Protein–RNA interactions for Protein: Q8NFH3

NUP43, Nucleoporin Nup43, humanhuman

Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP43Q8NFH3 MIR1193-201ENST00000408109 78 ntBASIC3.92□□□□□ -1.78
NUP43Q8NFH3 MIR1290-201ENST00000408735 78 ntBASIC3.92□□□□□ -1.78
NUP43Q8NFH3 LINC01341-201ENST00000419361 552 ntTSL 2 BASIC3.92□□□□□ -1.78
NUP43Q8NFH3 AC098614.2-201ENST00000426040 255 ntBASIC3.92□□□□□ -1.78
NUP43Q8NFH3 RPL23AP46-201ENST00000438548 490 ntBASIC3.92□□□□□ -1.78
NUP43Q8NFH3 AL121760.1-201ENST00000447206 346 ntTSL 2 BASIC3.92□□□□□ -1.78
NUP43Q8NFH3 snoU109.2-201ENST00000459316 135 ntBASIC3.92□□□□□ -1.78
NUP43Q8NFH3 AC006517.1-201ENST00000480485 328 ntBASIC3.92□□□□□ -1.78
NUP43Q8NFH3 AC093840.1-201ENST00000511599 336 ntBASIC3.92□□□□□ -1.78
NUP43Q8NFH3 RNU7-175P-201ENST00000515915 61 ntBASIC3.92□□□□□ -1.78
NUP43Q8NFH3 SNORA70.16-201ENST00000516390 95 ntBASIC3.92□□□□□ -1.78
NUP43Q8NFH3 TMEM106C-220ENST00000552561 810 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
NUP43Q8NFH3 AC090510.1-201ENST00000567456 425 ntTSL 3 BASIC3.92□□□□□ -1.78
NUP43Q8NFH3 AC003687.1-201ENST00000578040 427 ntTSL 3 BASIC3.92□□□□□ -1.78
NUP43Q8NFH3 MIR4277-201ENST00000578298 84 ntBASIC3.92□□□□□ -1.78
NUP43Q8NFH3 RPL38-208ENST00000584577 344 ntAPPRIS ALT1 TSL 3 BASIC3.92□□□□□ -1.78
NUP43Q8NFH3 BX284668.6-201ENST00000606899 438 ntBASIC3.92□□□□□ -1.78
NUP43Q8NFH3 SMAD5-AS1_1.1-201ENST00000619886 266 ntBASIC3.92□□□□□ -1.78
NUP43Q8NFH3 CCT7-217ENST00000626868 249 ntTSL 5 BASIC3.92□□□□□ -1.78
NUP43Q8NFH3 UBE2E2-207ENST00000628311 267 ntTSL 5 BASIC3.92□□□□□ -1.78
NUP43Q8NFH3 AL807742.1-203ENST00000637444 759 ntTSL 5 BASIC3.92□□□□□ -1.78
NUP43Q8NFH3 GYPB-216ENST00000638448 363 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
NUP43Q8NFH3 EFHC1-205ENST00000538167 5308 ntTSL 5 BASIC3.92□□□□□ -1.78
NUP43Q8NFH3 PLAG1-201ENST00000316981 7322 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
NUP43Q8NFH3 MBD5-202ENST00000407073 9512 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
NUP43Q8NFH3 RAPH1-203ENST00000374493 3909 ntAPPRIS ALT2 TSL 5 BASIC3.92□□□□□ -1.78
NUP43Q8NFH3 ZMYND11-217ENST00000627286 3914 ntTSL 5 BASIC3.92□□□□□ -1.78
NUP43Q8NFH3 PIGW-206ENST00000620233 2264 ntAPPRIS P1 TSL 2 BASIC3.92□□□□□ -1.78
NUP43Q8NFH3 AKAP7-209ENST00000541650 2008 ntTSL 5 BASIC3.92□□□□□ -1.78
NUP43Q8NFH3 ZSCAN26-204ENST00000614088 2321 ntTSL 3 BASIC3.92□□□□□ -1.78
NUP43Q8NFH3 ZC3H11A-214ENST00000639812 11825 ntAPPRIS P1 TSL 5 BASIC3.92□□□□□ -1.78
NUP43Q8NFH3 NCOA1-202ENST00000348332 6895 ntAPPRIS P4 TSL 1 (best) BASIC3.91□□□□□ -1.78
