Protein–RNA interactions for Protein: Q8NCR9

CLRN3, Clarin-3, humanhuman

Predictions only

Length 226 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLRN3Q8NCR9 AC105758.1-201ENST00000506038 399 ntBASIC3.44□□□□□ -1.86
CLRN3Q8NCR9 AC026784.1-201ENST00000507986 352 ntBASIC3.44□□□□□ -1.86
CLRN3Q8NCR9 RNU7-175P-201ENST00000515915 61 ntBASIC3.44□□□□□ -1.86
CLRN3Q8NCR9 RNU6-475P-201ENST00000516073 104 ntBASIC3.44□□□□□ -1.86
CLRN3Q8NCR9 MIR5699-201ENST00000578903 90 ntBASIC3.44□□□□□ -1.86
CLRN3Q8NCR9 RPS15AP11-201ENST00000594193 385 ntBASIC3.44□□□□□ -1.86
CLRN3Q8NCR9 RMST_8.1-201ENST00000610287 165 ntBASIC3.44□□□□□ -1.86
CLRN3Q8NCR9 SMAD5-AS1_4.1-201ENST00000615561 167 ntBASIC3.44□□□□□ -1.86
CLRN3Q8NCR9 AL138828.1-201ENST00000626414 291 ntTSL 5 BASIC3.44□□□□□ -1.86
CLRN3Q8NCR9 SCARNA4-201ENST00000629045 128 ntBASIC3.44□□□□□ -1.86
CLRN3Q8NCR9 RUVBL2-214ENST00000640699 153 ntTSL 5 BASIC3.44□□□□□ -1.86
CLRN3Q8NCR9 ZNF594-201ENST00000399604 4862 ntAPPRIS P1 BASIC3.44□□□□□ -1.86
CLRN3Q8NCR9 GABRG2-210ENST00000638772 7669 ntTSL 5 BASIC3.44□□□□□ -1.86
CLRN3Q8NCR9 POLR2B-203ENST00000431623 3666 ntTSL 2 BASIC3.44□□□□□ -1.86
CLRN3Q8NCR9 CFHR4-202ENST00000367416 2178 ntAPPRIS P1 TSL 2 BASIC3.44□□□□□ -1.86
CLRN3Q8NCR9 WNK3-202ENST00000375159 5403 ntAPPRIS P3 TSL 1 (best) BASIC3.43□□□□□ -1.86
CLRN3Q8NCR9 AL353743.1-202ENST00000431724 1695 ntBASIC3.43□□□□□ -1.86
CLRN3Q8NCR9 TCEANC-201ENST00000380600 2988 ntAPPRIS P1 TSL 3 BASIC3.43□□□□□ -1.86
CLRN3Q8NCR9 RAPGEF6-202ENST00000308008 4176 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
CLRN3Q8NCR9 MS4A14-202ENST00000395001 3401 ntTSL 5 BASIC3.43□□□□□ -1.86
CLRN3Q8NCR9 SLC6A15-203ENST00000450363 4229 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
CLRN3Q8NCR9 CCDC66-201ENST00000326595 3027 ntAPPRIS P3 TSL 1 (best) BASIC3.43□□□□□ -1.86
CLRN3Q8NCR9 UBE2W-203ENST00000517608 8426 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
CLRN3Q8NCR9 PKHD1L1-201ENST00000378402 13076 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
CLRN3Q8NCR9 RNF180-202ENST00000389100 4906 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
CLRN3Q8NCR9 RNU6-1010P-201ENST00000362757 107 ntBASIC3.43□□□□□ -1.86
CLRN3Q8NCR9 Y_RNA.145-201ENST00000363527 102 ntBASIC3.43□□□□□ -1.86
CLRN3Q8NCR9 RFX3-203ENST00000381984 364 ntTSL 3 BASIC3.43□□□□□ -1.86
CLRN3Q8NCR9 RNU6-1027P-201ENST00000383998 107 ntBASIC3.43□□□□□ -1.86
CLRN3Q8NCR9 MIR184-201ENST00000384962 84 ntBASIC3.43□□□□□ -1.86
CLRN3Q8NCR9 PVALB-202ENST00000404171 422 ntTSL 2 BASIC3.43□□□□□ -1.86
