Protein–RNA interactions for Protein: Q8N5R6

CCDC33, Coiled-coil domain-containing protein 33, humanhuman

Predictions only

Length 958 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC33Q8N5R6 KBTBD3-207ENST00000534815 3396 ntTSL 5 BASIC3.45□□□□□ -1.86
CCDC33Q8N5R6 ESF1-202ENST00000617257 1470 ntTSL 5 BASIC3.45□□□□□ -1.86
CCDC33Q8N5R6 SYCP2-201ENST00000357552 5567 ntAPPRIS P2 TSL 1 (best) BASIC3.45□□□□□ -1.86
CCDC33Q8N5R6 PTBP2-211ENST00000609116 12014 ntAPPRIS ALT1 TSL 1 (best) BASIC3.45□□□□□ -1.86
CCDC33Q8N5R6 FAP-201ENST00000188790 2780 ntAPPRIS P2 TSL 1 (best) BASIC3.45□□□□□ -1.86
CCDC33Q8N5R6 AC093908.1-201ENST00000623125 8092 ntBASIC3.45□□□□□ -1.86
CCDC33Q8N5R6 PHF6-201ENST00000332070 4759 ntAPPRIS P2 TSL 1 (best) BASIC3.44□□□□□ -1.86
CCDC33Q8N5R6 MARCH7-202ENST00000409175 2402 ntAPPRIS P1 TSL 2 BASIC3.44□□□□□ -1.86
CCDC33Q8N5R6 AC007496.3-201ENST00000624987 3443 ntBASIC3.44□□□□□ -1.86
CCDC33Q8N5R6 PPIP5K2-203ENST00000414217 5842 ntAPPRIS P3 TSL 1 (best) BASIC3.44□□□□□ -1.86
CCDC33Q8N5R6 NUDT12-201ENST00000230792 3492 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
CCDC33Q8N5R6 SNX10-209ENST00000619420 2361 ntAPPRIS ALT1 TSL 5 BASIC3.44□□□□□ -1.86
CCDC33Q8N5R6 C5orf46-201ENST00000318315 506 ntAPPRIS P2 TSL 1 (best) BASIC3.44□□□□□ -1.86
CCDC33Q8N5R6 Y_RNA.160-201ENST00000363677 92 ntBASIC3.44□□□□□ -1.86
CCDC33Q8N5R6 Y_RNA.279-201ENST00000364763 95 ntBASIC3.44□□□□□ -1.86
CCDC33Q8N5R6 Y_RNA.303-201ENST00000364998 94 ntBASIC3.44□□□□□ -1.86
CCDC33Q8N5R6 RNY3P14-201ENST00000384309 102 ntBASIC3.44□□□□□ -1.86
CCDC33Q8N5R6 AL357075.1-201ENST00000404107 726 ntBASIC3.44□□□□□ -1.86
CCDC33Q8N5R6 MORN2-203ENST00000409131 544 ntTSL 5 BASIC3.44□□□□□ -1.86
CCDC33Q8N5R6 AC245291.1-201ENST00000419501 328 ntBASIC3.44□□□□□ -1.86
CCDC33Q8N5R6 AL365496.1-201ENST00000426885 215 ntBASIC3.44□□□□□ -1.86
CCDC33Q8N5R6 AL024508.1-201ENST00000432477 505 ntTSL 2 BASIC3.44□□□□□ -1.86
CCDC33Q8N5R6 HMGN2P10-201ENST00000448085 265 ntBASIC3.44□□□□□ -1.86
CCDC33Q8N5R6 HMGN1P18-201ENST00000457642 277 ntBASIC3.44□□□□□ -1.86
CCDC33Q8N5R6 AC087884.1-201ENST00000469738 328 ntBASIC3.44□□□□□ -1.86
CCDC33Q8N5R6 AC117503.1-201ENST00000472241 394 ntBASIC3.44□□□□□ -1.86
CCDC33Q8N5R6 AC006483.1-201ENST00000487308 313 ntBASIC3.44□□□□□ -1.86
CCDC33Q8N5R6 AC083904.1-201ENST00000487828 231 ntBASIC3.44□□□□□ -1.86
CCDC33Q8N5R6 AC093523.1-201ENST00000503268 499 ntTSL 3 BASIC3.44□□□□□ -1.86
CCDC33Q8N5R6 AC010486.1-201ENST00000511793 424 ntBASIC3.44□□□□□ -1.86
CCDC33Q8N5R6 RNU6-1069P-201ENST00000516612 133 ntBASIC3.44□□□□□ -1.86
CCDC33Q8N5R6 AC022634.1-201ENST00000520765 532 ntBASIC3.44□□□□□ -1.86
