Protein–RNA interactions for Protein: Q8TAU0

NKX2-3, Homeobox protein Nkx-2.3, humanhuman

Predictions only

Length 364 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-3Q8TAU0 PCBP1-AS1-307ENST00000627050 912 ntTSL 5 BASIC5.48□□□□□ -1.53
NKX2-3Q8TAU0 ANO3-204ENST00000531568 3117 ntAPPRIS ALT2 TSL 2 BASIC5.48□□□□□ -1.53
NKX2-3Q8TAU0 ABCB5-202ENST00000404938 5811 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
NKX2-3Q8TAU0 TC2N-203ENST00000435962 5146 ntAPPRIS P1 TSL 2 BASIC5.48□□□□□ -1.53
NKX2-3Q8TAU0 DST-205ENST00000370765 8999 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
NKX2-3Q8TAU0 SAMD12-202ENST00000409003 8866 ntAPPRIS P1 TSL 5 BASIC5.48□□□□□ -1.53
NKX2-3Q8TAU0 C15orf41-212ENST00000567389 2618 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
NKX2-3Q8TAU0 NADK2-203ENST00000397338 3614 ntTSL 2 BASIC5.47□□□□□ -1.53
NKX2-3Q8TAU0 ANKRD34C-201ENST00000421388 4951 ntAPPRIS P1 BASIC5.47□□□□□ -1.53
NKX2-3Q8TAU0 CLUL1-213ENST00000620089 1947 ntTSL 5 BASIC5.47□□□□□ -1.53
NKX2-3Q8TAU0 RNU6-159P-201ENST00000391080 106 ntBASIC5.47□□□□□ -1.53
NKX2-3Q8TAU0 RPS26P8-201ENST00000393490 348 ntBASIC5.47□□□□□ -1.53
NKX2-3Q8TAU0 SNORA11F-201ENST00000408237 128 ntBASIC5.47□□□□□ -1.53
NKX2-3Q8TAU0 AL513331.1-201ENST00000411908 397 ntBASIC5.47□□□□□ -1.53
NKX2-3Q8TAU0 EIF1AXP1-201ENST00000419267 435 ntBASIC5.47□□□□□ -1.53
NKX2-3Q8TAU0 LAMTOR3P1-201ENST00000428620 370 ntBASIC5.47□□□□□ -1.53
NKX2-3Q8TAU0 AC090617.2-201ENST00000433167 404 ntTSL 3 BASIC5.47□□□□□ -1.53
NKX2-3Q8TAU0 ARHGAP26-IT1-201ENST00000433186 388 ntTSL 3 BASIC5.47□□□□□ -1.53
NKX2-3Q8TAU0 AL136369.1-201ENST00000437825 244 ntTSL 5 BASIC5.47□□□□□ -1.53
NKX2-3Q8TAU0 AC092162.2-204ENST00000451851 566 ntTSL 4 BASIC5.47□□□□□ -1.53
NKX2-3Q8TAU0 SCARNA10-201ENST00000459255 330 ntBASIC5.47□□□□□ -1.53
NKX2-3Q8TAU0 AC091167.1-201ENST00000492017 396 ntBASIC5.47□□□□□ -1.53
NKX2-3Q8TAU0 RNA5SP471-201ENST00000516971 106 ntBASIC5.47□□□□□ -1.53
NKX2-3Q8TAU0 AP001781.1-201ENST00000530977 207 ntBASIC5.47□□□□□ -1.53
NKX2-3Q8TAU0 AC109810.1-201ENST00000534066 224 ntBASIC5.47□□□□□ -1.53
NKX2-3Q8TAU0 THEMIS-204ENST00000537166 3830 ntAPPRIS ALT2 TSL 2 BASIC5.47□□□□□ -1.53
NKX2-3Q8TAU0 SNHG1-219ENST00000542112 780 ntTSL 3 BASIC5.47□□□□□ -1.53
NKX2-3Q8TAU0 NACAP3-201ENST00000552100 481 ntBASIC5.47□□□□□ -1.53
NKX2-3Q8TAU0 LINC02277-202ENST00000556472 453 ntTSL 3 BASIC5.47□□□□□ -1.53
NKX2-3Q8TAU0 KIAA1524-208ENST00000625495 147 ntTSL 5 BASIC5.47□□□□□ -1.53
NKX2-3Q8TAU0 MYNN-203ENST00000544106 4815 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
NKX2-3Q8TAU0 RMDN2-203ENST00000402091 1973 ntTSL 2 BASIC5.47□□□□□ -1.53
