Protein–RNA interactions for Protein: Q8IV63

VRK3, Inactive serine/threonine-protein kinase VRK3, humanhuman

Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3Q8IV63 KIAA1107-203ENST00000637221 4337 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
VRK3Q8IV63 USP33-201ENST00000357428 4155 ntTSL 5 BASIC3.54□□□□□ -1.84
VRK3Q8IV63 MCF2-203ENST00000370576 3688 ntAPPRIS P3 TSL 1 (best) BASIC3.54□□□□□ -1.84
VRK3Q8IV63 WNK3-202ENST00000375159 5403 ntAPPRIS P3 TSL 1 (best) BASIC3.53□□□□□ -1.84
VRK3Q8IV63 FIGNL1-201ENST00000356889 3471 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
VRK3Q8IV63 SLITRK5-201ENST00000325089 21103 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
VRK3Q8IV63 LRFN5-204ENST00000554171 4253 ntAPPRIS ALT2 TSL 1 (best) BASIC3.53□□□□□ -1.84
VRK3Q8IV63 AK9-201ENST00000285397 2566 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
VRK3Q8IV63 RNF13-202ENST00000361785 1939 ntTSL 2 BASIC3.53□□□□□ -1.84
VRK3Q8IV63 Y_RNA.26-201ENST00000362539 101 ntBASIC3.53□□□□□ -1.84
VRK3Q8IV63 Y_RNA.60-201ENST00000362831 98 ntBASIC3.53□□□□□ -1.84
VRK3Q8IV63 RNY1P16-201ENST00000363063 111 ntBASIC3.53□□□□□ -1.84
VRK3Q8IV63 RNU6-770P-201ENST00000363929 105 ntBASIC3.53□□□□□ -1.84
VRK3Q8IV63 RNA5SP42-201ENST00000364278 115 ntBASIC3.53□□□□□ -1.84
VRK3Q8IV63 SNORA73.2-201ENST00000364946 201 ntBASIC3.53□□□□□ -1.84
VRK3Q8IV63 RNU6-76P-201ENST00000384060 104 ntBASIC3.53□□□□□ -1.84
VRK3Q8IV63 SNORA5A-201ENST00000384111 134 ntBASIC3.53□□□□□ -1.84
VRK3Q8IV63 SNORA70E-201ENST00000384492 135 ntBASIC3.53□□□□□ -1.84
VRK3Q8IV63 MIR554-201ENST00000384874 96 ntBASIC3.53□□□□□ -1.84
VRK3Q8IV63 RNU6-712P-201ENST00000410558 100 ntBASIC3.53□□□□□ -1.84
VRK3Q8IV63 ATP5A1P2-201ENST00000412323 255 ntBASIC3.53□□□□□ -1.84
VRK3Q8IV63 ELF3-AS1-201ENST00000415582 500 ntTSL 2 BASIC3.53□□□□□ -1.84
VRK3Q8IV63 AL023693.1-201ENST00000434255 216 ntTSL 5 BASIC3.53□□□□□ -1.84
VRK3Q8IV63 RPS3AP46-201ENST00000448352 682 ntBASIC3.53□□□□□ -1.84
VRK3Q8IV63 AC084357.1-201ENST00000473404 255 ntBASIC3.53□□□□□ -1.84
VRK3Q8IV63 AC018437.1-201ENST00000492214 406 ntBASIC3.53□□□□□ -1.84
VRK3Q8IV63 AP002833.1-201ENST00000530572 566 ntTSL 3 BASIC3.53□□□□□ -1.84
VRK3Q8IV63 AL512791.1-201ENST00000555853 300 ntTSL 3 BASIC3.53□□□□□ -1.84
VRK3Q8IV63 OR1M4P-201ENST00000589199 287 ntBASIC3.53□□□□□ -1.84
VRK3Q8IV63 AP005264.4-201ENST00000592203 422 ntTSL 5 BASIC3.53□□□□□ -1.84
VRK3Q8IV63 VN1R91P-201ENST00000594377 169 ntBASIC3.53□□□□□ -1.84
VRK3Q8IV63 RAC1P9-201ENST00000604990 392 ntBASIC3.53□□□□□ -1.84
