24□□□□□ -2.37
ALMS1Q8TCU4 RNU6-72P-201ENST00000384285 79 ntBASIC0.24□□□□□ -2.37
ALMS1Q8TCU4 RNU11-3P-201ENST00000391111 133 ntBASIC0.24□□□□□ -2.37
ALMS1Q8TCU4 AL358972.1-201ENST00000434356 466 ntTSL 2 BASIC0.24□□□□□ -2.37
ALMS1Q8TCU4 TRBVA-201ENST00000498804 316 ntBASIC0.24□□□□□ -2.37
ALMS1Q8TCU4 AC092718.6-202ENST00000563072 408 ntTSL 2 BASIC0.24□□□□□ -2.37
ALMS1Q8TCU4 ITFG1-AS1-202ENST00000565694 494 ntTSL 2 BASIC0.24□□□□□ -2.37
ALMS1Q8TCU4 AC055876.5-201ENST00000605667 259 ntBASIC0.24□□□□□ -2.37
ALMS1Q8TCU4 C8orf59-208ENST00000612809 475 ntAPPRIS P1 TSL 1 (best) BASIC0.24□□□□□ -2.37
ALMS1Q8TCU4 SERPINI2-209ENST00000616363 1769 ntTSL 5 BASIC0.23□□□□□ -2.37
ALMS1Q8TCU4 RNU5E-1-201ENST00000362477 120 ntBASIC0.23□□□□□ -2.37
ALMS1Q8TCU4 MIR561-201ENST00000385216 97 ntBASIC0.23□□□□□ -2.37
ALMS1Q8TCU4 OFD1P18Y-201ENST00000420889 959 ntBASIC0.23□□□□□ -2.37
ALMS1Q8TCU4 AC092573.2-201ENST00000434546 243 ntBASIC0.23□□□□□ -2.37
ALMS1Q8TCU4 MTCO1P44-201ENST00000441935 243 ntBASIC0.23□□□□□ -2.37
ALMS1Q8TCU4 LINC01487-202ENST00000490497 423 ntTSL 3 BASIC0.23□□□□□ -2.37
ALMS1Q8TCU4 AC138853.1-201ENST00000503549 823 ntBASIC0.23□□□□□ -2.37
ALMS1Q8TCU4 AC009930.1-201ENST00000522330 191 ntTSL 5 BASIC0.23□□□□□ -2.37
ALMS1Q8TCU4 MRPL42-203ENST00000547098 701 ntTSL 3 BASIC0.23□□□□□ -2.37
ALMS1Q8TCU4 LSM6P2-201ENST00000552208 177 ntBASIC0.23□□□□□ -2.37
ALMS1Q8TCU4 AC087481.2-201ENST00000565492 330 ntBASIC0.23□□□□□ -2.37
ALMS1Q8TCU4 AC130650.1-201ENST00000570581 415 ntTSL 2 BASIC0.23□□□□□ -2.37
ALMS1Q8TCU4 AC015688.2-201ENST00000584523 262 ntBASIC0.23□□□□□ -2.37
ALMS1Q8TCU4 CLIC4P2-201ENST00000601934 717 ntBASIC0.23□□□□□ -2.37
ALMS1Q8TCU4 AC068620.3-201ENST00000602749 560 ntBASIC0.23□□□□□ -2.37
ALMS1Q8TCU4 AC018638.7-201ENST00000605836 1114 ntBASIC0.23□□□□□ -2.37
ALMS1Q8TCU4 AC009974.1-201ENST00000608881 455 ntBASIC0.23□□□□□ -2.37
ALMS1Q8TCU4 AP005229.2-201ENST00000609980 697 ntBASIC0.23□□□□□ -2.37
ALMS1Q8TCU4 RNU4-23P-201ENST00000362839 140 ntBASIC0.23□□□□□ -2.37
ALMS1Q8TCU4 RNA5SP368-201ENST00000364298 116 ntBASIC0.23□□□□□ -2.37
ALMS1Q8TCU4 AC016065.2-201ENST00000514530 444 ntBASIC0.23□□□□□ -2.37
ALMS1Q8TCU4 AC113192.4-201ENST00000534666 547 ntTSL 4 BASIC0.23□□□□□ -2.37
ALMS1Q8TCU4 AC021739.1-201ENST00000559631 174 ntBASIC0.23□□□□□ -2.37
ALMS1Q8TCU4 MIR5190-201ENST00000581537 80 ntBASIC0.23□□□□□ -2.37
ALMS1Q8TCU4 AL138963.2-201ENST00000605137 226 ntBASIC0.23□□□□□ -2.37
ALMS1Q8TCU4 CYLC1-202ENST00000621735 379 ntAPPRIS ALT2 TSL 3 BASIC0.23□□□□□ -2.37
ALMS1Q8TCU4 AC068057.2-201ENST00000624047 895 ntBASIC0.23□□□□□ -2.37
ALMS1Q8TCU4 MTND5P30-201ENST00000452896 1731 ntBASIC0.23□□□□□ -2.37
ALMS1Q8TCU4 TBC1D31-206ENST00000518805 2201 ntTSL 2 BASIC0.23□□□□□ -2.37
ALMS1Q8TCU4 AC005832.2-201ENST00000538921 1430 ntBASIC0.23□□□□□ -2.37
ALMS1Q8TCU4 RNU6-30P-201ENST00000384561 107 ntBASIC0.23□□□□□ -2.37
ALMS1Q8TCU4 RNA5SP63-201ENST00000391225 112 ntBASIC0.23□□□□□ -2.37
ALMS1Q8TCU4 SSR1P1-201ENST00000407630 814 ntBASIC0.23□□□□□ -2.37