NUP43Q8NFH3 MMRN1-204ENST00000508372 3234 ntTSL 2 BASIC3.91□□□□□ -1.78
NUP43Q8NFH3 PSG1-205ENST00000595124 1692 ntTSL 2 BASIC3.91□□□□□ -1.78
NUP43Q8NFH3 ADGRG2-201ENST00000340581 3594 ntTSL 2 BASIC3.91□□□□□ -1.78
NUP43Q8NFH3 AC092650.1-201ENST00000447571 1808 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
NUP43Q8NFH3 RBM39-201ENST00000253363 2488 ntAPPRIS P4 TSL 1 (best) BASIC3.91□□□□□ -1.78
NUP43Q8NFH3 AL157777.2-201ENST00000258070 137 ntBASIC3.91□□□□□ -1.78
NUP43Q8NFH3 CCDC82-201ENST00000278520 2941 ntAPPRIS P2 TSL 5 BASIC3.91□□□□□ -1.78
NUP43Q8NFH3 RNU1-132P-201ENST00000364300 164 ntBASIC3.91□□□□□ -1.78
NUP43Q8NFH3 RNU6-72P-201ENST00000384285 79 ntBASIC3.91□□□□□ -1.78
NUP43Q8NFH3 MIR513A2-201ENST00000385249 127 ntBASIC3.91□□□□□ -1.78
NUP43Q8NFH3 TRAV9-2-201ENST00000390441 394 ntAPPRIS P1 BASIC3.91□□□□□ -1.78
NUP43Q8NFH3 AL079342.1-201ENST00000401460 267 ntBASIC3.91□□□□□ -1.78
NUP43Q8NFH3 Z82188.1-201ENST00000436709 154 ntBASIC3.91□□□□□ -1.78
NUP43Q8NFH3 AL136369.1-201ENST00000437825 244 ntTSL 5 BASIC3.91□□□□□ -1.78
NUP43Q8NFH3 AL139383.1-203ENST00000445227 420 ntTSL 3 BASIC3.91□□□□□ -1.78
NUP43Q8NFH3 DLG1-217ENST00000452595 3053 ntTSL 2 BASIC3.91□□□□□ -1.78
NUP43Q8NFH3 AL645939.1-201ENST00000453429 797 ntBASIC3.91□□□□□ -1.78
NUP43Q8NFH3 AL354824.2-201ENST00000458004 446 ntTSL 3 BASIC3.91□□□□□ -1.78
NUP43Q8NFH3 RN7SL303P-201ENST00000469773 251 ntBASIC3.91□□□□□ -1.78
NUP43Q8NFH3 AC109327.1-201ENST00000471666 403 ntBASIC3.91□□□□□ -1.78
NUP43Q8NFH3 AC098851.1-201ENST00000476561 570 ntTSL 4 BASIC3.91□□□□□ -1.78
NUP43Q8NFH3 AC092440.1-201ENST00000512563 571 ntTSL 4 BASIC3.91□□□□□ -1.78
NUP43Q8NFH3 RNU6-1012P-201ENST00000516606 109 ntBASIC3.91□□□□□ -1.78
NUP43Q8NFH3 SNORA31.18-201ENST00000517043 134 ntBASIC3.91□□□□□ -1.78
NUP43Q8NFH3 CASP1P1-201ENST00000526345 212 ntBASIC3.91□□□□□ -1.78
NUP43Q8NFH3 OOSP2-203ENST00000532905 496 ntAPPRIS ALT2 TSL 3 BASIC3.91□□□□□ -1.78
NUP43Q8NFH3 AC010186.2-204ENST00000537668 439 ntBASIC3.91□□□□□ -1.78
NUP43Q8NFH3 AC069240.1-201ENST00000548774 375 ntBASIC3.91□□□□□ -1.78
NUP43Q8NFH3 AP002826.1-201ENST00000608835 315 ntBASIC3.91□□□□□ -1.78
NUP43Q8NFH3 AC008785.1-201ENST00000624475 456 ntBASIC3.91□□□□□ -1.78
NUP43Q8NFH3 MIR6830-201ENST00000636015 70 ntBASIC3.91□□□□□ -1.78
NUP43Q8NFH3 SLC38A2-209ENST00000551374 2802 ntTSL 2 BASIC3.91□□□□□ -1.78
NUP43Q8NFH3 ANKRD36C-202ENST00000456556 5428 ntAPPRIS P1 TSL 5 BASIC3.91□□□□□ -1.78
NUP43Q8NFH3 PRKACB-201ENST00000370680 1914 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
