Protein–RNA interactions for Protein: Q8NEF3

CCDC112, Coiled-coil domain-containing protein 112, humanhuman

Predictions only

Length 446 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC112Q8NEF3 AC118469.1-201ENST00000442943 488 ntBASIC1.49□□□□□ -2.17
CCDC112Q8NEF3 GPM6BP1-201ENST00000446387 144 ntBASIC1.49□□□□□ -2.17
CCDC112Q8NEF3 AC139453.3-201ENST00000493276 369 ntBASIC1.49□□□□□ -2.17
CCDC112Q8NEF3 AC098862.1-201ENST00000504991 413 ntBASIC1.49□□□□□ -2.17
CCDC112Q8NEF3 AC113347.3-201ENST00000509113 148 ntBASIC1.49□□□□□ -2.17
CCDC112Q8NEF3 AC010261.1-201ENST00000514411 457 ntTSL 5 BASIC1.49□□□□□ -2.17
CCDC112Q8NEF3 Y_RNA.673-201ENST00000516306 88 ntBASIC1.49□□□□□ -2.17
CCDC112Q8NEF3 AL161670.1-201ENST00000554348 137 ntBASIC1.49□□□□□ -2.17
CCDC112Q8NEF3 AL133153.1-201ENST00000557756 303 ntBASIC1.49□□□□□ -2.17
CCDC112Q8NEF3 AC068338.1-201ENST00000565567 176 ntBASIC1.49□□□□□ -2.17
CCDC112Q8NEF3 AC060771.1-201ENST00000582031 164 ntBASIC1.49□□□□□ -2.17
CCDC112Q8NEF3 AC004987.4-201ENST00000603383 338 ntBASIC1.49□□□□□ -2.17
CCDC112Q8NEF3 AC090186.1-201ENST00000605991 572 ntBASIC1.49□□□□□ -2.17
CCDC112Q8NEF3 TMEM161B-210ENST00000511218 1351 ntTSL 2 BASIC1.48□□□□□ -2.17
CCDC112Q8NEF3 RNU1-23P-201ENST00000363361 144 ntBASIC1.48□□□□□ -2.17
CCDC112Q8NEF3 RNU6-188P-201ENST00000364207 107 ntBASIC1.48□□□□□ -2.17
CCDC112Q8NEF3 MEIG1-201ENST00000378240 507 ntAPPRIS P1 TSL 2 BASIC1.48□□□□□ -2.17
CCDC112Q8NEF3 SNORA40.19-201ENST00000390846 128 ntBASIC1.48□□□□□ -2.17
CCDC112Q8NEF3 MIR1287-201ENST00000408492 90 ntBASIC1.48□□□□□ -2.17
CCDC112Q8NEF3 MIR1283-2-201ENST00000408621 87 ntBASIC1.48□□□□□ -2.17
CCDC112Q8NEF3 RPL36AP53-201ENST00000432891 316 ntBASIC1.48□□□□□ -2.17
CCDC112Q8NEF3 MTCO1P53-201ENST00000441633 699 ntBASIC1.48□□□□□ -2.17
CCDC112Q8NEF3 EEF1E1P1-201ENST00000446998 430 ntBASIC1.48□□□□□ -2.17
CCDC112Q8NEF3 OR6C5P-201ENST00000452388 923 ntBASIC1.48□□□□□ -2.17
CCDC112Q8NEF3 AL390961.3-201ENST00000458171 485 ntTSL 5 BASIC1.48□□□□□ -2.17
CCDC112Q8NEF3 GUCA1C-203ENST00000471108 633 ntTSL 2 BASIC1.48□□□□□ -2.17
CCDC112Q8NEF3 RPL36AP48-201ENST00000485521 314 ntBASIC1.48□□□□□ -2.17
CCDC112Q8NEF3 AC093809.1-201ENST00000509155 340 ntBASIC1.48□□□□□ -2.17
CCDC112Q8NEF3 TPT1P8-201ENST00000510120 555 ntBASIC1.48□□□□□ -2.17
CCDC112Q8NEF3 SNORA31.3-201ENST00000516029 96 ntBASIC1.48□□□□□ -2.17
CCDC112Q8NEF3 RNU6-581P-201ENST00000516214 105 ntBASIC1.48□□□□□ -2.17
CCDC112Q8NEF3 SNORA48.11-201ENST00000517015 89 ntBASIC1.48□□□□□ -2.17
CCDC112Q8NEF3 AC026991.1-201ENST00000520815 463 ntTSL 3 BASIC1.48□□□□□ -2.17
