Protein–RNA interactions for Protein: Q7Z3V4

UBE3B, Ubiquitin-protein ligase E3B, humanhuman

Predictions only

Length 1,068 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3BQ7Z3V4 LINC01564-201ENST00000448327 566 ntTSL 3 BASIC3.82□□□□□ -1.8
UBE3BQ7Z3V4 RNU7-152P-201ENST00000458982 64 ntBASIC3.82□□□□□ -1.8
UBE3BQ7Z3V4 RPL37P6-201ENST00000460682 294 ntBASIC3.82□□□□□ -1.8
UBE3BQ7Z3V4 RN7SL442P-201ENST00000473804 320 ntBASIC3.82□□□□□ -1.8
UBE3BQ7Z3V4 AC096736.2-201ENST00000507972 175 ntTSL 3 BASIC3.82□□□□□ -1.8
UBE3BQ7Z3V4 AC114316.1-201ENST00000511323 278 ntTSL 5 BASIC3.82□□□□□ -1.8
UBE3BQ7Z3V4 RNU4ATAC15P-201ENST00000516415 126 ntBASIC3.82□□□□□ -1.8
UBE3BQ7Z3V4 RNU6-914P-201ENST00000516749 109 ntBASIC3.82□□□□□ -1.8
UBE3BQ7Z3V4 RN7SKP272-201ENST00000516988 232 ntBASIC3.82□□□□□ -1.8
UBE3BQ7Z3V4 Y_RNA.718-201ENST00000517110 102 ntBASIC3.82□□□□□ -1.8
UBE3BQ7Z3V4 LINC02055-204ENST00000521034 432 ntTSL 5 BASIC3.82□□□□□ -1.8
UBE3BQ7Z3V4 COPS8P3-201ENST00000526024 482 ntBASIC3.82□□□□□ -1.8
UBE3BQ7Z3V4 AP005639.2-201ENST00000527592 928 ntBASIC3.82□□□□□ -1.8
UBE3BQ7Z3V4 CYCSP27-201ENST00000527643 293 ntBASIC3.82□□□□□ -1.8
UBE3BQ7Z3V4 SNRPGP16-201ENST00000533275 226 ntBASIC3.82□□□□□ -1.8
UBE3BQ7Z3V4 LINC02442-201ENST00000537732 343 ntTSL 3 BASIC3.82□□□□□ -1.8
UBE3BQ7Z3V4 IMMP1LP2-201ENST00000552954 492 ntBASIC3.82□□□□□ -1.8
UBE3BQ7Z3V4 AC093249.1-201ENST00000567049 203 ntBASIC3.82□□□□□ -1.8
UBE3BQ7Z3V4 MIR3921-201ENST00000577308 85 ntBASIC3.82□□□□□ -1.8
UBE3BQ7Z3V4 MIR3186-201ENST00000577404 85 ntBASIC3.82□□□□□ -1.8
UBE3BQ7Z3V4 LARP7P3-201ENST00000579888 337 ntBASIC3.82□□□□□ -1.8
UBE3BQ7Z3V4 MIR5692C1-201ENST00000585309 91 ntBASIC3.82□□□□□ -1.8
UBE3BQ7Z3V4 ATP1B3P1-201ENST00000605365 821 ntBASIC3.82□□□□□ -1.8
UBE3BQ7Z3V4 AC006023.2-201ENST00000609916 167 ntBASIC3.82□□□□□ -1.8
UBE3BQ7Z3V4 AL355810.1-201ENST00000614629 552 ntBASIC3.82□□□□□ -1.8
UBE3BQ7Z3V4 AP003481.1-201ENST00000637808 351 ntTSL 5 BASIC3.82□□□□□ -1.8
UBE3BQ7Z3V4 ZNF519P1-201ENST00000449011 1626 ntBASIC3.81□□□□□ -1.8
UBE3BQ7Z3V4 ABCG2-204ENST00000515655 4276 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
UBE3BQ7Z3V4 TMPRSS11A-202ENST00000508048 3247 ntAPPRIS ALT2 TSL 1 (best) BASIC3.81□□□□□ -1.8
UBE3BQ7Z3V4 EBAG9-210ENST00000620557 2186 ntAPPRIS P1 TSL 3 BASIC3.81□□□□□ -1.8
UBE3BQ7Z3V4 SNORD6-201ENST00000365444 73 ntBASIC3.81□□□□□ -1.8
UBE3BQ7Z3V4 SNORD42.2-201ENST00000365570 69 ntBASIC3.81□□□□□ -1.8
