Protein–RNA interactions for Protein: Q6ZV77

C9orf139, Uncharacterized protein C9orf139, humanhuman

Predictions only

Length 190 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf139Q6ZV77 AC096576.1-201ENST00000489014 359 ntBASIC2.79□□□□□ -1.96
C9orf139Q6ZV77 AC110794.1-201ENST00000505816 425 ntBASIC2.79□□□□□ -1.96
C9orf139Q6ZV77 AC103957.1-201ENST00000517681 503 ntTSL 3 BASIC2.79□□□□□ -1.96
C9orf139Q6ZV77 UTP23-205ENST00000520733 369 ntTSL 3 BASIC2.79□□□□□ -1.96
C9orf139Q6ZV77 MIR1273C-201ENST00000578669 77 ntBASIC2.79□□□□□ -1.96
C9orf139Q6ZV77 LRRC37A5P-203ENST00000580181 585 ntBASIC2.79□□□□□ -1.96
C9orf139Q6ZV77 AP005264.4-201ENST00000592203 422 ntTSL 5 BASIC2.79□□□□□ -1.96
C9orf139Q6ZV77 AC106900.2-201ENST00000604994 317 ntBASIC2.79□□□□□ -1.96
C9orf139Q6ZV77 AC080078.3-201ENST00000605407 463 ntBASIC2.79□□□□□ -1.96
C9orf139Q6ZV77 RNVU1-4-201ENST00000612985 164 ntBASIC2.79□□□□□ -1.96
C9orf139Q6ZV77 ATG5-207ENST00000613993 733 ntTSL 1 (best) BASIC2.79□□□□□ -1.96
C9orf139Q6ZV77 AC002076.2-201ENST00000617362 122 ntBASIC2.79□□□□□ -1.96
C9orf139Q6ZV77 SNORD39.4-201ENST00000620099 78 ntBASIC2.79□□□□□ -1.96
C9orf139Q6ZV77 AL031601.2-202ENST00000622650 282 ntBASIC2.79□□□□□ -1.96
C9orf139Q6ZV77 AC134503.1-201ENST00000633048 54 ntBASIC2.79□□□□□ -1.96
C9orf139Q6ZV77 DAZ4-201ENST00000382296 2048 ntAPPRIS P5 TSL 5 BASIC2.79□□□□□ -1.96
C9orf139Q6ZV77 PMS1-215ENST00000447232 2576 ntTSL 2 BASIC2.79□□□□□ -1.96
C9orf139Q6ZV77 CHD9-213ENST00000564845 11504 ntAPPRIS P1 TSL 1 (best) BASIC2.79□□□□□ -1.96
C9orf139Q6ZV77 IL6ST-205ENST00000381294 2574 ntTSL 1 (best) BASIC2.78□□□□□ -1.96
C9orf139Q6ZV77 ATXN3-248ENST00000558190 26812 ntAPPRIS P1 TSL 1 (best) BASIC2.78□□□□□ -1.96
C9orf139Q6ZV77 HDX-202ENST00000373177 2924 ntAPPRIS P1 TSL 1 (best) BASIC2.78□□□□□ -1.96
C9orf139Q6ZV77 RNU6-283P-201ENST00000364788 107 ntBASIC2.78□□□□□ -1.96
C9orf139Q6ZV77 RNU6-128P-201ENST00000383976 107 ntBASIC2.78□□□□□ -1.96
C9orf139Q6ZV77 Y_RNA.480-201ENST00000384364 102 ntBASIC2.78□□□□□ -1.96
C9orf139Q6ZV77 Y_RNA.482-201ENST00000384377 111 ntBASIC2.78□□□□□ -1.96
C9orf139Q6ZV77 SNORA1.3-201ENST00000384676 136 ntBASIC2.78□□□□□ -1.96
C9orf139Q6ZV77 MTCYBP4-201ENST00000401524 249 ntBASIC2.78□□□□□ -1.96
C9orf139Q6ZV77 AL590004.1-201ENST00000405321 300 ntBASIC2.78□□□□□ -1.96
C9orf139Q6ZV77 RNU6-607P-201ENST00000411283 108 ntBASIC2.78□□□□□ -1.96
C9orf139Q6ZV77 AC023051.1-201ENST00000414098 876 ntTSL 5 BASIC2.78□□□□□ -1.96
C9orf139Q6ZV77 AL353621.1-201ENST00000418219 243 ntBASIC2.78□□□□□ -1.96
C9orf139Q6ZV77 YPEL5P1-201ENST00000419731 367 ntBASIC2.78□□□□□ -1.96