CLRN3Q8NCR9 AL391361.1-201ENST00000405580 489 ntBASIC3.43□□□□□ -1.86
CLRN3Q8NCR9 RNU2-23P-201ENST00000410545 195 ntBASIC3.43□□□□□ -1.86
CLRN3Q8NCR9 ERI3-IT1-201ENST00000414156 619 ntTSL 3 BASIC3.43□□□□□ -1.86
CLRN3Q8NCR9 RBMY1KP-201ENST00000423480 476 ntBASIC3.43□□□□□ -1.86
CLRN3Q8NCR9 MRPS18CP6-201ENST00000423587 223 ntBASIC3.43□□□□□ -1.86
CLRN3Q8NCR9 AC092423.1-201ENST00000430165 186 ntBASIC3.43□□□□□ -1.86
CLRN3Q8NCR9 AL161621.1-201ENST00000444796 340 ntTSL 3 BASIC3.43□□□□□ -1.86
CLRN3Q8NCR9 AL161629.1-201ENST00000446201 457 ntTSL 3 BASIC3.43□□□□□ -1.86
CLRN3Q8NCR9 AL138767.2-201ENST00000446794 168 ntTSL 3 BASIC3.43□□□□□ -1.86
CLRN3Q8NCR9 AC073850.1-201ENST00000449243 255 ntBASIC3.43□□□□□ -1.86
CLRN3Q8NCR9 AL353705.4-201ENST00000449661 238 ntBASIC3.43□□□□□ -1.86
CLRN3Q8NCR9 AC079168.2-201ENST00000453977 416 ntBASIC3.43□□□□□ -1.86
CLRN3Q8NCR9 RPL30P12-201ENST00000474666 353 ntBASIC3.43□□□□□ -1.86
CLRN3Q8NCR9 AC015911.1-201ENST00000495111 156 ntBASIC3.43□□□□□ -1.86
CLRN3Q8NCR9 AC093663.1-201ENST00000497190 394 ntBASIC3.43□□□□□ -1.86
CLRN3Q8NCR9 AL139193.1-201ENST00000554967 539 ntTSL 4 BASIC3.43□□□□□ -1.86
CLRN3Q8NCR9 CHEK2P2-203ENST00000566448 670 ntTSL 5 BASIC3.43□□□□□ -1.86
CLRN3Q8NCR9 AC090457.1-201ENST00000579775 211 ntTSL 3 BASIC3.43□□□□□ -1.86
CLRN3Q8NCR9 B3GNTL1P2-201ENST00000603673 288 ntBASIC3.43□□□□□ -1.86
CLRN3Q8NCR9 AC006077.1-201ENST00000604746 343 ntBASIC3.43□□□□□ -1.86
CLRN3Q8NCR9 AC100812.1-201ENST00000607622 580 ntBASIC3.43□□□□□ -1.86
CLRN3Q8NCR9 AC137590.2-201ENST00000619709 240 ntBASIC3.43□□□□□ -1.86
CLRN3Q8NCR9 CR392039.5-201ENST00000623201 510 ntBASIC3.43□□□□□ -1.86
CLRN3Q8NCR9 SNAP23-223ENST00000627440 210 ntTSL 5 BASIC3.43□□□□□ -1.86
CLRN3Q8NCR9 AL606534.2-204ENST00000635008 178 ntBASIC3.43□□□□□ -1.86
CLRN3Q8NCR9 AC110079.1-202ENST00000635213 138 ntBASIC3.43□□□□□ -1.86
CLRN3Q8NCR9 OR8K3-203ENST00000641662 2438 ntAPPRIS P1 BASIC3.43□□□□□ -1.86
CLRN3Q8NCR9 ATF2-204ENST00000409437 3697 ntTSL 5 BASIC3.43□□□□□ -1.86
CLRN3Q8NCR9 PALMD-205ENST00000615664 1844 ntTSL 5 BASIC3.42□□□□□ -1.86
CLRN3Q8NCR9 GEN1-201ENST00000317402 9854 ntAPPRIS P1 TSL 2 BASIC3.42□□□□□ -1.86
CLRN3Q8NCR9 KNTC1-201ENST00000333479 6975 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
CLRN3Q8NCR9 KIF21A-203ENST00000541463 4866 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
CLRN3Q8NCR9 AC005592.1-201ENST00000566527 1640 ntBASIC3.42□□□□□ -1.86
CLRN3Q8NCR9 SNORD114-19-201ENST00000363072 75 ntBASIC3.42□□□□□ -1.86