CCDC33Q8N5R6 AC011611.2-201ENST00000549888 358 ntTSL 3 BASIC3.44□□□□□ -1.86
CCDC33Q8N5R6 LINC02309-201ENST00000553679 207 ntTSL 3 BASIC3.44□□□□□ -1.86
CCDC33Q8N5R6 PSMA3P-201ENST00000555485 635 ntBASIC3.44□□□□□ -1.86
CCDC33Q8N5R6 PSMA4-205ENST00000558281 773 ntTSL 3 BASIC3.44□□□□□ -1.86
CCDC33Q8N5R6 AC092120.1-201ENST00000562211 420 ntTSL 3 BASIC3.44□□□□□ -1.86
CCDC33Q8N5R6 CTHRC1P1-201ENST00000605383 469 ntBASIC3.44□□□□□ -1.86
CCDC33Q8N5R6 AC087045.1-201ENST00000605856 382 ntBASIC3.44□□□□□ -1.86
CCDC33Q8N5R6 AC135507.2-201ENST00000612443 309 ntBASIC3.44□□□□□ -1.86
CCDC33Q8N5R6 AC004852.3-201ENST00000614131 326 ntBASIC3.44□□□□□ -1.86
CCDC33Q8N5R6 AL161629.2-201ENST00000615347 275 ntBASIC3.44□□□□□ -1.86
CCDC33Q8N5R6 ZNF804A-202ENST00000613975 3986 ntTSL 5 BASIC3.44□□□□□ -1.86
CCDC33Q8N5R6 LINC01419-201ENST00000522365 1521 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
CCDC33Q8N5R6 HTR2B-201ENST00000258400 2246 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
CCDC33Q8N5R6 MYOT-208ENST00000515645 1578 ntTSL 2 BASIC3.43□□□□□ -1.86
CCDC33Q8N5R6 KNL1-202ENST00000399668 7607 ntAPPRIS ALT2 TSL 1 (best) BASIC3.43□□□□□ -1.86
CCDC33Q8N5R6 CDC27P3-201ENST00000635418 1910 ntBASIC3.43□□□□□ -1.86
CCDC33Q8N5R6 RNA5SP383-201ENST00000362934 120 ntBASIC3.43□□□□□ -1.86
CCDC33Q8N5R6 Y_RNA.324-201ENST00000365165 102 ntBASIC3.43□□□□□ -1.86
CCDC33Q8N5R6 Y_RNA.373-201ENST00000365600 103 ntBASIC3.43□□□□□ -1.86
CCDC33Q8N5R6 ELF3-AS1-201ENST00000415582 500 ntTSL 2 BASIC3.43□□□□□ -1.86
CCDC33Q8N5R6 RPL21P111-201ENST00000418453 477 ntBASIC3.43□□□□□ -1.86
CCDC33Q8N5R6 AL513185.2-201ENST00000425543 193 ntBASIC3.43□□□□□ -1.86
CCDC33Q8N5R6 LINC01162-201ENST00000447262 447 ntTSL 5 BASIC3.43□□□□□ -1.86
CCDC33Q8N5R6 SNORA19.2-201ENST00000516013 114 ntBASIC3.43□□□□□ -1.86
CCDC33Q8N5R6 BTF3P12-201ENST00000519620 469 ntBASIC3.43□□□□□ -1.86
CCDC33Q8N5R6 AC090136.1-201ENST00000520009 240 ntBASIC3.43□□□□□ -1.86
CCDC33Q8N5R6 AC104237.1-201ENST00000527443 539 ntTSL 4 BASIC3.43□□□□□ -1.86
CCDC33Q8N5R6 APAF1-207ENST00000547743 651 ntTSL 3 BASIC3.43□□□□□ -1.86
CCDC33Q8N5R6 LINC00933-203ENST00000559812 219 ntBASIC3.43□□□□□ -1.86
CCDC33Q8N5R6 AL451007.1-201ENST00000595491 289 ntBASIC3.43□□□□□ -1.86
CCDC33Q8N5R6 DAOA-AS1_2.1-201ENST00000614829 187 ntBASIC3.43□□□□□ -1.86
CCDC33Q8N5R6 OR6C1-202ENST00000642104 2055 ntAPPRIS P1 BASIC3.43□□□□□ -1.86
CCDC33Q8N5R6 ZBED5-201ENST00000413761 2512 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
CCDC33Q8N5R6 VPS13C-203ENST00000395896 14579 ntAPPRIS ALT2 TSL 1 (best) BASIC3.43□□□□□ -1.86
CCDC33Q8N5R6 KIAA1841-211ENST00000612149 4202 ntTSL 5 BASIC3.43□□□□□ -1.86