VRK3Q8IV63 LINC00310-206ENST00000609947 892 ntTSL 5 BASIC3.53□□□□□ -1.84
VRK3Q8IV63 U7.8-201ENST00000619968 63 ntBASIC3.53□□□□□ -1.84
VRK3Q8IV63 LINC02246-205ENST00000627623 417 ntTSL 5 BASIC3.53□□□□□ -1.84
VRK3Q8IV63 RAD17-202ENST00000305138 3164 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
VRK3Q8IV63 YWHAZ-201ENST00000353245 2829 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
VRK3Q8IV63 OR9K2-202ENST00000641329 3120 ntAPPRIS P1 BASIC3.53□□□□□ -1.84
VRK3Q8IV63 MUC7-203ENST00000456088 2479 ntAPPRIS P2 TSL 4 BASIC3.53□□□□□ -1.84
VRK3Q8IV63 ADGRL2-211ENST00000370730 6173 ntTSL 5 BASIC3.53□□□□□ -1.84
VRK3Q8IV63 GPRC6A-201ENST00000310357 2860 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.85
VRK3Q8IV63 PPIP5K2-201ENST00000321521 15407 ntAPPRIS P3 TSL 5 BASIC3.53□□□□□ -1.85
VRK3Q8IV63 MGA-211ENST00000570161 11859 ntAPPRIS P4 TSL 5 BASIC3.52□□□□□ -1.85
VRK3Q8IV63 WDR72-201ENST00000360509 5887 ntAPPRIS P2 TSL 1 (best) BASIC3.52□□□□□ -1.85
VRK3Q8IV63 GPR34-201ENST00000378138 1815 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
VRK3Q8IV63 BIRC3-201ENST00000263464 5197 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
VRK3Q8IV63 Y_RNA.48-201ENST00000362710 103 ntBASIC3.52□□□□□ -1.85
VRK3Q8IV63 Y_RNA.478-201ENST00000384358 107 ntBASIC3.52□□□□□ -1.85
VRK3Q8IV63 Y_RNA.526-201ENST00000384572 110 ntBASIC3.52□□□□□ -1.85
VRK3Q8IV63 SNORD73A-201ENST00000386062 65 ntBASIC3.52□□□□□ -1.85
VRK3Q8IV63 RNU6-1093P-201ENST00000391194 107 ntBASIC3.52□□□□□ -1.85
VRK3Q8IV63 AL445529.1-201ENST00000398713 389 ntBASIC3.52□□□□□ -1.85
VRK3Q8IV63 RNU2-38P-201ENST00000410856 79 ntBASIC3.52□□□□□ -1.85
VRK3Q8IV63 RNU4-78P-201ENST00000410940 126 ntBASIC3.52□□□□□ -1.85
VRK3Q8IV63 AC017079.2-201ENST00000416102 485 ntBASIC3.52□□□□□ -1.85
VRK3Q8IV63 AC017083.1-201ENST00000428093 483 ntBASIC3.52□□□□□ -1.85
VRK3Q8IV63 AL353997.1-201ENST00000432936 108 ntBASIC3.52□□□□□ -1.85
VRK3Q8IV63 AL590399.6-201ENST00000446396 307 ntBASIC3.52□□□□□ -1.85
VRK3Q8IV63 AL133547.1-201ENST00000448546 220 ntBASIC3.52□□□□□ -1.85
VRK3Q8IV63 Z68323.1-201ENST00000450365 519 ntTSL 3 BASIC3.52□□□□□ -1.85
VRK3Q8IV63 MTCO3P8-201ENST00000453691 755 ntBASIC3.52□□□□□ -1.85
VRK3Q8IV63 ANP32BP2-201ENST00000454525 545 ntBASIC3.52□□□□□ -1.85
VRK3Q8IV63 HMGN1P11-201ENST00000508668 303 ntBASIC3.52□□□□□ -1.85
VRK3Q8IV63 AC104619.4-201ENST00000510773 249 ntBASIC3.52□□□□□ -1.85
VRK3Q8IV63 AC113155.1-201ENST00000511141 769 ntBASIC3.52□□□□□ -1.85
VRK3Q8IV63 NDUFB4P9-201ENST00000511646 388 ntBASIC3.52□□□□□ -1.85
