Protein–RNA interactions for Protein: Q8IVU3

HERC6, Probable E3 ubiquitin-protein ligase HERC6, humanhuman

Predictions only

Length 1,022 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HERC6Q8IVU3 LINC01928-201ENST00000591029 504 ntTSL 3 BASIC3.27□□□□□ -1.89
HERC6Q8IVU3 AL133393.1-201ENST00000603277 287 ntBASIC3.27□□□□□ -1.89
HERC6Q8IVU3 AL355877.2-201ENST00000603670 358 ntBASIC3.27□□□□□ -1.89
HERC6Q8IVU3 AL035413.2-201ENST00000604801 525 ntBASIC3.27□□□□□ -1.89
HERC6Q8IVU3 AC079610.3-201ENST00000606960 147 ntTSL 3 BASIC3.27□□□□□ -1.89
HERC6Q8IVU3 MIR663AHG-231ENST00000609044 590 ntTSL 5 BASIC3.27□□□□□ -1.89
HERC6Q8IVU3 AC090517.2-201ENST00000614966 680 ntBASIC3.27□□□□□ -1.89
HERC6Q8IVU3 AC099654.7-201ENST00000635788 2127 ntBASIC3.27□□□□□ -1.89
HERC6Q8IVU3 AP3S1-209ENST00000640413 489 ntTSL 5 BASIC3.27□□□□□ -1.89
HERC6Q8IVU3 HDX-201ENST00000297977 6200 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
HERC6Q8IVU3 OR13G1-202ENST00000642119 2568 ntAPPRIS P1 BASIC3.27□□□□□ -1.89
HERC6Q8IVU3 MME-216ENST00000615825 5523 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
HERC6Q8IVU3 ANKRD36BP1-202ENST00000604892 1417 ntBASIC3.27□□□□□ -1.89
HERC6Q8IVU3 PSG8-202ENST00000401467 1686 ntTSL 5 BASIC3.27□□□□□ -1.89
HERC6Q8IVU3 PHF3-202ENST00000393387 6947 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
HERC6Q8IVU3 ARHGAP28-204ENST00000419673 5492 ntAPPRIS P2 TSL 1 (best) BASIC3.26□□□□□ -1.89
HERC6Q8IVU3 THNSL1-201ENST00000376356 3691 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
HERC6Q8IVU3 OGN-202ENST00000375561 2743 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
HERC6Q8IVU3 DEFB107A-201ENST00000335021 389 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
HERC6Q8IVU3 DEFB107B-201ENST00000355602 389 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
HERC6Q8IVU3 RNY4P14-201ENST00000363656 96 ntBASIC3.26□□□□□ -1.89
HERC6Q8IVU3 RNU6-715P-201ENST00000365204 103 ntBASIC3.26□□□□□ -1.89
HERC6Q8IVU3 Y_RNA.623-201ENST00000411128 95 ntBASIC3.26□□□□□ -1.89
HERC6Q8IVU3 AL365277.2-201ENST00000415255 551 ntTSL 3 BASIC3.26□□□□□ -1.89
HERC6Q8IVU3 U51244.1-201ENST00000423120 374 ntTSL 3 BASIC3.26□□□□□ -1.89
HERC6Q8IVU3 MTCO1P20-201ENST00000425366 358 ntBASIC3.26□□□□□ -1.89
HERC6Q8IVU3 AC063976.3-201ENST00000426849 329 ntBASIC3.26□□□□□ -1.89
HERC6Q8IVU3 AL603839.2-201ENST00000437060 546 ntTSL 5 BASIC3.26□□□□□ -1.89
HERC6Q8IVU3 MTATP6P13-201ENST00000438531 667 ntBASIC3.26□□□□□ -1.89
HERC6Q8IVU3 AC009969.1-201ENST00000438726 172 ntBASIC3.26□□□□□ -1.89
HERC6Q8IVU3 CACYBPP2-201ENST00000453625 678 ntBASIC3.26□□□□□ -1.89