CCDC112Q8NEF3 AC093012.1-202ENST00000549403 582 ntBASIC1.48□□□□□ -2.17
CCDC112Q8NEF3 MTND3P13-201ENST00000574391 343 ntBASIC1.48□□□□□ -2.17
CCDC112Q8NEF3 AL157938.2-201ENST00000587264 894 ntTSL 5 BASIC1.48□□□□□ -2.17
CCDC112Q8NEF3 AL713866.2-201ENST00000603579 219 ntBASIC1.48□□□□□ -2.17
CCDC112Q8NEF3 RPL21P136-201ENST00000605378 396 ntBASIC1.48□□□□□ -2.17
CCDC112Q8NEF3 AC079610.3-201ENST00000606960 147 ntTSL 3 BASIC1.48□□□□□ -2.17
CCDC112Q8NEF3 AC126544.2-201ENST00000625174 749 ntBASIC1.48□□□□□ -2.17
CCDC112Q8NEF3 AC006355.2-201ENST00000629240 317 ntTSL 3 BASIC1.48□□□□□ -2.17
CCDC112Q8NEF3 AC097655.1-201ENST00000635075 318 ntBASIC1.48□□□□□ -2.17
CCDC112Q8NEF3 AC091812.1-201ENST00000432235 1948 ntBASIC1.48□□□□□ -2.17
CCDC112Q8NEF3 LRIF1-203ENST00000494675 1912 ntAPPRIS ALT2 TSL 2 BASIC1.48□□□□□ -2.17
CCDC112Q8NEF3 AC069228.1-201ENST00000546936 1615 ntTSL 3 BASIC1.48□□□□□ -2.17
CCDC112Q8NEF3 SNORA7.1-201ENST00000363750 139 ntBASIC1.47□□□□□ -2.17
CCDC112Q8NEF3 RNU6-512P-201ENST00000364438 103 ntBASIC1.47□□□□□ -2.17
CCDC112Q8NEF3 SNORA25.9-201ENST00000365087 128 ntBASIC1.47□□□□□ -2.17
CCDC112Q8NEF3 TSACC-205ENST00000368255 751 ntAPPRIS P1 TSL 1 (best) BASIC1.47□□□□□ -2.17
CCDC112Q8NEF3 RNU6-203P-201ENST00000384038 104 ntBASIC1.47□□□□□ -2.17
CCDC112Q8NEF3 AL449283.1-202ENST00000418249 604 ntBASIC1.47□□□□□ -2.17
CCDC112Q8NEF3 AL139237.2-201ENST00000438454 493 ntTSL 3 BASIC1.47□□□□□ -2.17
CCDC112Q8NEF3 AC006333.1-202ENST00000440504 555 ntTSL 4 BASIC1.47□□□□□ -2.17
CCDC112Q8NEF3 MTCO2P25-201ENST00000447065 681 ntBASIC1.47□□□□□ -2.17
CCDC112Q8NEF3 ZNF886P-201ENST00000450781 723 ntBASIC1.47□□□□□ -2.17
CCDC112Q8NEF3 LINC01077-201ENST00000452288 413 ntTSL 3 BASIC1.47□□□□□ -2.17
CCDC112Q8NEF3 MEMO1P3-201ENST00000459811 302 ntBASIC1.47□□□□□ -2.17
CCDC112Q8NEF3 AC018437.1-201ENST00000492214 406 ntBASIC1.47□□□□□ -2.17
CCDC112Q8NEF3 LINC02514-201ENST00000509058 498 ntTSL 3 BASIC1.47□□□□□ -2.17
CCDC112Q8NEF3 AC112198.4-201ENST00000515450 351 ntBASIC1.47□□□□□ -2.17
CCDC112Q8NEF3 AC025871.1-202ENST00000518819 432 ntTSL 3 BASIC1.47□□□□□ -2.17
CCDC112Q8NEF3 AF117829.1-204ENST00000519854 284 ntTSL 3 BASIC1.47□□□□□ -2.17
CCDC112Q8NEF3 NARSP2-202ENST00000522022 349 ntTSL 3 BASIC1.47□□□□□ -2.17
CCDC112Q8NEF3 HMSD-204ENST00000526932 162 ntTSL 3 BASIC1.47□□□□□ -2.17
CCDC112Q8NEF3 AP003128.1-201ENST00000531414 448 ntTSL 2 BASIC1.47□□□□□ -2.17
CCDC112Q8NEF3 LINC02350-201ENST00000544419 480 ntTSL 3 BASIC1.47□□□□□ -2.17
CCDC112Q8NEF3 LINC00871-202ENST00000556071 554 ntTSL 3 BASIC1.47□□□□□ -2.17