NUP43Q8NFH3 FEZ2-201ENST00000305852 1782 ntTSL 5 BASIC3.91□□□□□ -1.78
NUP43Q8NFH3 MTUS1-216ENST00000519263 4089 ntTSL 2 BASIC3.9□□□□□ -1.78
NUP43Q8NFH3 GPRC6A-203ENST00000530250 2310 ntTSL 1 (best) BASIC3.9□□□□□ -1.78
NUP43Q8NFH3 TLK1-206ENST00000434911 2156 ntTSL 2 BASIC3.9□□□□□ -1.78
NUP43Q8NFH3 LINC01505-206ENST00000637046 4266 ntTSL 5 BASIC3.9□□□□□ -1.78
NUP43Q8NFH3 RNF180-202ENST00000389100 4906 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.78
NUP43Q8NFH3 AC007390.2-201ENST00000606229 3803 ntBASIC3.9□□□□□ -1.78
NUP43Q8NFH3 BTAF1-204ENST00000544642 6938 ntAPPRIS ALT1 TSL 5 BASIC3.9□□□□□ -1.78
NUP43Q8NFH3 MAP3K21-201ENST00000366622 4005 ntTSL 1 (best) BASIC3.9□□□□□ -1.78
NUP43Q8NFH3 SNX16-212ENST00000615066 1918 ntTSL 5 BASIC3.9□□□□□ -1.78
NUP43Q8NFH3 MT-CO2-201ENST00000361739 684 ntAPPRIS P1 BASIC3.9□□□□□ -1.79
NUP43Q8NFH3 RNU6-886P-201ENST00000384319 105 ntBASIC3.9□□□□□ -1.79
NUP43Q8NFH3 PCNPP3-201ENST00000393579 471 ntBASIC3.9□□□□□ -1.79
NUP43Q8NFH3 RNU6ATAC34P-201ENST00000408879 121 ntBASIC3.9□□□□□ -1.79
NUP43Q8NFH3 RNU2-68P-201ENST00000410878 191 ntBASIC3.9□□□□□ -1.79
NUP43Q8NFH3 AL358453.1-201ENST00000422522 250 ntBASIC3.9□□□□□ -1.79
NUP43Q8NFH3 RPL21P40-201ENST00000428586 483 ntBASIC3.9□□□□□ -1.79
NUP43Q8NFH3 AC004975.1-201ENST00000428733 208 ntBASIC3.9□□□□□ -1.79
NUP43Q8NFH3 AL024508.1-201ENST00000432477 505 ntTSL 2 BASIC3.9□□□□□ -1.79
NUP43Q8NFH3 AL136097.1-201ENST00000456945 913 ntBASIC3.9□□□□□ -1.79
NUP43Q8NFH3 TOMM22P6-201ENST00000465035 409 ntBASIC3.9□□□□□ -1.79
NUP43Q8NFH3 RNA5SP154-201ENST00000516193 111 ntBASIC3.9□□□□□ -1.79
NUP43Q8NFH3 RNU6-789P-201ENST00000517105 102 ntBASIC3.9□□□□□ -1.79
NUP43Q8NFH3 AC104002.1-201ENST00000557025 380 ntTSL 3 BASIC3.9□□□□□ -1.79
NUP43Q8NFH3 TRAV28-201ENST00000557548 323 ntBASIC3.9□□□□□ -1.79
NUP43Q8NFH3 AC090617.3-201ENST00000573670 475 ntBASIC3.9□□□□□ -1.79
NUP43Q8NFH3 AC010928.2-201ENST00000588017 287 ntBASIC3.9□□□□□ -1.79
NUP43Q8NFH3 AC136601.2-201ENST00000604356 474 ntBASIC3.9□□□□□ -1.79
NUP43Q8NFH3 Y_RNA.772-201ENST00000606692 102 ntBASIC3.9□□□□□ -1.79
NUP43Q8NFH3 AC240442.1-201ENST00000616055 283 ntBASIC3.9□□□□□ -1.79
NUP43Q8NFH3 MACF1-231ENST00000564288 24828 ntAPPRIS ALT2 TSL 5 BASIC3.9□□□□□ -1.79
NUP43Q8NFH3 WDR72-204ENST00000559418 3602 ntTSL 5 BASIC3.9□□□□□ -1.79
NUP43Q8NFH3 IFI16-208ENST00000448393 2245 ntAPPRIS ALT2 TSL 5 BASIC3.9□□□□□ -1.79
NUP43Q8NFH3 RRAS2-202ENST00000414023 1884 ntTSL 2 BASIC3.9□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 102.8 ms