HERC6Q8IVU3 AC022493.1-201ENST00000492984 337 ntBASIC3.26□□□□□ -1.89
HERC6Q8IVU3 AC091885.1-201ENST00000506658 268 ntBASIC3.26□□□□□ -1.89
HERC6Q8IVU3 AC074344.1-201ENST00000512823 224 ntBASIC3.26□□□□□ -1.89
HERC6Q8IVU3 Y_RNA.704-201ENST00000516851 102 ntBASIC3.26□□□□□ -1.89
HERC6Q8IVU3 SNORD60.2-201ENST00000516883 86 ntBASIC3.26□□□□□ -1.89
HERC6Q8IVU3 AC011257.1-201ENST00000519048 281 ntTSL 3 BASIC3.26□□□□□ -1.89
HERC6Q8IVU3 SPINK7-205ENST00000523535 299 ntTSL 2 BASIC3.26□□□□□ -1.89
HERC6Q8IVU3 AC090124.2-201ENST00000527727 563 ntTSL 4 BASIC3.26□□□□□ -1.89
HERC6Q8IVU3 AC090607.4-201ENST00000558192 369 ntTSL 3 BASIC3.26□□□□□ -1.89
HERC6Q8IVU3 AC234778.2-201ENST00000566241 354 ntBASIC3.26□□□□□ -1.89
HERC6Q8IVU3 AC015908.4-201ENST00000582334 575 ntTSL 4 BASIC3.26□□□□□ -1.89
HERC6Q8IVU3 LINC01900-203ENST00000585185 393 ntTSL 3 BASIC3.26□□□□□ -1.89
HERC6Q8IVU3 DISC2.1-201ENST00000612827 205 ntBASIC3.26□□□□□ -1.89
HERC6Q8IVU3 uc_338.34-201ENST00000617467 174 ntBASIC3.26□□□□□ -1.89
HERC6Q8IVU3 AC105265.4-201ENST00000618391 306 ntTSL 5 BASIC3.26□□□□□ -1.89
HERC6Q8IVU3 ZBED5-201ENST00000413761 2512 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
HERC6Q8IVU3 AL365440.2-201ENST00000419738 2597 ntTSL 2 BASIC3.25□□□□□ -1.89
HERC6Q8IVU3 RBBP8-202ENST00000360790 2962 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
HERC6Q8IVU3 AP003122.5-201ENST00000527668 3766 ntBASIC3.25□□□□□ -1.89
HERC6Q8IVU3 HERC4-201ENST00000277817 4371 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
HERC6Q8IVU3 FRS2-201ENST00000397997 6550 ntAPPRIS P1 TSL 5 BASIC3.25□□□□□ -1.89
HERC6Q8IVU3 CCDC178-213ENST00000583930 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC3.25□□□□□ -1.89
HERC6Q8IVU3 ACTR6-212ENST00000552376 1659 ntTSL 5 BASIC3.25□□□□□ -1.89
HERC6Q8IVU3 SNORA18.3-201ENST00000384122 132 ntBASIC3.25□□□□□ -1.89
HERC6Q8IVU3 RNU6-851P-201ENST00000384565 107 ntBASIC3.25□□□□□ -1.89
HERC6Q8IVU3 MIR578-201ENST00000384828 96 ntBASIC3.25□□□□□ -1.89
HERC6Q8IVU3 SNORD70.1-201ENST00000391007 85 ntBASIC3.25□□□□□ -1.89
HERC6Q8IVU3 OFD1P1Y-201ENST00000411756 1225 ntBASIC3.25□□□□□ -1.89
HERC6Q8IVU3 AC096649.2-201ENST00000416186 393 ntBASIC3.25□□□□□ -1.89
HERC6Q8IVU3 ARL5AP1-201ENST00000418991 388 ntBASIC3.25□□□□□ -1.89
HERC6Q8IVU3 MYL8P-204ENST00000431574 518 ntBASIC3.25□□□□□ -1.89
HERC6Q8IVU3 UBE2V1P8-201ENST00000437166 265 ntBASIC3.25□□□□□ -1.89
HERC6Q8IVU3 HMGN2P10-201ENST00000448085 265 ntBASIC3.25□□□□□ -1.89
HERC6Q8IVU3 AC007879.3-202ENST00000448786 823 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