C9orf139Q6ZV77 UBE2E2-AS1-202ENST00000430018 499 ntTSL 2 BASIC2.78□□□□□ -1.96
C9orf139Q6ZV77 SNAP23P1-201ENST00000433229 246 ntBASIC2.78□□□□□ -1.96
C9orf139Q6ZV77 AF274573.2-201ENST00000437772 520 ntTSL 5 BASIC2.78□□□□□ -1.96
C9orf139Q6ZV77 CYCSP32-201ENST00000440548 321 ntBASIC2.78□□□□□ -1.96
C9orf139Q6ZV77 BRK1P2-201ENST00000442875 223 ntBASIC2.78□□□□□ -1.96
C9orf139Q6ZV77 LAMTOR5P1-201ENST00000444290 270 ntBASIC2.78□□□□□ -1.96
C9orf139Q6ZV77 NHS-AS1-201ENST00000452788 366 ntTSL 3 BASIC2.78□□□□□ -1.96
C9orf139Q6ZV77 FABP5P15-201ENST00000453566 214 ntBASIC2.78□□□□□ -1.96
C9orf139Q6ZV77 AC009468.2-201ENST00000457372 366 ntTSL 5 BASIC2.78□□□□□ -1.96
C9orf139Q6ZV77 AC130509.1-201ENST00000464158 433 ntBASIC2.78□□□□□ -1.96
C9orf139Q6ZV77 AC079140.5-201ENST00000507882 310 ntBASIC2.78□□□□□ -1.96
C9orf139Q6ZV77 AC131956.2-201ENST00000510922 512 ntTSL 3 BASIC2.78□□□□□ -1.96
C9orf139Q6ZV77 AC106744.2-202ENST00000515123 448 ntTSL 3 BASIC2.78□□□□□ -1.96
C9orf139Q6ZV77 RNU6-1170P-201ENST00000515974 106 ntBASIC2.78□□□□□ -1.96
C9orf139Q6ZV77 RNU1-86P-201ENST00000516108 154 ntBASIC2.78□□□□□ -1.96
C9orf139Q6ZV77 RNU1-107P-201ENST00000516617 154 ntBASIC2.78□□□□□ -1.96
C9orf139Q6ZV77 RNU6-143P-201ENST00000516942 93 ntBASIC2.78□□□□□ -1.96
C9orf139Q6ZV77 LINC02155-201ENST00000519215 407 ntTSL 5 BASIC2.78□□□□□ -1.96
C9orf139Q6ZV77 FAM92A-209ENST00000519679 538 ntTSL 4 BASIC2.78□□□□□ -1.96
C9orf139Q6ZV77 AP003122.3-201ENST00000526316 255 ntBASIC2.78□□□□□ -1.96
C9orf139Q6ZV77 AC084851.1-201ENST00000529105 249 ntBASIC2.78□□□□□ -1.96
C9orf139Q6ZV77 AC025423.5-201ENST00000550230 219 ntBASIC2.78□□□□□ -1.96
C9orf139Q6ZV77 AL157871.3-201ENST00000557231 293 ntBASIC2.78□□□□□ -1.96
C9orf139Q6ZV77 AC011933.3-201ENST00000578226 372 ntTSL 1 (best) BASIC2.78□□□□□ -1.96
C9orf139Q6ZV77 AC022035.1-201ENST00000579923 302 ntTSL 2 BASIC2.78□□□□□ -1.96
C9orf139Q6ZV77 AL683887.1-201ENST00000603401 287 ntTSL 3 BASIC2.78□□□□□ -1.96
C9orf139Q6ZV77 AD001527.1-201ENST00000604228 379 ntTSL 5 BASIC2.78□□□□□ -1.96
C9orf139Q6ZV77 AL080274.1-201ENST00000605565 220 ntBASIC2.78□□□□□ -1.96
C9orf139Q6ZV77 RNU6ATAC35P-201ENST00000609276 444 ntBASIC2.78□□□□□ -1.96
C9orf139Q6ZV77 AL138880.2-201ENST00000616214 239 ntBASIC2.78□□□□□ -1.96
C9orf139Q6ZV77 AC068831.7-201ENST00000616954 363 ntBASIC2.78□□□□□ -1.96
C9orf139Q6ZV77 MIR6076-201ENST00000617521 113 ntBASIC2.78□□□□□ -1.96
C9orf139Q6ZV77 USP12-203ENST00000620323 349 ntTSL 3 BASIC2.78□□□□□ -1.96
C9orf139Q6ZV77 AC104971.4-201ENST00000622763 249 ntTSL 5 BASIC2.78□□□□□ -1.96