NKX2-3Q8TAU0 CP-201ENST00000264613 4676 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
NKX2-3Q8TAU0 SKP1-209ENST00000522552 1683 ntAPPRIS ALT1 TSL 1 (best) BASIC5.47□□□□□ -1.53
NKX2-3Q8TAU0 FBXL13-207ENST00000455112 2274 ntTSL 1 (best) BASIC5.46□□□□□ -1.53
NKX2-3Q8TAU0 C6orf10-207ENST00000533191 2170 ntAPPRIS ALT2 TSL 1 (best) BASIC5.46□□□□□ -1.53
NKX2-3Q8TAU0 NSD1-204ENST00000439151 12892 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.53
NKX2-3Q8TAU0 RPGRIP1L-201ENST00000262135 8195 ntAPPRIS P3 TSL 5 BASIC5.46□□□□□ -1.53
NKX2-3Q8TAU0 LINC01239-202ENST00000436786 2347 ntTSL 2 BASIC5.46□□□□□ -1.54
NKX2-3Q8TAU0 TIPARP-207ENST00000542783 3681 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
NKX2-3Q8TAU0 ZBTB21-201ENST00000310826 7449 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
NKX2-3Q8TAU0 RN7SKP224-201ENST00000364140 325 ntBASIC5.46□□□□□ -1.54
NKX2-3Q8TAU0 CXorf65-201ENST00000374251 601 ntAPPRIS P1 TSL 5 BASIC5.46□□□□□ -1.54
NKX2-3Q8TAU0 RN7SKP167-201ENST00000411047 285 ntBASIC5.46□□□□□ -1.54
NKX2-3Q8TAU0 AL360169.1-201ENST00000435116 143 ntTSL 5 BASIC5.46□□□□□ -1.54
NKX2-3Q8TAU0 AC114501.3-201ENST00000453648 164 ntTSL 5 BASIC5.46□□□□□ -1.54
NKX2-3Q8TAU0 RPL23AP24-201ENST00000458203 385 ntBASIC5.46□□□□□ -1.54
NKX2-3Q8TAU0 Y_RNA.651-201ENST00000459380 103 ntBASIC5.46□□□□□ -1.54
NKX2-3Q8TAU0 RN7SL303P-201ENST00000469773 251 ntBASIC5.46□□□□□ -1.54
NKX2-3Q8TAU0 AC009446.1-202ENST00000521131 473 ntTSL 3 BASIC5.46□□□□□ -1.54
NKX2-3Q8TAU0 AC021269.2-201ENST00000532318 330 ntBASIC5.46□□□□□ -1.54
NKX2-3Q8TAU0 AC026992.1-202ENST00000558454 421 ntTSL 3 BASIC5.46□□□□□ -1.54
NKX2-3Q8TAU0 AF001550.1-201ENST00000572747 573 ntTSL 4 BASIC5.46□□□□□ -1.54
NKX2-3Q8TAU0 MIR5695-201ENST00000579717 85 ntBASIC5.46□□□□□ -1.54
NKX2-3Q8TAU0 MIR3145-201ENST00000580727 82 ntBASIC5.46□□□□□ -1.54
NKX2-3Q8TAU0 MIR3138-201ENST00000585238 82 ntBASIC5.46□□□□□ -1.54
NKX2-3Q8TAU0 AP005019.3-201ENST00000620418 560 ntBASIC5.46□□□□□ -1.54
NKX2-3Q8TAU0 LINC00276-202ENST00000418420 3503 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
NKX2-3Q8TAU0 DHX9P1-201ENST00000436565 3076 ntBASIC5.46□□□□□ -1.54
NKX2-3Q8TAU0 AC096751.1-201ENST00000515178 2202 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
NKX2-3Q8TAU0 PIGN-210ENST00000588571 1960 ntTSL 5 BASIC5.46□□□□□ -1.54
NKX2-3Q8TAU0 PEX5L-202ENST00000392649 8540 ntAPPRIS ALT2 TSL 5 BASIC5.45□□□□□ -1.54
NKX2-3Q8TAU0 ARHGAP18-201ENST00000368149 4462 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
NKX2-3Q8TAU0 PRUNE2-207ENST00000428286 12437 ntTSL 5 BASIC5.45□□□□□ -1.54
NKX2-3Q8TAU0 MIR10A-201ENST00000385043 110 ntBASIC5.45□□□□□ -1.54