ALMS1Q8TCU4 MTCO3P4-201ENST00000419236 787 ntBASIC0.23□□□□□ -2.37
ALMS1Q8TCU4 AC083875.1-201ENST00000419509 405 ntBASIC0.23□□□□□ -2.37
ALMS1Q8TCU4 U51244.1-201ENST00000423120 374 ntTSL 3 BASIC0.23□□□□□ -2.37
ALMS1Q8TCU4 NDUFA5P10-201ENST00000432147 357 ntBASIC0.23□□□□□ -2.37
ALMS1Q8TCU4 AC245102.2-201ENST00000448956 180 ntBASIC0.23□□□□□ -2.37
ALMS1Q8TCU4 BUD31P2-201ENST00000449374 300 ntBASIC0.23□□□□□ -2.37
ALMS1Q8TCU4 AL163195.1-201ENST00000496941 348 ntBASIC0.23□□□□□ -2.37
ALMS1Q8TCU4 AL356432.3-201ENST00000568952 465 ntBASIC0.23□□□□□ -2.37
ALMS1Q8TCU4 ANKRD36BP2-206ENST00000575193 1245 ntBASIC0.23□□□□□ -2.37
ALMS1Q8TCU4 AL365204.3-201ENST00000612448 685 ntBASIC0.23□□□□□ -2.37
ALMS1Q8TCU4 MIR198-201ENST00000637333 62 ntBASIC0.23□□□□□ -2.37
ALMS1Q8TCU4 AC104629.2-201ENST00000468627 598 ntBASIC0.22□□□□□ -2.37
ALMS1Q8TCU4 AC068880.2-201ENST00000521016 362 ntTSL 5 BASIC0.22□□□□□ -2.37
ALMS1Q8TCU4 AC091489.2-201ENST00000566263 604 ntBASIC0.22□□□□□ -2.37
ALMS1Q8TCU4 AL157938.2-209ENST00000589128 792 ntTSL 2 BASIC0.22□□□□□ -2.37
ALMS1Q8TCU4 AC092071.1-201ENST00000597260 549 ntTSL 5 BASIC0.22□□□□□ -2.37
ALMS1Q8TCU4 AC084824.5-201ENST00000612009 413 ntBASIC0.22□□□□□ -2.37
ALMS1Q8TCU4 FAM206A-202ENST00000374624 499 ntTSL 3 BASIC0.22□□□□□ -2.37
ALMS1Q8TCU4 AC023141.4-201ENST00000412031 328 ntBASIC0.22□□□□□ -2.37
ALMS1Q8TCU4 AC006461.1-201ENST00000412637 326 ntBASIC0.22□□□□□ -2.37
ALMS1Q8TCU4 AL159990.1-201ENST00000415119 337 ntTSL 3 BASIC0.22□□□□□ -2.37
ALMS1Q8TCU4 RPL23AP95-201ENST00000426806 265 ntBASIC0.22□□□□□ -2.37
ALMS1Q8TCU4 MIR4435-2HG-206ENST00000432818 572 ntTSL 5 BASIC0.22□□□□□ -2.37
ALMS1Q8TCU4 AL159990.2-201ENST00000436491 337 ntTSL 3 BASIC0.22□□□□□ -2.37
ALMS1Q8TCU4 KATNBL1P6-201ENST00000453433 915 ntBASIC0.22□□□□□ -2.37
ALMS1Q8TCU4 POC1B-211ENST00000549504 581 ntTSL 5 BASIC0.22□□□□□ -2.37
ALMS1Q8TCU4 AC090888.1-201ENST00000561335 1141 ntBASIC0.22□□□□□ -2.37
ALMS1Q8TCU4 FAM60CP-201ENST00000591086 664 ntBASIC0.22□□□□□ -2.37
ALMS1Q8TCU4 AC010900.2-201ENST00000604508 210 ntBASIC0.22□□□□□ -2.37
ALMS1Q8TCU4 AC008498.1-201ENST00000613012 531 ntBASIC0.22□□□□□ -2.37
ALMS1Q8TCU4 U1.36-201ENST00000620684 176 ntBASIC0.22□□□□□ -2.37
ALMS1Q8TCU4 SMIM18-202ENST00000626298 114 ntTSL 5 BASIC0.22□□□□□ -2.37
ALMS1Q8TCU4 PRPSAP2-229ENST00000628609 192 ntTSL 5 BASIC0.22□□□□□ -2.37
ALMS1Q8TCU4 U3.8-201ENST00000363675 217 ntBASIC0.22□□□□□ -2.37
ALMS1Q8TCU4 RNU6-244P-201ENST00000391028 104 ntBASIC0.22□□□□□ -2.37
ALMS1Q8TCU4 AL356776.1-201ENST00000406574 447 ntBASIC0.22□□□□□ -2.37
ALMS1Q8TCU4 AC114737.2-201ENST00000421583 173 ntBASIC0.22□□□□□ -2.37
ALMS1Q8TCU4 TRAPPC13P1-201ENST00000435991 1062 ntBASIC0.22□□□□□ -2.37
ALMS1Q8TCU4 AC092691.3-201ENST00000482766 510 ntTSL 3 BASIC0.22□□□□□ -2.37
ALMS1Q8TCU4 DUXAP1-201ENST00000556632 463 ntBASIC0.22□□□□□ -2.37
ALMS1Q8TCU4 DLEU1_2.1-201ENST00000617920 342 ntBASIC0.22□□□□□ -2.37
ALMS1Q8TCU4 Y_RNA.62-201ENST00000362840 99 ntBASIC0.21□□□□□ -2.38
Retrieved 100 of 98,524 protein–RNA pairs in 118.3 ms