Protein–RNA interactions for Protein: Q7Z3D4

LYSMD3, LysM and putative peptidoglycan-binding domain-containing protein 3, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD3Q7Z3D4 MIR3658-201ENST00000636291 56 ntBASIC4.76□□□□□ -1.65
LYSMD3Q7Z3D4 AP000542.2-201ENST00000623199 6179 ntBASIC4.76□□□□□ -1.65
LYSMD3Q7Z3D4 AC107068.1-201ENST00000563286 4218 ntBASIC4.76□□□□□ -1.65
LYSMD3Q7Z3D4 TLK1-212ENST00000521943 2605 ntTSL 2 BASIC4.76□□□□□ -1.65
LYSMD3Q7Z3D4 PLD1-203ENST00000356327 5855 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
LYSMD3Q7Z3D4 AC008568.2-201ENST00000623862 2313 ntBASIC4.75□□□□□ -1.65
LYSMD3Q7Z3D4 LYST-202ENST00000389794 12985 ntTSL 5 BASIC4.75□□□□□ -1.65
LYSMD3Q7Z3D4 LINC00276-202ENST00000418420 3503 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
LYSMD3Q7Z3D4 UBR1-201ENST00000290650 7761 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
LYSMD3Q7Z3D4 Y_RNA.101-201ENST00000363154 102 ntBASIC4.75□□□□□ -1.65
LYSMD3Q7Z3D4 RNU6-899P-201ENST00000363947 107 ntBASIC4.75□□□□□ -1.65
LYSMD3Q7Z3D4 TRAV7-201ENST00000390429 337 ntAPPRIS P1 BASIC4.75□□□□□ -1.65
LYSMD3Q7Z3D4 TRAJ40-201ENST00000390497 61 ntAPPRIS P1 BASIC4.75□□□□□ -1.65
LYSMD3Q7Z3D4 RPS16P5-201ENST00000406501 404 ntBASIC4.75□□□□□ -1.65
LYSMD3Q7Z3D4 CACYBP-203ENST00000406752 243 ntTSL 5 BASIC4.75□□□□□ -1.65
LYSMD3Q7Z3D4 Y_RNA.595-201ENST00000410403 105 ntBASIC4.75□□□□□ -1.65
LYSMD3Q7Z3D4 AL157709.1-201ENST00000412695 424 ntTSL 3 BASIC4.75□□□□□ -1.65
LYSMD3Q7Z3D4 BX510359.2-201ENST00000417920 305 ntBASIC4.75□□□□□ -1.65
LYSMD3Q7Z3D4 AC097662.1-205ENST00000433324 241 ntTSL 5 BASIC4.75□□□□□ -1.65
LYSMD3Q7Z3D4 AC074290.1-201ENST00000448883 135 ntBASIC4.75□□□□□ -1.65
LYSMD3Q7Z3D4 RN7SL481P-201ENST00000477764 299 ntBASIC4.75□□□□□ -1.65
LYSMD3Q7Z3D4 CYCTP-201ENST00000504253 315 ntBASIC4.75□□□□□ -1.65
LYSMD3Q7Z3D4 AC005699.1-205ENST00000510639 427 ntTSL 2 BASIC4.75□□□□□ -1.65
LYSMD3Q7Z3D4 IGHVIII-2-1-201ENST00000518843 291 ntBASIC4.75□□□□□ -1.65
LYSMD3Q7Z3D4 AC022915.1-201ENST00000521660 289 ntTSL 3 BASIC4.75□□□□□ -1.65
LYSMD3Q7Z3D4 AC024153.1-201ENST00000603103 365 ntBASIC4.75□□□□□ -1.65
LYSMD3Q7Z3D4 AL138963.2-201ENST00000605137 226 ntBASIC4.75□□□□□ -1.65
LYSMD3Q7Z3D4 MIR6853-201ENST00000619642 74 ntBASIC4.75□□□□□ -1.65
LYSMD3Q7Z3D4 MIR7641-1-201ENST00000627518 61 ntBASIC4.75□□□□□ -1.65
LYSMD3Q7Z3D4 SNORA43.4-201ENST00000629559 138 ntBASIC4.75□□□□□ -1.65
LYSMD3Q7Z3D4 CAPZA2-215ENST00000639546 129 ntTSL 5 BASIC4.75□□□□□ -1.65
LYSMD3Q7Z3D4 TLR8-201ENST00000218032 4216 ntAPPRIS ALT2 TSL 1 (best) BASIC4.75□□□□□ -1.65
LYSMD3Q7Z3D4 LMBRD1-201ENST00000370570 2099 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