VRK3Q8IV63 AC113167.1-201ENST00000512941 570 ntTSL 4 BASIC3.52□□□□□ -1.85
VRK3Q8IV63 AL133279.1-202ENST00000556789 456 ntTSL 5 BASIC3.52□□□□□ -1.85
VRK3Q8IV63 PWRN1-209ENST00000568019 359 ntTSL 3 BASIC3.52□□□□□ -1.85
VRK3Q8IV63 AC079070.1-201ENST00000578740 555 ntTSL 2 BASIC3.52□□□□□ -1.85
VRK3Q8IV63 AL512605.2-201ENST00000592972 256 ntBASIC3.52□□□□□ -1.85
VRK3Q8IV63 BDH2P1-201ENST00000602288 736 ntBASIC3.52□□□□□ -1.85
VRK3Q8IV63 AC098479.1-201ENST00000609225 154 ntBASIC3.52□□□□□ -1.85
VRK3Q8IV63 AC006023.2-201ENST00000609916 167 ntBASIC3.52□□□□□ -1.85
VRK3Q8IV63 RMST_4.1-201ENST00000616886 107 ntBASIC3.52□□□□□ -1.85
VRK3Q8IV63 U6.104-201ENST00000637979 90 ntBASIC3.52□□□□□ -1.85
VRK3Q8IV63 CAPZA2-215ENST00000639546 129 ntTSL 5 BASIC3.52□□□□□ -1.85
VRK3Q8IV63 SMC1B-201ENST00000357450 4201 ntAPPRIS P1 TSL 5 BASIC3.52□□□□□ -1.85
VRK3Q8IV63 EBAG9-210ENST00000620557 2186 ntAPPRIS P1 TSL 3 BASIC3.52□□□□□ -1.85
VRK3Q8IV63 ZNF72P-201ENST00000425869 1908 ntBASIC3.52□□□□□ -1.85
VRK3Q8IV63 YWHAZ-211ENST00000457309 3007 ntAPPRIS P1 TSL 2 BASIC3.52□□□□□ -1.85
VRK3Q8IV63 PGGT1B-203ENST00000419445 9545 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
VRK3Q8IV63 CYP3A7-201ENST00000336374 1971 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
VRK3Q8IV63 USP9Y-201ENST00000338981 10036 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
VRK3Q8IV63 C2orf78-201ENST00000409561 3045 ntAPPRIS P1 TSL 2 BASIC3.51□□□□□ -1.85
VRK3Q8IV63 TDRD1-202ENST00000369280 4062 ntAPPRIS ALT2 TSL 5 BASIC3.51□□□□□ -1.85
VRK3Q8IV63 Y_RNA.64-201ENST00000362845 102 ntBASIC3.51□□□□□ -1.85
VRK3Q8IV63 RNU6-1249P-201ENST00000363237 111 ntBASIC3.51□□□□□ -1.85
VRK3Q8IV63 RNU6-806P-201ENST00000365147 105 ntBASIC3.51□□□□□ -1.85
VRK3Q8IV63 U3.42-201ENST00000408746 214 ntBASIC3.51□□□□□ -1.85
VRK3Q8IV63 AC004870.4-201ENST00000424359 360 ntTSL 2 BASIC3.51□□□□□ -1.85
VRK3Q8IV63 GOT2P5-201ENST00000433995 546 ntBASIC3.51□□□□□ -1.85
VRK3Q8IV63 RPS3AP12-201ENST00000443616 753 ntBASIC3.51□□□□□ -1.85
VRK3Q8IV63 MTND4LP30-201ENST00000454092 297 ntBASIC3.51□□□□□ -1.85
VRK3Q8IV63 RPL39P38-201ENST00000467018 153 ntBASIC3.51□□□□□ -1.85
VRK3Q8IV63 FO393415.2-201ENST00000480085 343 ntBASIC3.51□□□□□ -1.85
VRK3Q8IV63 HMGB3P17-201ENST00000504195 649 ntBASIC3.51□□□□□ -1.85
VRK3Q8IV63 AC139718.1-201ENST00000508010 300 ntTSL 5 BASIC3.51□□□□□ -1.85
VRK3Q8IV63 AC025465.3-201ENST00000510570 311 ntBASIC3.51□□□□□ -1.85
VRK3Q8IV63 AC016553.1-201ENST00000513283 249 ntTSL 3 BASIC3.51□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 123.1 ms