Protein–RNA interactions for Protein: Q6P9H4

CNKSR3, Connector enhancer of kinase suppressor of ras 3, humanhuman

Predictions only

Length 555 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNKSR3Q6P9H4 RNU6-390P-201ENST00000516259 103 ntBASIC4.14□□□□□ -1.75
CNKSR3Q6P9H4 RNU6-677P-201ENST00000516914 101 ntBASIC4.14□□□□□ -1.75
CNKSR3Q6P9H4 AP003123.1-201ENST00000526041 333 ntTSL 2 BASIC4.14□□□□□ -1.75
CNKSR3Q6P9H4 AL359232.1-201ENST00000556361 442 ntTSL 3 BASIC4.14□□□□□ -1.75
CNKSR3Q6P9H4 AC097467.3-205ENST00000597955 594 ntTSL 5 BASIC4.14□□□□□ -1.75
CNKSR3Q6P9H4 AL158827.2-201ENST00000602494 330 ntBASIC4.14□□□□□ -1.75
CNKSR3Q6P9H4 AL390123.1-201ENST00000603216 237 ntBASIC4.14□□□□□ -1.75
CNKSR3Q6P9H4 AL591516.1-201ENST00000611326 274 ntBASIC4.14□□□□□ -1.75
CNKSR3Q6P9H4 AL691447.3-201ENST00000635020 330 ntBASIC4.14□□□□□ -1.75
CNKSR3Q6P9H4 MAP3K7-202ENST00000369325 4633 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
CNKSR3Q6P9H4 C1orf112-203ENST00000413811 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC4.14□□□□□ -1.75
CNKSR3Q6P9H4 SETDB2-202ENST00000317257 5619 ntAPPRIS ALT2 TSL 1 (best) BASIC4.13□□□□□ -1.75
CNKSR3Q6P9H4 NDUFAF4-201ENST00000316149 2399 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
CNKSR3Q6P9H4 ADAM28-201ENST00000265769 7052 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
CNKSR3Q6P9H4 EEF1A1-211ENST00000615060 3508 ntTSL 5 BASIC4.13□□□□□ -1.75
CNKSR3Q6P9H4 ZNF534-204ENST00000433050 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC4.13□□□□□ -1.75
CNKSR3Q6P9H4 SLC30A6-204ENST00000406369 4589 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
CNKSR3Q6P9H4 RNY1-201ENST00000364228 113 ntBASIC4.13□□□□□ -1.75
CNKSR3Q6P9H4 RNA5SP189-201ENST00000364920 115 ntBASIC4.13□□□□□ -1.75
CNKSR3Q6P9H4 Y_RNA.297-201ENST00000364950 91 ntBASIC4.13□□□□□ -1.75
CNKSR3Q6P9H4 RNU6-708P-201ENST00000384217 107 ntBASIC4.13□□□□□ -1.75
CNKSR3Q6P9H4 Y_RNA.471-201ENST00000384312 102 ntBASIC4.13□□□□□ -1.75
CNKSR3Q6P9H4 RNU6-790P-201ENST00000384479 105 ntBASIC4.13□□□□□ -1.75
CNKSR3Q6P9H4 MIR215-201ENST00000384858 110 ntBASIC4.13□□□□□ -1.75
CNKSR3Q6P9H4 MIR625-201ENST00000385047 85 ntBASIC4.13□□□□□ -1.75
CNKSR3Q6P9H4 SNORD58.1-201ENST00000391313 66 ntBASIC4.13□□□□□ -1.75
CNKSR3Q6P9H4 RNU2-71P-201ENST00000411395 189 ntBASIC4.13□□□□□ -1.75
CNKSR3Q6P9H4 Z92545.1-201ENST00000411782 234 ntBASIC4.13□□□□□ -1.75
CNKSR3Q6P9H4 UTS2B-203ENST00000427544 676 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
CNKSR3Q6P9H4 AL451129.1-201ENST00000437471 285 ntTSL 3 BASIC4.13□□□□□ -1.75
CNKSR3Q6P9H4 RPEP5-201ENST00000441137 268 ntBASIC4.13□□□□□ -1.75