C9orf139Q6ZV77 TFEC-201ENST00000265440 6628 ntTSL 1 (best) BASIC2.78□□□□□ -1.96
C9orf139Q6ZV77 DPP10-205ENST00000410059 6278 ntAPPRIS ALT2 TSL 1 (best) BASIC2.78□□□□□ -1.97
C9orf139Q6ZV77 LRRTM2-201ENST00000274711 6017 ntAPPRIS P1 TSL 1 (best) BASIC2.77□□□□□ -1.97
C9orf139Q6ZV77 AC110774.1-201ENST00000623567 2018 ntBASIC2.77□□□□□ -1.97
C9orf139Q6ZV77 SNORD3E-201ENST00000362899 217 ntBASIC2.77□□□□□ -1.97
C9orf139Q6ZV77 Y_RNA.128-201ENST00000363391 112 ntBASIC2.77□□□□□ -1.97
C9orf139Q6ZV77 Y_RNA.216-201ENST00000364205 93 ntBASIC2.77□□□□□ -1.97
C9orf139Q6ZV77 RNU6-601P-201ENST00000384540 107 ntBASIC2.77□□□□□ -1.97
C9orf139Q6ZV77 RNU6-1179P-201ENST00000384667 107 ntBASIC2.77□□□□□ -1.97
C9orf139Q6ZV77 RNU6-95P-201ENST00000384697 107 ntBASIC2.77□□□□□ -1.97
C9orf139Q6ZV77 MIR301A-201ENST00000385261 86 ntBASIC2.77□□□□□ -1.97
C9orf139Q6ZV77 MIR548P-201ENST00000408336 84 ntBASIC2.77□□□□□ -1.97
C9orf139Q6ZV77 NT5C3A-205ENST00000409467 1032 ntAPPRIS ALT1 TSL 5 BASIC2.77□□□□□ -1.97
C9orf139Q6ZV77 RNU6-954P-201ENST00000411355 107 ntBASIC2.77□□□□□ -1.97
C9orf139Q6ZV77 LINC01737-201ENST00000412647 403 ntTSL 1 (best) BASIC2.77□□□□□ -1.97
C9orf139Q6ZV77 AC003092.1-201ENST00000415536 639 ntTSL 3 BASIC2.77□□□□□ -1.97
C9orf139Q6ZV77 ELF3-AS1-201ENST00000415582 500 ntTSL 2 BASIC2.77□□□□□ -1.97
C9orf139Q6ZV77 LINC01349-201ENST00000416343 497 ntTSL 3 BASIC2.77□□□□□ -1.97
C9orf139Q6ZV77 AC010967.2-201ENST00000418451 333 ntTSL 2 BASIC2.77□□□□□ -1.97
C9orf139Q6ZV77 AC002075.2-201ENST00000425207 252 ntBASIC2.77□□□□□ -1.97
C9orf139Q6ZV77 AC007919.1-201ENST00000429380 217 ntBASIC2.77□□□□□ -1.97
C9orf139Q6ZV77 MYL8P-204ENST00000431574 518 ntBASIC2.77□□□□□ -1.97
C9orf139Q6ZV77 AL445490.2-201ENST00000440492 441 ntTSL 3 BASIC2.77□□□□□ -1.97
C9orf139Q6ZV77 AL359672.1-201ENST00000442302 409 ntBASIC2.77□□□□□ -1.97
C9orf139Q6ZV77 DCLRE1CP1-201ENST00000454630 470 ntBASIC2.77□□□□□ -1.97
C9orf139Q6ZV77 AL109763.1-201ENST00000455391 461 ntTSL 2 BASIC2.77□□□□□ -1.97
C9orf139Q6ZV77 MTCO3P10-201ENST00000455912 772 ntBASIC2.77□□□□□ -1.97
C9orf139Q6ZV77 RN7SL330P-201ENST00000469709 307 ntBASIC2.77□□□□□ -1.97
C9orf139Q6ZV77 HMGN1P10-201ENST00000474557 553 ntBASIC2.77□□□□□ -1.97
C9orf139Q6ZV77 AL160314.1-201ENST00000490836 438 ntBASIC2.77□□□□□ -1.97
C9orf139Q6ZV77 AC008716.1-201ENST00000511084 513 ntBASIC2.77□□□□□ -1.97
C9orf139Q6ZV77 AC092436.3-201ENST00000511788 257 ntBASIC2.77□□□□□ -1.97
C9orf139Q6ZV77 RNU6-1213P-201ENST00000517075 94 ntBASIC2.77□□□□□ -1.97
C9orf139Q6ZV77 AC136777.1-201ENST00000517765 369 ntTSL 4 BASIC2.77□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 100.9 ms