Protein–RNA interactions for Protein: Q8N9Z2

CCDC71L, Coiled-coil domain-containing protein 71L, humanhuman

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC71LQ8N9Z2 MGST1-207ENST00000535309 1331 ntTSL 1 (best) BASIC2.09□□□□□ -2.08
CCDC71LQ8N9Z2 OFD1P6Y-202ENST00000451061 2724 ntBASIC2.09□□□□□ -2.08
CCDC71LQ8N9Z2 USP53-202ENST00000450251 6072 ntAPPRIS P1 TSL 5 BASIC2.09□□□□□ -2.08
CCDC71LQ8N9Z2 CKAP2P1-201ENST00000555477 2049 ntBASIC2.08□□□□□ -2.08
CCDC71LQ8N9Z2 CCSAP-202ENST00000366686 4399 ntTSL 2 BASIC2.08□□□□□ -2.08
CCDC71LQ8N9Z2 AC108750.1-201ENST00000637986 2706 ntAPPRIS P1 TSL 4 BASIC2.08□□□□□ -2.08
CCDC71LQ8N9Z2 SPAG11A-202ENST00000326625 445 ntTSL 5 BASIC2.08□□□□□ -2.08
CCDC71LQ8N9Z2 IL36B-202ENST00000327407 1052 ntAPPRIS P1 TSL 1 (best) BASIC2.08□□□□□ -2.08
CCDC71LQ8N9Z2 SNORD62.1-201ENST00000362541 86 ntBASIC2.08□□□□□ -2.08
CCDC71LQ8N9Z2 RNU6-525P-201ENST00000363685 104 ntBASIC2.08□□□□□ -2.08
CCDC71LQ8N9Z2 SNORD114-30-201ENST00000364448 72 ntBASIC2.08□□□□□ -2.08
CCDC71LQ8N9Z2 RN7SKP226-201ENST00000364912 300 ntBASIC2.08□□□□□ -2.08
CCDC71LQ8N9Z2 SNORA41-201ENST00000384675 132 ntBASIC2.08□□□□□ -2.08
CCDC71LQ8N9Z2 Y_RNA.576-201ENST00000384781 102 ntBASIC2.08□□□□□ -2.08
CCDC71LQ8N9Z2 U3.26-201ENST00000391236 204 ntBASIC2.08□□□□□ -2.08
CCDC71LQ8N9Z2 RNU2-66P-201ENST00000410650 161 ntBASIC2.08□□□□□ -2.08
CCDC71LQ8N9Z2 AP000473.1-201ENST00000413645 550 ntTSL 3 BASIC2.08□□□□□ -2.08
CCDC71LQ8N9Z2 AC104462.1-201ENST00000414565 447 ntTSL 2 BASIC2.08□□□□□ -2.08
CCDC71LQ8N9Z2 AC096649.2-201ENST00000416186 393 ntBASIC2.08□□□□□ -2.08
CCDC71LQ8N9Z2 MAMDC2-AS1-203ENST00000420573 339 ntTSL 3 BASIC2.08□□□□□ -2.08
CCDC71LQ8N9Z2 AC006333.1-201ENST00000422401 410 ntTSL 3 BASIC2.08□□□□□ -2.08
CCDC71LQ8N9Z2 LINC00368-201ENST00000422994 650 ntTSL 1 (best) BASIC2.08□□□□□ -2.08
CCDC71LQ8N9Z2 AC241644.2-201ENST00000426504 480 ntTSL 3 BASIC2.08□□□□□ -2.08
CCDC71LQ8N9Z2 AL589823.1-201ENST00000429577 183 ntBASIC2.08□□□□□ -2.08
CCDC71LQ8N9Z2 AC073464.1-201ENST00000429823 534 ntBASIC2.08□□□□□ -2.08
CCDC71LQ8N9Z2 Z98742.2-201ENST00000431564 187 ntBASIC2.08□□□□□ -2.08
CCDC71LQ8N9Z2 LINC00844-201ENST00000432535 477 ntTSL 2 BASIC2.08□□□□□ -2.08
CCDC71LQ8N9Z2 GACAT1-202ENST00000441383 540 ntTSL 4 BASIC2.08□□□□□ -2.08
CCDC71LQ8N9Z2 IPO7P1-201ENST00000442031 636 ntBASIC2.08□□□□□ -2.08
CCDC71LQ8N9Z2 OSTCP8-201ENST00000445117 448 ntBASIC2.08□□□□□ -2.08
CCDC71LQ8N9Z2 MTCO2P7-201ENST00000446518 666 ntBASIC2.08□□□□□ -2.08
CCDC71LQ8N9Z2 AC073326.1-201ENST00000451832 557 ntTSL 3 BASIC2.08□□□□□ -2.08