CNKSR3Q6P9H4 DAP3P1-201ENST00000441522 278 ntBASIC4.13□□□□□ -1.75
CNKSR3Q6P9H4 RPL31P60-201ENST00000478450 367 ntBASIC4.13□□□□□ -1.75
CNKSR3Q6P9H4 MTND3P25-201ENST00000509243 135 ntBASIC4.13□□□□□ -1.75
CNKSR3Q6P9H4 AC005921.1-201ENST00000510589 286 ntBASIC4.13□□□□□ -1.75
CNKSR3Q6P9H4 AC113155.1-201ENST00000511141 769 ntBASIC4.13□□□□□ -1.75
CNKSR3Q6P9H4 AC034114.1-201ENST00000520293 285 ntBASIC4.13□□□□□ -1.75
CNKSR3Q6P9H4 AC013565.1-201ENST00000565938 597 ntTSL 2 BASIC4.13□□□□□ -1.75
CNKSR3Q6P9H4 MIR4273-201ENST00000582824 84 ntBASIC4.13□□□□□ -1.75
CNKSR3Q6P9H4 MIR3133-201ENST00000583157 78 ntBASIC4.13□□□□□ -1.75
CNKSR3Q6P9H4 KLHL23-207ENST00000602521 630 ntTSL 3 BASIC4.13□□□□□ -1.75
CNKSR3Q6P9H4 CCNYL2-203ENST00000638057 730 ntTSL 3 BASIC4.13□□□□□ -1.75
CNKSR3Q6P9H4 HMGN5-201ENST00000358130 2126 ntAPPRIS P2 TSL 2 BASIC4.13□□□□□ -1.75
CNKSR3Q6P9H4 CNOT1-201ENST00000317147 8471 ntAPPRIS P3 TSL 1 (best) BASIC4.13□□□□□ -1.75
CNKSR3Q6P9H4 OR2L3-201ENST00000359959 2792 ntAPPRIS P1 BASIC4.13□□□□□ -1.75
CNKSR3Q6P9H4 LINC01566-202ENST00000569242 2801 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
CNKSR3Q6P9H4 PARP8-201ENST00000281631 7177 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
CNKSR3Q6P9H4 ZSCAN26-204ENST00000614088 2321 ntTSL 3 BASIC4.12□□□□□ -1.75
CNKSR3Q6P9H4 UBE2D3-233ENST00000618836 3472 ntAPPRIS ALT1 TSL 5 BASIC4.12□□□□□ -1.75
CNKSR3Q6P9H4 Y_RNA.183-201ENST00000363882 113 ntBASIC4.12□□□□□ -1.75
CNKSR3Q6P9H4 Y_RNA.237-201ENST00000364439 102 ntBASIC4.12□□□□□ -1.75
CNKSR3Q6P9H4 RNA5SP267-201ENST00000364893 126 ntBASIC4.12□□□□□ -1.75
CNKSR3Q6P9H4 NDUFB4P4-201ENST00000404822 243 ntBASIC4.12□□□□□ -1.75
CNKSR3Q6P9H4 RNU2-43P-201ENST00000410306 190 ntBASIC4.12□□□□□ -1.75
CNKSR3Q6P9H4 ELF3-AS1-201ENST00000415582 500 ntTSL 2 BASIC4.12□□□□□ -1.75
CNKSR3Q6P9H4 AL158156.1-201ENST00000422509 473 ntBASIC4.12□□□□□ -1.75
CNKSR3Q6P9H4 SIRPG-AS1-201ENST00000437384 410 ntTSL 3 BASIC4.12□□□□□ -1.75
CNKSR3Q6P9H4 LINC02264-201ENST00000442020 576 ntTSL 3 BASIC4.12□□□□□ -1.75
CNKSR3Q6P9H4 AL360271.2-201ENST00000447710 161 ntBASIC4.12□□□□□ -1.75
CNKSR3Q6P9H4 RN7SL585P-201ENST00000470538 280 ntBASIC4.12□□□□□ -1.75
CNKSR3Q6P9H4 RPL32P34-201ENST00000486380 400 ntBASIC4.12□□□□□ -1.75
CNKSR3Q6P9H4 LINC02110-201ENST00000503870 546 ntTSL 3 BASIC4.12□□□□□ -1.75
CNKSR3Q6P9H4 HMGB1P22-201ENST00000505315 124 ntBASIC4.12□□□□□ -1.75
CNKSR3Q6P9H4 NDUFB4P9-201ENST00000511646 388 ntBASIC4.12□□□□□ -1.75
CNKSR3Q6P9H4 LINC02374-202ENST00000515222 578 ntTSL 4 BASIC4.12□□□□□ -1.75
CNKSR3Q6P9H4 RNU6-255P-201ENST00000516957 105 ntBASIC4.12□□□□□ -1.75
CNKSR3Q6P9H4 AC090568.2-205ENST00000518631 576 ntTSL 4 BASIC4.12□□□□□ -1.75