LYSMD3Q7Z3D4 AC026951.1-201ENST00000559530 2459 ntBASIC4.75□□□□□ -1.65
LYSMD3Q7Z3D4 LINC01828-203ENST00000452716 3250 ntTSL 5 BASIC4.75□□□□□ -1.65
LYSMD3Q7Z3D4 SCAF11-212ENST00000549162 3934 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
LYSMD3Q7Z3D4 WDR72-202ENST00000396328 7507 ntAPPRIS P2 TSL 1 (best) BASIC4.75□□□□□ -1.65
LYSMD3Q7Z3D4 SPEF2-216ENST00000637569 7350 ntAPPRIS ALT2 TSL 5 BASIC4.75□□□□□ -1.65
LYSMD3Q7Z3D4 LANCL1-204ENST00000441020 4503 ntAPPRIS P1 TSL 5 BASIC4.74□□□□□ -1.65
LYSMD3Q7Z3D4 PIGN-210ENST00000588571 1960 ntTSL 5 BASIC4.74□□□□□ -1.65
LYSMD3Q7Z3D4 RNMT-209ENST00000592764 4108 ntTSL 2 BASIC4.74□□□□□ -1.65
LYSMD3Q7Z3D4 LINC02232-201ENST00000509932 4079 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
LYSMD3Q7Z3D4 NECAB1-202ENST00000521366 2908 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
LYSMD3Q7Z3D4 ANKRD30BP1-201ENST00000451052 2186 ntBASIC4.74□□□□□ -1.65
LYSMD3Q7Z3D4 ZBED5-201ENST00000413761 2512 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
LYSMD3Q7Z3D4 PCDH15-209ENST00000395433 6942 ntTSL 5 BASIC4.74□□□□□ -1.65
LYSMD3Q7Z3D4 FAR2-203ENST00000547116 1787 ntTSL 2 BASIC4.74□□□□□ -1.65
LYSMD3Q7Z3D4 RNU6-142P-201ENST00000384019 107 ntBASIC4.74□□□□□ -1.65
LYSMD3Q7Z3D4 Y_RNA.420-201ENST00000384043 110 ntBASIC4.74□□□□□ -1.65
LYSMD3Q7Z3D4 RNU6-381P-201ENST00000391259 108 ntBASIC4.74□□□□□ -1.65
LYSMD3Q7Z3D4 AL590762.2-201ENST00000395798 571 ntBASIC4.74□□□□□ -1.65
LYSMD3Q7Z3D4 AC138623.1-201ENST00000418060 216 ntBASIC4.74□□□□□ -1.65
LYSMD3Q7Z3D4 CYP4F29P-201ENST00000420685 446 ntBASIC4.74□□□□□ -1.65
LYSMD3Q7Z3D4 AC011753.3-201ENST00000443436 406 ntBASIC4.74□□□□□ -1.65
LYSMD3Q7Z3D4 AC073218.1-201ENST00000458413 171 ntTSL 5 BASIC4.74□□□□□ -1.65
LYSMD3Q7Z3D4 AC012081.1-201ENST00000462382 477 ntTSL 3 BASIC4.74□□□□□ -1.65
LYSMD3Q7Z3D4 AC004917.1-201ENST00000490856 575 ntTSL 4 BASIC4.74□□□□□ -1.65
LYSMD3Q7Z3D4 AC008852.1-201ENST00000510198 451 ntTSL 2 BASIC4.74□□□□□ -1.65
LYSMD3Q7Z3D4 AC100767.1-201ENST00000528178 123 ntBASIC4.74□□□□□ -1.65
LYSMD3Q7Z3D4 AC107016.1-201ENST00000550463 337 ntBASIC4.74□□□□□ -1.65
LYSMD3Q7Z3D4 DEFB117-201ENST00000602356 141 ntBASIC4.74□□□□□ -1.65
LYSMD3Q7Z3D4 MIR6780A-201ENST00000615089 68 ntBASIC4.74□□□□□ -1.65
LYSMD3Q7Z3D4 WDR7-201ENST00000254442 14083 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
LYSMD3Q7Z3D4 C2CD6-204ENST00000450242 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC4.74□□□□□ -1.65
LYSMD3Q7Z3D4 TFPI-201ENST00000233156 3885 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
LYSMD3Q7Z3D4 NBPF14-206ENST00000614999 10080 ntTSL 5 BASIC4.74□□□□□ -1.65