UBE3BQ7Z3V4 SNORD116-11-201ENST00000383882 92 ntBASIC3.81□□□□□ -1.8
UBE3BQ7Z3V4 MIR634-201ENST00000385208 97 ntBASIC3.81□□□□□ -1.8
UBE3BQ7Z3V4 TRAV34-201ENST00000390461 349 ntAPPRIS P1 BASIC3.81□□□□□ -1.8
UBE3BQ7Z3V4 MIR450B-201ENST00000401182 78 ntBASIC3.81□□□□□ -1.8
UBE3BQ7Z3V4 AL590004.1-201ENST00000405321 300 ntBASIC3.81□□□□□ -1.8
UBE3BQ7Z3V4 RNU2-71P-201ENST00000411395 189 ntBASIC3.81□□□□□ -1.8
UBE3BQ7Z3V4 AL139396.1-201ENST00000421137 167 ntBASIC3.81□□□□□ -1.8
UBE3BQ7Z3V4 COTL1P1-201ENST00000422309 375 ntBASIC3.81□□□□□ -1.8
UBE3BQ7Z3V4 FABP5P14-201ENST00000437273 393 ntBASIC3.81□□□□□ -1.8
UBE3BQ7Z3V4 RPS12P18-201ENST00000442381 270 ntBASIC3.81□□□□□ -1.8
UBE3BQ7Z3V4 RPL32P28-201ENST00000443577 397 ntBASIC3.81□□□□□ -1.8
UBE3BQ7Z3V4 AL353148.1-201ENST00000449761 463 ntTSL 2 BASIC3.81□□□□□ -1.8
UBE3BQ7Z3V4 RPL21P41-201ENST00000459863 264 ntBASIC3.81□□□□□ -1.8
UBE3BQ7Z3V4 AC117440.1-201ENST00000474107 571 ntBASIC3.81□□□□□ -1.8
UBE3BQ7Z3V4 RPS29P26-201ENST00000477483 171 ntBASIC3.81□□□□□ -1.8
UBE3BQ7Z3V4 AC096576.1-201ENST00000489014 359 ntBASIC3.81□□□□□ -1.8
UBE3BQ7Z3V4 AC009901.1-201ENST00000506703 541 ntBASIC3.81□□□□□ -1.8
UBE3BQ7Z3V4 HMGB3P15-201ENST00000507326 574 ntBASIC3.81□□□□□ -1.8
UBE3BQ7Z3V4 AC079160.1-201ENST00000513489 739 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
UBE3BQ7Z3V4 SCARNA15.2-201ENST00000516409 127 ntBASIC3.81□□□□□ -1.8
UBE3BQ7Z3V4 RNU6-273P-201ENST00000516937 96 ntBASIC3.81□□□□□ -1.8
UBE3BQ7Z3V4 RN7SKP289-201ENST00000517244 295 ntBASIC3.81□□□□□ -1.8
UBE3BQ7Z3V4 SKP1-203ENST00000517625 876 ntAPPRIS P4 TSL 3 BASIC3.81□□□□□ -1.8
UBE3BQ7Z3V4 AC104027.1-201ENST00000521887 300 ntBASIC3.81□□□□□ -1.8
UBE3BQ7Z3V4 PSMA4-205ENST00000558281 773 ntTSL 3 BASIC3.81□□□□□ -1.8
UBE3BQ7Z3V4 MED28P6-201ENST00000558776 231 ntBASIC3.81□□□□□ -1.8
UBE3BQ7Z3V4 H3F3AP1-201ENST00000559984 334 ntBASIC3.81□□□□□ -1.8
UBE3BQ7Z3V4 AC007151.1-201ENST00000572774 483 ntBASIC3.81□□□□□ -1.8
UBE3BQ7Z3V4 MIR4790-201ENST00000577799 79 ntBASIC3.81□□□□□ -1.8
UBE3BQ7Z3V4 AP001330.4-201ENST00000604350 154 ntBASIC3.81□□□□□ -1.8
UBE3BQ7Z3V4 AL359757.2-201ENST00000624309 274 ntBASIC3.81□□□□□ -1.8
UBE3BQ7Z3V4 TAB3-203ENST00000378930 6255 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
UBE3BQ7Z3V4 LINC00907-209ENST00000593234 3376 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
UBE3BQ7Z3V4 LINC01592-202ENST00000518540 2367 ntTSL 2 BASIC3.81□□□□□ -1.8
UBE3BQ7Z3V4 AC069228.1-201ENST00000546936 1615 ntTSL 3 BASIC3.81□□□□□ -1.8