HERC6Q8IVU3 AC114501.3-201ENST00000453648 164 ntTSL 5 BASIC3.25□□□□□ -1.89
HERC6Q8IVU3 AL583843.1-201ENST00000456070 346 ntBASIC3.25□□□□□ -1.89
HERC6Q8IVU3 RPS29P12-201ENST00000460178 152 ntBASIC3.25□□□□□ -1.89
HERC6Q8IVU3 AC006483.1-201ENST00000487308 313 ntBASIC3.25□□□□□ -1.89
HERC6Q8IVU3 MTAPP1-201ENST00000489154 819 ntBASIC3.25□□□□□ -1.89
HERC6Q8IVU3 AC074124.1-201ENST00000502368 375 ntTSL 3 BASIC3.25□□□□□ -1.89
HERC6Q8IVU3 AC114781.4-201ENST00000513707 639 ntBASIC3.25□□□□□ -1.89
HERC6Q8IVU3 RNU4-29P-201ENST00000515943 174 ntBASIC3.25□□□□□ -1.89
HERC6Q8IVU3 AC104211.1-202ENST00000521307 866 ntTSL 3 BASIC3.25□□□□□ -1.89
HERC6Q8IVU3 AC007368.1-201ENST00000536422 974 ntTSL 5 BASIC3.25□□□□□ -1.89
HERC6Q8IVU3 MDM2-233ENST00000545204 398 ntTSL 5 BASIC3.25□□□□□ -1.89
HERC6Q8IVU3 AC021739.1-201ENST00000559631 174 ntBASIC3.25□□□□□ -1.89
HERC6Q8IVU3 CYCSP39-201ENST00000565821 309 ntBASIC3.25□□□□□ -1.89
HERC6Q8IVU3 AC011477.3-201ENST00000585571 403 ntTSL 5 BASIC3.25□□□□□ -1.89
HERC6Q8IVU3 AC087045.1-201ENST00000605856 382 ntBASIC3.25□□□□□ -1.89
HERC6Q8IVU3 YWHAEP7-203ENST00000622054 312 ntBASIC3.25□□□□□ -1.89
HERC6Q8IVU3 FAM214A-201ENST00000261844 4217 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
HERC6Q8IVU3 VSTM2A-OT1-201ENST00000456049 3031 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
HERC6Q8IVU3 Y_RNA.450-201ENST00000384198 113 ntBASIC3.24□□□□□ -1.89
HERC6Q8IVU3 Y_RNA.480-201ENST00000384364 102 ntBASIC3.24□□□□□ -1.89
HERC6Q8IVU3 RNU6-166P-201ENST00000384371 107 ntBASIC3.24□□□□□ -1.89
HERC6Q8IVU3 RNU6-780P-201ENST00000391030 104 ntBASIC3.24□□□□□ -1.89
HERC6Q8IVU3 MTND1P23-201ENST00000416931 372 ntBASIC3.24□□□□□ -1.89
HERC6Q8IVU3 AC007179.2-207ENST00000435557 556 ntTSL 4 BASIC3.24□□□□□ -1.89
HERC6Q8IVU3 AL353780.1-201ENST00000455583 458 ntTSL 2 BASIC3.24□□□□□ -1.89
HERC6Q8IVU3 AC005062.1-201ENST00000457921 566 ntTSL 3 BASIC3.24□□□□□ -1.89
HERC6Q8IVU3 AL121769.1-201ENST00000469473 401 ntBASIC3.24□□□□□ -1.89
HERC6Q8IVU3 RPS27P26-201ENST00000494583 239 ntBASIC3.24□□□□□ -1.89
HERC6Q8IVU3 AC009901.1-201ENST00000506703 541 ntBASIC3.24□□□□□ -1.89
HERC6Q8IVU3 SMAD1-AS2-201ENST00000508936 1090 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
HERC6Q8IVU3 RNU6-718P-201ENST00000516166 105 ntBASIC3.24□□□□□ -1.89
HERC6Q8IVU3 RNU6-835P-201ENST00000516974 104 ntBASIC3.24□□□□□ -1.89
HERC6Q8IVU3 AC068205.1-204ENST00000532989 481 ntTSL 3 BASIC3.24□□□□□ -1.89
HERC6Q8IVU3 CR383656.11-201ENST00000552261 498 ntTSL 3 BASIC3.24□□□□□ -1.89
HERC6Q8IVU3 AC091544.4-201ENST00000555268 342 ntBASIC3.24□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 81 ms