CLRN3Q8NCR9 SNORA63C-201ENST00000364578 129 ntBASIC3.42□□□□□ -1.86
CLRN3Q8NCR9 Y_RNA.504-201ENST00000384481 104 ntBASIC3.42□□□□□ -1.86
CLRN3Q8NCR9 RNU1-82P-201ENST00000390851 165 ntBASIC3.42□□□□□ -1.86
CLRN3Q8NCR9 DDX39BP1-205ENST00000422507 192 ntBASIC3.42□□□□□ -1.86
CLRN3Q8NCR9 AL358453.1-201ENST00000422522 250 ntBASIC3.42□□□□□ -1.86
CLRN3Q8NCR9 AL358075.3-201ENST00000426289 226 ntBASIC3.42□□□□□ -1.86
CLRN3Q8NCR9 AC244670.1-201ENST00000436879 112 ntBASIC3.42□□□□□ -1.86
CLRN3Q8NCR9 AC004383.1-201ENST00000438135 289 ntBASIC3.42□□□□□ -1.86
CLRN3Q8NCR9 GPM6BP3-201ENST00000442797 145 ntBASIC3.42□□□□□ -1.86
CLRN3Q8NCR9 RPS23P1-201ENST00000491662 432 ntBASIC3.42□□□□□ -1.86
CLRN3Q8NCR9 RPL31P61-201ENST00000496160 376 ntBASIC3.42□□□□□ -1.86
CLRN3Q8NCR9 SNRPCP2-201ENST00000504370 475 ntBASIC3.42□□□□□ -1.86
CLRN3Q8NCR9 OR7H2P-201ENST00000513483 306 ntBASIC3.42□□□□□ -1.86
CLRN3Q8NCR9 RNU1-6P-201ENST00000516290 144 ntBASIC3.42□□□□□ -1.86
CLRN3Q8NCR9 Y_RNA.706-201ENST00000516933 99 ntBASIC3.42□□□□□ -1.86
CLRN3Q8NCR9 AC109329.1-201ENST00000518744 317 ntBASIC3.42□□□□□ -1.86
CLRN3Q8NCR9 AC091144.1-201ENST00000519573 138 ntBASIC3.42□□□□□ -1.86
CLRN3Q8NCR9 AC093331.1-201ENST00000521474 169 ntBASIC3.42□□□□□ -1.86
CLRN3Q8NCR9 AC068789.1-201ENST00000547942 577 ntTSL 2 BASIC3.42□□□□□ -1.86
CLRN3Q8NCR9 AC012254.1-201ENST00000592747 200 ntTSL 3 BASIC3.42□□□□□ -1.86
CLRN3Q8NCR9 AC008739.1-201ENST00000598137 575 ntTSL 2 BASIC3.42□□□□□ -1.86
CLRN3Q8NCR9 BPIFA4P-203ENST00000603168 689 ntBASIC3.42□□□□□ -1.86
CLRN3Q8NCR9 AC024940.4-201ENST00000605507 246 ntBASIC3.42□□□□□ -1.86
CLRN3Q8NCR9 AC109309.2-201ENST00000612597 332 ntBASIC3.42□□□□□ -1.86
CLRN3Q8NCR9 MIR6826-201ENST00000617808 98 ntBASIC3.42□□□□□ -1.86
CLRN3Q8NCR9 KIAA1524-208ENST00000625495 147 ntTSL 5 BASIC3.42□□□□□ -1.86
CLRN3Q8NCR9 C5orf42-205ENST00000508244 11062 ntAPPRIS P2 TSL 5 BASIC3.42□□□□□ -1.86
CLRN3Q8NCR9 PSG1-205ENST00000595124 1692 ntTSL 2 BASIC3.42□□□□□ -1.86
CLRN3Q8NCR9 SNX16-212ENST00000615066 1918 ntTSL 5 BASIC3.42□□□□□ -1.86
CLRN3Q8NCR9 AC103988.1-201ENST00000566382 2177 ntBASIC3.42□□□□□ -1.86
CLRN3Q8NCR9 C12orf4-201ENST00000261250 3826 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
CLRN3Q8NCR9 AC073073.2-201ENST00000609827 2578 ntBASIC3.42□□□□□ -1.86
CLRN3Q8NCR9 AK9-203ENST00000368948 2478 ntTSL 5 BASIC3.42□□□□□ -1.86
CLRN3Q8NCR9 IQCG-205ENST00000455191 1981 ntAPPRIS P1 TSL 2 BASIC3.42□□□□□ -1.86
CLRN3Q8NCR9 C2orf78-201ENST00000409561 3045 ntAPPRIS P1 TSL 2 BASIC3.41□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 150.5 ms