NKX2-3Q8TAU0 TRAJ4-201ENST00000390533 63 ntAPPRIS P1 BASIC5.45□□□□□ -1.54
NKX2-3Q8TAU0 HLFP1-201ENST00000402375 499 ntBASIC5.45□□□□□ -1.54
NKX2-3Q8TAU0 RNY4P30-201ENST00000410216 95 ntBASIC5.45□□□□□ -1.54
NKX2-3Q8TAU0 SSXP9-201ENST00000417503 292 ntBASIC5.45□□□□□ -1.54
NKX2-3Q8TAU0 LINC01341-201ENST00000419361 552 ntTSL 2 BASIC5.45□□□□□ -1.54
NKX2-3Q8TAU0 AC004870.4-201ENST00000424359 360 ntTSL 2 BASIC5.45□□□□□ -1.54
NKX2-3Q8TAU0 CYCSP32-201ENST00000440548 321 ntBASIC5.45□□□□□ -1.54
NKX2-3Q8TAU0 AC124916.1-201ENST00000444020 547 ntBASIC5.45□□□□□ -1.54
NKX2-3Q8TAU0 AC012081.1-201ENST00000462382 477 ntTSL 3 BASIC5.45□□□□□ -1.54
NKX2-3Q8TAU0 AF186996.7-201ENST00000492781 209 ntBASIC5.45□□□□□ -1.54
NKX2-3Q8TAU0 ENSA-210ENST00000503241 574 ntTSL 3 BASIC5.45□□□□□ -1.54
NKX2-3Q8TAU0 GYPA-208ENST00000512064 441 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
NKX2-3Q8TAU0 AC095350.2-201ENST00000544034 201 ntTSL 5 BASIC5.45□□□□□ -1.54
NKX2-3Q8TAU0 UBL5P4-201ENST00000562584 236 ntBASIC5.45□□□□□ -1.54
NKX2-3Q8TAU0 AC007493.1-202ENST00000567899 517 ntTSL 2 BASIC5.45□□□□□ -1.54
NKX2-3Q8TAU0 MIR3121-201ENST00000579680 77 ntBASIC5.45□□□□□ -1.54
NKX2-3Q8TAU0 AL078604.3-201ENST00000615580 211 ntBASIC5.45□□□□□ -1.54
NKX2-3Q8TAU0 U3.53-201ENST00000628922 216 ntBASIC5.45□□□□□ -1.54
NKX2-3Q8TAU0 AL034408.1-202ENST00000636088 415 ntBASIC5.45□□□□□ -1.54
NKX2-3Q8TAU0 CAPZA2-215ENST00000639546 129 ntTSL 5 BASIC5.45□□□□□ -1.54
NKX2-3Q8TAU0 OR8H2-203ENST00000641311 3092 ntAPPRIS P2 BASIC5.45□□□□□ -1.54
NKX2-3Q8TAU0 CCNT1-205ENST00000618666 6915 ntTSL 2 BASIC5.45□□□□□ -1.54
NKX2-3Q8TAU0 UBA6-AS1-203ENST00000500538 3352 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
NKX2-3Q8TAU0 CYLD-212ENST00000568704 3292 ntTSL 5 BASIC5.45□□□□□ -1.54
NKX2-3Q8TAU0 ATP13A4-203ENST00000392443 4016 ntTSL 5 BASIC5.44□□□□□ -1.54
NKX2-3Q8TAU0 AL139811.1-201ENST00000424779 2299 ntBASIC5.44□□□□□ -1.54
NKX2-3Q8TAU0 LINGO2-201ENST00000308675 3031 ntAPPRIS P1 TSL 5 BASIC5.44□□□□□ -1.54
NKX2-3Q8TAU0 OR14L1P-202ENST00000641545 3009 ntBASIC5.44□□□□□ -1.54
NKX2-3Q8TAU0 PLD1-203ENST00000356327 5855 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
NKX2-3Q8TAU0 CDH17-201ENST00000027335 3693 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
NKX2-3Q8TAU0 SNORA25.7-201ENST00000364375 127 ntBASIC5.44□□□□□ -1.54
NKX2-3Q8TAU0 RNU6-1180P-201ENST00000364935 107 ntBASIC5.44□□□□□ -1.54
NKX2-3Q8TAU0 SNORA72.2-201ENST00000365028 127 ntBASIC5.44□□□□□ -1.54
NKX2-3Q8TAU0 Y_RNA.319-201ENST00000365138 92 ntBASIC5.44□□□□□ -1.54
NKX2-3Q8TAU0 RNU5E-7P-201ENST00000365290 117 ntBASIC5.44□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 166.4 ms