CCDC71LQ8N9Z2 FAM92A1P2-202ENST00000504766 877 ntBASIC2.08□□□□□ -2.08
CCDC71LQ8N9Z2 AC005920.2-201ENST00000509833 332 ntTSL 3 BASIC2.08□□□□□ -2.08
CCDC71LQ8N9Z2 SNORA25.11-201ENST00000515935 105 ntBASIC2.08□□□□□ -2.08
CCDC71LQ8N9Z2 RNU6-1315P-201ENST00000517187 99 ntBASIC2.08□□□□□ -2.08
CCDC71LQ8N9Z2 LINC02165-201ENST00000563061 443 ntTSL 3 BASIC2.08□□□□□ -2.08
CCDC71LQ8N9Z2 CYCSP39-201ENST00000565821 309 ntBASIC2.08□□□□□ -2.08
CCDC71LQ8N9Z2 AGGF1P4-201ENST00000568249 801 ntBASIC2.08□□□□□ -2.08
CCDC71LQ8N9Z2 AC106782.4-201ENST00000568264 210 ntBASIC2.08□□□□□ -2.08
CCDC71LQ8N9Z2 MIR4782-201ENST00000577987 79 ntBASIC2.08□□□□□ -2.08
CCDC71LQ8N9Z2 AC005357.2-201ENST00000586473 583 ntTSL 2 BASIC2.08□□□□□ -2.08
CCDC71LQ8N9Z2 AC008521.1-201ENST00000587471 187 ntBASIC2.08□□□□□ -2.08
CCDC71LQ8N9Z2 AC004223.2-201ENST00000590309 544 ntBASIC2.08□□□□□ -2.08
CCDC71LQ8N9Z2 AC025449.1-201ENST00000603896 529 ntBASIC2.08□□□□□ -2.08
CCDC71LQ8N9Z2 AC091152.3-201ENST00000604227 325 ntBASIC2.08□□□□□ -2.08
CCDC71LQ8N9Z2 NDUFA8P1-201ENST00000605525 367 ntBASIC2.08□□□□□ -2.08
CCDC71LQ8N9Z2 YPEL5P2-201ENST00000605553 359 ntBASIC2.08□□□□□ -2.08
CCDC71LQ8N9Z2 AL137847.3-201ENST00000611521 109 ntBASIC2.08□□□□□ -2.08
CCDC71LQ8N9Z2 AC136475.10-201ENST00000620253 385 ntBASIC2.08□□□□□ -2.08
CCDC71LQ8N9Z2 U4.3-201ENST00000621047 82 ntBASIC2.08□□□□□ -2.08
CCDC71LQ8N9Z2 AC138649.3-201ENST00000622154 254 ntBASIC2.08□□□□□ -2.08
CCDC71LQ8N9Z2 AC024940.5-201ENST00000622889 474 ntBASIC2.08□□□□□ -2.08
CCDC71LQ8N9Z2 AC009161.2-201ENST00000624626 138 ntBASIC2.08□□□□□ -2.08
CCDC71LQ8N9Z2 AC080128.1-201ENST00000474389 1917 ntBASIC2.08□□□□□ -2.08
CCDC71LQ8N9Z2 TAB2-201ENST00000367456 4553 ntAPPRIS P1 TSL 5 BASIC2.08□□□□□ -2.08
CCDC71LQ8N9Z2 AL589740.1-207ENST00000607823 1962 ntTSL 5 BASIC2.08□□□□□ -2.08
CCDC71LQ8N9Z2 CENPE-201ENST00000265148 8612 ntAPPRIS P1 TSL 2 BASIC2.08□□□□□ -2.08
CCDC71LQ8N9Z2 NEDD4-205ENST00000506154 6751 ntTSL 1 (best) BASIC2.07□□□□□ -2.08
CCDC71LQ8N9Z2 ZNF470-202ENST00000391709 6601 ntAPPRIS P1 TSL 5 BASIC2.07□□□□□ -2.08
CCDC71LQ8N9Z2 AL596028.1-201ENST00000326971 197 ntBASIC2.07□□□□□ -2.08
CCDC71LQ8N9Z2 MIRLET7G-201ENST00000362280 84 ntBASIC2.07□□□□□ -2.08
CCDC71LQ8N9Z2 RNA5SP456-201ENST00000364002 114 ntBASIC2.07□□□□□ -2.08
CCDC71LQ8N9Z2 RNU1-112P-201ENST00000364401 164 ntBASIC2.07□□□□□ -2.08
CCDC71LQ8N9Z2 SNORA18.3-201ENST00000384122 132 ntBASIC2.07□□□□□ -2.08
CCDC71LQ8N9Z2 MIR491-201ENST00000384877 84 ntBASIC2.07□□□□□ -2.08