CCDC112Q8NEF3 AC015720.1-201ENST00000565251 277 ntBASIC1.47□□□□□ -2.17
CCDC112Q8NEF3 AL356432.3-201ENST00000568952 465 ntBASIC1.47□□□□□ -2.17
CCDC112Q8NEF3 AC012146.1-204ENST00000570712 426 ntTSL 3 BASIC1.47□□□□□ -2.17
CCDC112Q8NEF3 AC091057.3-201ENST00000602684 733 ntBASIC1.47□□□□□ -2.17
CCDC112Q8NEF3 AL645939.4-201ENST00000604495 135 ntBASIC1.47□□□□□ -2.17
CCDC112Q8NEF3 SCOC-AS1-203ENST00000609616 405 ntTSL 3 BASIC1.47□□□□□ -2.17
CCDC112Q8NEF3 AC084824.5-201ENST00000612009 413 ntBASIC1.47□□□□□ -2.17
CCDC112Q8NEF3 AC123767.1-202ENST00000620407 817 ntBASIC1.47□□□□□ -2.17
CCDC112Q8NEF3 AP000676.3-201ENST00000623299 569 ntBASIC1.47□□□□□ -2.17
CCDC112Q8NEF3 AL161722.3-201ENST00000605789 2983 ntBASIC1.46□□□□□ -2.18
CCDC112Q8NEF3 LIPJ-201ENST00000371939 1484 ntAPPRIS P1 TSL 1 (best) BASIC1.46□□□□□ -2.18
CCDC112Q8NEF3 MTND5P33-201ENST00000571250 1450 ntBASIC1.46□□□□□ -2.18
CCDC112Q8NEF3 RNU4-13P-201ENST00000364019 141 ntBASIC1.46□□□□□ -2.18
CCDC112Q8NEF3 RNU6-621P-201ENST00000364752 109 ntBASIC1.46□□□□□ -2.18
CCDC112Q8NEF3 Y_RNA.327-201ENST00000365201 102 ntBASIC1.46□□□□□ -2.18
CCDC112Q8NEF3 RNU6-338P-201ENST00000383888 105 ntBASIC1.46□□□□□ -2.18
CCDC112Q8NEF3 MIR561-201ENST00000385216 97 ntBASIC1.46□□□□□ -2.18
CCDC112Q8NEF3 AL359634.1-202ENST00000404721 284 ntBASIC1.46□□□□□ -2.18
CCDC112Q8NEF3 AL360091.2-201ENST00000446847 650 ntTSL 5 BASIC1.46□□□□□ -2.18
CCDC112Q8NEF3 AL160287.1-201ENST00000455612 432 ntTSL 3 BASIC1.46□□□□□ -2.18
CCDC112Q8NEF3 AL157400.4-201ENST00000455699 667 ntTSL 1 (best) BASIC1.46□□□□□ -2.18
CCDC112Q8NEF3 AL354824.2-201ENST00000458004 446 ntTSL 3 BASIC1.46□□□□□ -2.18
CCDC112Q8NEF3 AC117503.1-201ENST00000472241 394 ntBASIC1.46□□□□□ -2.18
CCDC112Q8NEF3 AC011005.2-201ENST00000487324 359 ntBASIC1.46□□□□□ -2.18
CCDC112Q8NEF3 AC093895.1-203ENST00000506814 591 ntTSL 5 BASIC1.46□□□□□ -2.18
CCDC112Q8NEF3 HTN3-205ENST00000530128 775 ntAPPRIS P2 TSL 2 BASIC1.46□□□□□ -2.18
CCDC112Q8NEF3 LINC02384-205ENST00000539404 785 ntTSL 3 BASIC1.46□□□□□ -2.18
CCDC112Q8NEF3 NDUFA5P6-201ENST00000542110 379 ntBASIC1.46□□□□□ -2.18
CCDC112Q8NEF3 AC018554.1-202ENST00000565133 444 ntTSL 3 BASIC1.46□□□□□ -2.18
CCDC112Q8NEF3 AC002558.3-201ENST00000574021 401 ntTSL 3 BASIC1.46□□□□□ -2.18
CCDC112Q8NEF3 AC012213.3-201ENST00000577199 777 ntBASIC1.46□□□□□ -2.18
CCDC112Q8NEF3 BNIP3P26-201ENST00000600827 554 ntBASIC1.46□□□□□ -2.18
CCDC112Q8NEF3 AL391597.2-201ENST00000635698 479 ntTSL 5 BASIC1.46□□□□□ -2.18
Retrieved 100 of 98,524 protein–RNA pairs in 110.6 ms