CNKSR3Q6P9H4 AP004242.1-201ENST00000533701 349 ntBASIC4.12□□□□□ -1.75
CNKSR3Q6P9H4 EGLN3-AS1-201ENST00000555922 308 ntTSL 3 BASIC4.12□□□□□ -1.75
CNKSR3Q6P9H4 AC104564.2-201ENST00000581240 270 ntTSL 3 BASIC4.12□□□□□ -1.75
CNKSR3Q6P9H4 MIR15A-201ENST00000607334 83 ntBASIC4.12□□□□□ -1.75
CNKSR3Q6P9H4 DLEU2_2.2-201ENST00000615474 90 ntBASIC4.12□□□□□ -1.75
CNKSR3Q6P9H4 AL591424.2-201ENST00000617023 128 ntBASIC4.12□□□□□ -1.75
CNKSR3Q6P9H4 MIR6130-201ENST00000619419 109 ntBASIC4.12□□□□□ -1.75
CNKSR3Q6P9H4 AL031601.2-202ENST00000622650 282 ntBASIC4.12□□□□□ -1.75
CNKSR3Q6P9H4 AL807742.1-203ENST00000637444 759 ntTSL 5 BASIC4.12□□□□□ -1.75
CNKSR3Q6P9H4 AC126323.6-202ENST00000568092 3511 ntBASIC4.12□□□□□ -1.75
CNKSR3Q6P9H4 ZNF382-203ENST00000435416 3865 ntAPPRIS ALT1 TSL 1 (best) BASIC4.12□□□□□ -1.75
CNKSR3Q6P9H4 RXFP1-205ENST00000448688 3861 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
CNKSR3Q6P9H4 TLR10-206ENST00000508334 2616 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
CNKSR3Q6P9H4 SPATA31D2P-201ENST00000429999 4388 ntBASIC4.12□□□□□ -1.75
CNKSR3Q6P9H4 CCDC178-204ENST00000403303 3354 ntAPPRIS ALT2 TSL 1 (best) BASIC4.12□□□□□ -1.75
CNKSR3Q6P9H4 D21S2088E-201ENST00000262354 1725 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
CNKSR3Q6P9H4 PREPL-206ENST00000409936 5212 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
CNKSR3Q6P9H4 MARCH1-201ENST00000274056 5367 ntAPPRIS P1 TSL 4 BASIC4.12□□□□□ -1.75
CNKSR3Q6P9H4 ELAVL4-203ENST00000371821 3349 ntTSL 5 BASIC4.11□□□□□ -1.75
CNKSR3Q6P9H4 GLCE-202ENST00000559420 4840 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
CNKSR3Q6P9H4 LUM-201ENST00000266718 3008 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
CNKSR3Q6P9H4 TRIM36-201ENST00000282369 4050 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
CNKSR3Q6P9H4 ZNF705D-202ENST00000400085 3377 ntAPPRIS P1 TSL 5 BASIC4.11□□□□□ -1.75
CNKSR3Q6P9H4 RNU6-662P-201ENST00000384253 104 ntBASIC4.11□□□□□ -1.75
CNKSR3Q6P9H4 MIR578-201ENST00000384828 96 ntBASIC4.11□□□□□ -1.75
CNKSR3Q6P9H4 RNU6-325P-201ENST00000411132 105 ntBASIC4.11□□□□□ -1.75
CNKSR3Q6P9H4 EIF4EP2-201ENST00000422816 654 ntBASIC4.11□□□□□ -1.75
CNKSR3Q6P9H4 LINC01698-201ENST00000443636 727 ntTSL 3 BASIC4.11□□□□□ -1.75
CNKSR3Q6P9H4 HMGN2P13-201ENST00000476476 274 ntBASIC4.11□□□□□ -1.75
CNKSR3Q6P9H4 RNU6-1073P-201ENST00000517182 106 ntBASIC4.11□□□□□ -1.75
CNKSR3Q6P9H4 AC069113.1-201ENST00000517763 267 ntBASIC4.11□□□□□ -1.75
CNKSR3Q6P9H4 NDST1-AS1-201ENST00000519040 368 ntTSL 2 BASIC4.11□□□□□ -1.75
CNKSR3Q6P9H4 AC144568.1-201ENST00000520139 137 ntBASIC4.11□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 119 ms