CCDC71LQ8N9Z2 AL139039.1-201ENST00000401900 692 ntBASIC2.07□□□□□ -2.08
CCDC71LQ8N9Z2 AL133475.1-201ENST00000404414 305 ntBASIC2.07□□□□□ -2.08
CCDC71LQ8N9Z2 CTNNA2-204ENST00000409266 432 ntTSL 3 BASIC2.07□□□□□ -2.08
CCDC71LQ8N9Z2 RNU2-16P-201ENST00000410712 136 ntBASIC2.07□□□□□ -2.08
CCDC71LQ8N9Z2 AL160275.3-201ENST00000423876 471 ntBASIC2.07□□□□□ -2.08
CCDC71LQ8N9Z2 LINC01817-201ENST00000429317 564 ntTSL 4 BASIC2.07□□□□□ -2.08
CCDC71LQ8N9Z2 VN1R108P-201ENST00000431580 830 ntBASIC2.07□□□□□ -2.08
CCDC71LQ8N9Z2 AC018495.1-201ENST00000440266 452 ntTSL 3 BASIC2.07□□□□□ -2.08
CCDC71LQ8N9Z2 MIR4435-2HG-213ENST00000451884 423 ntTSL 3 BASIC2.07□□□□□ -2.08
CCDC71LQ8N9Z2 RPS29P15-201ENST00000458329 171 ntBASIC2.07□□□□□ -2.08
CCDC71LQ8N9Z2 AC079382.1-201ENST00000493346 557 ntBASIC2.07□□□□□ -2.08
CCDC71LQ8N9Z2 AC020703.1-201ENST00000505051 521 ntTSL 3 BASIC2.07□□□□□ -2.08
CCDC71LQ8N9Z2 SUB1-206ENST00000506237 908 ntAPPRIS P1 TSL 2 BASIC2.07□□□□□ -2.08
CCDC71LQ8N9Z2 AC110767.1-201ENST00000508374 239 ntTSL 3 BASIC2.07□□□□□ -2.08
CCDC71LQ8N9Z2 AC104806.1-201ENST00000508720 308 ntBASIC2.07□□□□□ -2.08
CCDC71LQ8N9Z2 HIGD1AP13-201ENST00000509878 289 ntBASIC2.07□□□□□ -2.08
CCDC71LQ8N9Z2 RNA5SP341-201ENST00000516261 117 ntBASIC2.07□□□□□ -2.08
CCDC71LQ8N9Z2 AC022039.1-201ENST00000527110 488 ntTSL 2 BASIC2.07□□□□□ -2.08
CCDC71LQ8N9Z2 AP003072.2-201ENST00000527756 676 ntBASIC2.07□□□□□ -2.08
CCDC71LQ8N9Z2 FAM92A1P1-201ENST00000528023 890 ntBASIC2.07□□□□□ -2.08
CCDC71LQ8N9Z2 RANP3-201ENST00000530970 276 ntBASIC2.07□□□□□ -2.08
CCDC71LQ8N9Z2 NTS-203ENST00000551529 801 ntTSL 3 BASIC2.07□□□□□ -2.08
CCDC71LQ8N9Z2 AL157871.3-201ENST00000557231 293 ntBASIC2.07□□□□□ -2.08
CCDC71LQ8N9Z2 AC007948.1-201ENST00000581632 242 ntTSL 5 BASIC2.07□□□□□ -2.08
CCDC71LQ8N9Z2 MIR3199-1-201ENST00000582434 88 ntBASIC2.07□□□□□ -2.08
CCDC71LQ8N9Z2 AC096708.3-201ENST00000584226 559 ntTSL 2 BASIC2.07□□□□□ -2.08
CCDC71LQ8N9Z2 AL391813.1-201ENST00000603098 260 ntBASIC2.07□□□□□ -2.08
CCDC71LQ8N9Z2 AC008536.2-201ENST00000607284 349 ntBASIC2.07□□□□□ -2.08
CCDC71LQ8N9Z2 AC007684.1-201ENST00000609671 477 ntBASIC2.07□□□□□ -2.08
CCDC71LQ8N9Z2 C8orf59-207ENST00000611854 563 ntAPPRIS P1 TSL 2 BASIC2.07□□□□□ -2.08
CCDC71LQ8N9Z2 ATP5A1P2-202ENST00000616464 443 ntBASIC2.07□□□□□ -2.08
CCDC71LQ8N9Z2 CCDC30-201ENST00000340612 2664 ntAPPRIS P2 TSL 5 BASIC2.07□□□□□ -2.08
CCDC71LQ8N9Z2 AC103710.2-202ENST00000641454 2853 ntBASIC2.07□□□□□ -2.08
CCDC71LQ8N9Z2 AC004944.1-201ENST00000517807 3059 ntBASIC2.06□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 125.2 ms