UBE3BQ7Z3V4 BMP5-201ENST00000370830 3952 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
UBE3BQ7Z3V4 DAZ4-201ENST00000382296 2048 ntAPPRIS P5 TSL 5 BASIC3.8□□□□□ -1.8
UBE3BQ7Z3V4 RNU6-805P-201ENST00000365643 106 ntBASIC3.8□□□□□ -1.8
UBE3BQ7Z3V4 RNU6-43P-201ENST00000384302 107 ntBASIC3.8□□□□□ -1.8
UBE3BQ7Z3V4 RNU6-45P-201ENST00000384471 107 ntBASIC3.8□□□□□ -1.8
UBE3BQ7Z3V4 RNY4P36-201ENST00000391116 96 ntBASIC3.8□□□□□ -1.8
UBE3BQ7Z3V4 RPL37P10-201ENST00000412884 288 ntBASIC3.8□□□□□ -1.8
UBE3BQ7Z3V4 AL590783.1-201ENST00000424138 456 ntTSL 2 BASIC3.8□□□□□ -1.8
UBE3BQ7Z3V4 SKA2P1-201ENST00000425592 390 ntBASIC3.8□□□□□ -1.8
UBE3BQ7Z3V4 PLCE1-AS2-203ENST00000433038 396 ntTSL 2 BASIC3.8□□□□□ -1.8
UBE3BQ7Z3V4 HMGB1P12-201ENST00000438594 598 ntBASIC3.8□□□□□ -1.8
UBE3BQ7Z3V4 AC025750.2-201ENST00000442609 450 ntBASIC3.8□□□□□ -1.8
UBE3BQ7Z3V4 LINC01710-201ENST00000446002 390 ntTSL 5 BASIC3.8□□□□□ -1.8
UBE3BQ7Z3V4 Y_RNA.639-201ENST00000458981 102 ntBASIC3.8□□□□□ -1.8
UBE3BQ7Z3V4 AC079140.5-201ENST00000507882 310 ntBASIC3.8□□□□□ -1.8
UBE3BQ7Z3V4 AC008526.1-201ENST00000509149 338 ntBASIC3.8□□□□□ -1.8
UBE3BQ7Z3V4 RPL39P5-202ENST00000512505 151 ntBASIC3.8□□□□□ -1.8
UBE3BQ7Z3V4 AC100801.1-202ENST00000518266 371 ntTSL 3 BASIC3.8□□□□□ -1.8
UBE3BQ7Z3V4 MAL2-206ENST00000522187 547 ntTSL 4 BASIC3.8□□□□□ -1.8
UBE3BQ7Z3V4 AP003072.1-201ENST00000531740 145 ntBASIC3.8□□□□□ -1.8
UBE3BQ7Z3V4 LINC02350-201ENST00000544419 480 ntTSL 3 BASIC3.8□□□□□ -1.8
UBE3BQ7Z3V4 AC104002.1-201ENST00000557025 380 ntTSL 3 BASIC3.8□□□□□ -1.8
UBE3BQ7Z3V4 AL591516.1-201ENST00000611326 274 ntBASIC3.8□□□□□ -1.8
UBE3BQ7Z3V4 PROX1-AS1-244ENST00000630355 599 ntTSL 5 BASIC3.8□□□□□ -1.8
UBE3BQ7Z3V4 AC134503.1-201ENST00000633048 54 ntBASIC3.8□□□□□ -1.8
UBE3BQ7Z3V4 AL137790.1-201ENST00000634283 177 ntBASIC3.8□□□□□ -1.8
UBE3BQ7Z3V4 GABRG2-208ENST00000638552 3710 ntTSL 5 BASIC3.8□□□□□ -1.8
UBE3BQ7Z3V4 C1orf141-203ENST00000371007 2153 ntAPPRIS P3 TSL 5 BASIC3.8□□□□□ -1.8
UBE3BQ7Z3V4 LRMP-221ENST00000636465 4540 ntAPPRIS ALT2 TSL 5 BASIC3.8□□□□□ -1.8
UBE3BQ7Z3V4 LINC00836-202ENST00000626230 1640 ntTSL 2 BASIC3.8□□□□□ -1.8
UBE3BQ7Z3V4 CACNB4-222ENST00000636350 7654 ntTSL 5 BASIC3.8□□□□□ -1.8
UBE3BQ7Z3V4 DTHD1-202ENST00000456874 3365 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
UBE3BQ7Z3V4 OR4G2P-202ENST00000641004 1759 ntBASIC3.79□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 121.7 ms