LYSMD3Q7Z3D4 AMY2B-201ENST00000361355 2181 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
LYSMD3Q7Z3D4 OR10D3-203ENST00000641546 3566 ntAPPRIS P1 BASIC4.74□□□□□ -1.65
LYSMD3Q7Z3D4 LTA4H-202ENST00000413268 1908 ntTSL 2 BASIC4.74□□□□□ -1.65
LYSMD3Q7Z3D4 BBX-203ENST00000402543 3980 ntTSL 5 BASIC4.73□□□□□ -1.65
LYSMD3Q7Z3D4 MTX3-203ENST00000512560 4799 ntTSL 2 BASIC4.73□□□□□ -1.65
LYSMD3Q7Z3D4 C4orf17-204ENST00000514652 2542 ntAPPRIS ALT2 TSL 5 BASIC4.73□□□□□ -1.65
LYSMD3Q7Z3D4 AL136164.3-201ENST00000624429 3978 ntBASIC4.73□□□□□ -1.65
LYSMD3Q7Z3D4 MMP16-201ENST00000286614 11558 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
LYSMD3Q7Z3D4 C15orf41-212ENST00000567389 2618 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
LYSMD3Q7Z3D4 AL365440.1-201ENST00000436135 2167 ntBASIC4.73□□□□□ -1.65
LYSMD3Q7Z3D4 AL590240.1-201ENST00000334118 313 ntBASIC4.73□□□□□ -1.65
LYSMD3Q7Z3D4 SNORD32A-201ENST00000364805 84 ntBASIC4.73□□□□□ -1.65
LYSMD3Q7Z3D4 RNU6-898P-201ENST00000365627 104 ntBASIC4.73□□□□□ -1.65
LYSMD3Q7Z3D4 U3.19-201ENST00000390893 196 ntBASIC4.73□□□□□ -1.65
LYSMD3Q7Z3D4 RNY4P18-201ENST00000391107 89 ntBASIC4.73□□□□□ -1.65
LYSMD3Q7Z3D4 MIR298-201ENST00000401212 88 ntBASIC4.73□□□□□ -1.65
LYSMD3Q7Z3D4 RNU2-68P-201ENST00000410878 191 ntBASIC4.73□□□□□ -1.65
LYSMD3Q7Z3D4 RNA5SP31-201ENST00000411144 127 ntBASIC4.73□□□□□ -1.65
LYSMD3Q7Z3D4 NHS-AS1-201ENST00000452788 366 ntTSL 3 BASIC4.73□□□□□ -1.65
LYSMD3Q7Z3D4 Y_RNA.637-201ENST00000459424 114 ntBASIC4.73□□□□□ -1.65
LYSMD3Q7Z3D4 RNU6-1198P-201ENST00000516904 67 ntBASIC4.73□□□□□ -1.65
LYSMD3Q7Z3D4 AC134698.5-201ENST00000519444 336 ntBASIC4.73□□□□□ -1.65
LYSMD3Q7Z3D4 AC002428.2-201ENST00000522973 414 ntTSL 3 BASIC4.73□□□□□ -1.65
LYSMD3Q7Z3D4 AC090138.1-201ENST00000524493 578 ntTSL 4 BASIC4.73□□□□□ -1.65
LYSMD3Q7Z3D4 AP003097.2-201ENST00000530126 178 ntTSL 3 BASIC4.73□□□□□ -1.65
LYSMD3Q7Z3D4 AC016256.1-201ENST00000547971 354 ntBASIC4.73□□□□□ -1.65
LYSMD3Q7Z3D4 LINC02327-203ENST00000550122 738 ntTSL 2 BASIC4.73□□□□□ -1.65
LYSMD3Q7Z3D4 DLD-214ENST00000639772 421 ntTSL 5 BASIC4.73□□□□□ -1.65
LYSMD3Q7Z3D4 AL359693.1-201ENST00000614959 2407 ntBASIC4.73□□□□□ -1.65
LYSMD3Q7Z3D4 SRP72P2-201ENST00000344851 1979 ntBASIC4.73□□□□□ -1.65
LYSMD3Q7Z3D4 MAP2-202ENST00000360351 9711 ntAPPRIS P2 TSL 5 BASIC4.72□□□□□ -1.65
LYSMD3Q7Z3D4 P2RY13-201ENST00000325602 2764 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
LYSMD3Q7Z3D4 SERPINI2-207ENST00000476257 1837 ntAPPRIS P1 TSL 5 BASIC4.72□□□□□ -1.65
LYSMD3Q7Z3D4 ZNF562-201ENST00000293648 12380 ntTSL 2 BASIC4.72□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 97.8 ms