CCDC33Q8N5R6 LRRC39-201ENST00000342895 1881 ntAPPRIS P1 TSL 5 BASIC3.43□□□□□ -1.86
CCDC33Q8N5R6 BCLAF1P1-201ENST00000505813 2752 ntBASIC3.42□□□□□ -1.86
CCDC33Q8N5R6 MBNL3-204ENST00000370853 2661 ntAPPRIS P4 TSL 1 (best) BASIC3.42□□□□□ -1.86
CCDC33Q8N5R6 ZNF676-201ENST00000397121 2944 ntAPPRIS P1 TSL 2 BASIC3.42□□□□□ -1.86
CCDC33Q8N5R6 ELF1-201ENST00000239882 3566 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
CCDC33Q8N5R6 MIR34A-201ENST00000385130 110 ntBASIC3.42□□□□□ -1.86
CCDC33Q8N5R6 AC023141.4-201ENST00000412031 328 ntBASIC3.42□□□□□ -1.86
CCDC33Q8N5R6 RPS15AP5-201ENST00000436276 388 ntBASIC3.42□□□□□ -1.86
CCDC33Q8N5R6 AC092573.2-202ENST00000437243 336 ntTSL 3 BASIC3.42□□□□□ -1.86
CCDC33Q8N5R6 AL359771.1-201ENST00000441809 379 ntTSL 5 BASIC3.42□□□□□ -1.86
CCDC33Q8N5R6 AP000936.1-201ENST00000442124 483 ntTSL 5 BASIC3.42□□□□□ -1.86
CCDC33Q8N5R6 AC098799.2-201ENST00000509466 868 ntBASIC3.42□□□□□ -1.86
CCDC33Q8N5R6 AC025465.4-201ENST00000513422 638 ntBASIC3.42□□□□□ -1.86
CCDC33Q8N5R6 SNORA64.4-201ENST00000516632 81 ntBASIC3.42□□□□□ -1.86
CCDC33Q8N5R6 AC104027.1-201ENST00000521887 300 ntBASIC3.42□□□□□ -1.86
CCDC33Q8N5R6 AP002992.1-202ENST00000530842 551 ntTSL 2 BASIC3.42□□□□□ -1.86
CCDC33Q8N5R6 OR56A5-202ENST00000532411 942 ntAPPRIS P1 BASIC3.42□□□□□ -1.86
CCDC33Q8N5R6 AP001783.1-202ENST00000534620 408 ntTSL 2 BASIC3.42□□□□□ -1.86
CCDC33Q8N5R6 AC087463.1-201ENST00000568541 556 ntTSL 2 BASIC3.42□□□□□ -1.86
CCDC33Q8N5R6 AC080078.1-201ENST00000603643 410 ntTSL 3 BASIC3.42□□□□□ -1.86
CCDC33Q8N5R6 AC021646.1-201ENST00000605469 484 ntBASIC3.42□□□□□ -1.86
CCDC33Q8N5R6 HOTAIRM1_5.1-201ENST00000619311 145 ntBASIC3.42□□□□□ -1.86
CCDC33Q8N5R6 OR4C15-202ENST00000642128 951 ntAPPRIS P1 BASIC3.42□□□□□ -1.86
CCDC33Q8N5R6 MUC7-202ENST00000413702 2540 ntAPPRIS P2 TSL 4 BASIC3.42□□□□□ -1.86
CCDC33Q8N5R6 PLOD2-204ENST00000461497 3043 ntTSL 2 BASIC3.42□□□□□ -1.86
CCDC33Q8N5R6 PHTF2-202ENST00000275575 4541 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
CCDC33Q8N5R6 HERC5-203ENST00000508159 2243 ntTSL 2 BASIC3.42□□□□□ -1.86
CCDC33Q8N5R6 NEB-204ENST00000409198 20637 ntAPPRIS P3 TSL 5 BASIC3.41□□□□□ -1.86
CCDC33Q8N5R6 ZNF626-204ENST00000612591 4404 ntAPPRIS P1 TSL 5 BASIC3.41□□□□□ -1.86
CCDC33Q8N5R6 TFEC-203ENST00000393485 2704 ntTSL 2 BASIC3.41□□□□□ -1.86
CCDC33Q8N5R6 MFSD8-233ENST00000641482 4860 ntBASIC3.41□□□□□ -1.86
CCDC33Q8N5R6 ARHGAP12-201ENST00000311380 4625 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
CCDC33Q8N5R6 RNU6-72P-201ENST00000384285 79 ntBASIC3.41□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 132.9 ms