Protein–RNA interactions for Protein: Q5W0Q7

USPL1, SUMO-specific isopeptidase USPL1, humanhuman

Predictions only

Length 1,092 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USPL1Q5W0Q7 RNU6-15P-201ENST00000384534 107 ntBASIC4.81□□□□□ -1.64
USPL1Q5W0Q7 RNU6-2-201ENST00000384627 107 ntBASIC4.81□□□□□ -1.64
USPL1Q5W0Q7 RNU6-29P-201ENST00000384637 107 ntBASIC4.81□□□□□ -1.64
USPL1Q5W0Q7 RNU6-9-201ENST00000384776 107 ntBASIC4.81□□□□□ -1.64
USPL1Q5W0Q7 RNU6-33P-201ENST00000384793 107 ntBASIC4.81□□□□□ -1.64
USPL1Q5W0Q7 RNU6-700P-201ENST00000391043 107 ntBASIC4.81□□□□□ -1.64
USPL1Q5W0Q7 NDUFB4P4-201ENST00000404822 243 ntBASIC4.81□□□□□ -1.64
USPL1Q5W0Q7 RNU2-33P-201ENST00000410344 192 ntBASIC4.81□□□□□ -1.64
USPL1Q5W0Q7 ATP5A1P2-201ENST00000412323 255 ntBASIC4.81□□□□□ -1.64
USPL1Q5W0Q7 AC012370.1-201ENST00000419244 530 ntTSL 3 BASIC4.81□□□□□ -1.64
USPL1Q5W0Q7 GPC5-AS1-201ENST00000419288 393 ntTSL 3 BASIC4.81□□□□□ -1.64
USPL1Q5W0Q7 RPL21P2-201ENST00000440049 481 ntBASIC4.81□□□□□ -1.64
USPL1Q5W0Q7 CYCSP32-201ENST00000440548 321 ntBASIC4.81□□□□□ -1.64
USPL1Q5W0Q7 AL390961.1-201ENST00000446557 319 ntTSL 2 BASIC4.81□□□□□ -1.64
USPL1Q5W0Q7 RPS3AP46-201ENST00000448352 682 ntBASIC4.81□□□□□ -1.64
USPL1Q5W0Q7 HMGN2P13-201ENST00000476476 274 ntBASIC4.81□□□□□ -1.64
USPL1Q5W0Q7 FO393415.2-201ENST00000480085 343 ntBASIC4.81□□□□□ -1.64
USPL1Q5W0Q7 SNORA25.11-201ENST00000515935 105 ntBASIC4.81□□□□□ -1.64
USPL1Q5W0Q7 AC068880.3-201ENST00000519185 179 ntTSL 5 BASIC4.81□□□□□ -1.64
USPL1Q5W0Q7 AL136038.2-201ENST00000553983 283 ntTSL 3 BASIC4.81□□□□□ -1.64
USPL1Q5W0Q7 AL139395.1-201ENST00000603662 160 ntBASIC4.81□□□□□ -1.64
USPL1Q5W0Q7 AC004805.2-201ENST00000605382 482 ntBASIC4.81□□□□□ -1.64
USPL1Q5W0Q7 RNU6-6P-201ENST00000606623 107 ntBASIC4.81□□□□□ -1.64
USPL1Q5W0Q7 HIKESHI-208ENST00000618164 499 ntTSL 5 BASIC4.81□□□□□ -1.64
USPL1Q5W0Q7 SMIM2-AS1-204ENST00000619472 746 ntTSL 3 BASIC4.81□□□□□ -1.64
USPL1Q5W0Q7 NEAT1-202ENST00000501122 22743 ntBASIC4.81□□□□□ -1.64
USPL1Q5W0Q7 SMC1B-201ENST00000357450 4201 ntAPPRIS P1 TSL 5 BASIC4.81□□□□□ -1.64
USPL1Q5W0Q7 PKHD1-202ENST00000371117 16282 ntAPPRIS P4 TSL 1 (best) BASIC4.81□□□□□ -1.64
USPL1Q5W0Q7 DOCK7-202ENST00000340370 6731 ntAPPRIS P3 TSL 2 BASIC4.81□□□□□ -1.64
USPL1Q5W0Q7 CFTR-201ENST00000003084 6132 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
USPL1Q5W0Q7 LRIT3-202ENST00000594814 3566 ntAPPRIS P1 TSL 5 BASIC4.8□□□□□ -1.64
USPL1Q5W0Q7 AC068254.2-201ENST00000623938 3577 ntBASIC4.8□□□□□ -1.64
USPL1Q5W0Q7 RNU6-472P-201ENST00000384299 107 ntBASIC4.8□□□□□ -1.64
USPL1Q5W0Q7 MIR34A-201ENST00000385130 110 ntBASIC4.8□□□□□ -1.64
USPL1Q5W0Q7 RNU6ATAC23P-201ENST00000408448 123 ntBASIC4.8□□□□□ -1.64
USPL1Q5W0Q7 RN7SKP177-201ENST00000410567 355 ntBASIC4.8□□□□□ -1.64
USPL1Q5W0Q7 RNA5SP104-201ENST00000410989 118 ntBASIC4.8□□□□□ -1.64
USPL1Q5W0Q7 HMGB1P37-201ENST00000439613 609 ntBASIC4.8□□□□□ -1.64
USPL1Q5W0Q7 OTOGL-202ENST00000458043 8083 ntAPPRIS P5 TSL 5 BASIC4.8□□□□□ -1.64
USPL1Q5W0Q7 RPL30P10-201ENST00000488148 337 ntBASIC4.8□□□□□ -1.64
USPL1Q5W0Q7 LINC02494-201ENST00000509824 427 ntTSL 3 BASIC4.8□□□□□ -1.64
USPL1Q5W0Q7 RNU6-1256P-201ENST00000516539 103 ntBASIC4.8□□□□□ -1.64
USPL1Q5W0Q7 RNU4ATAC6P-201ENST00000516592 126 ntBASIC4.8□□□□□ -1.64
USPL1Q5W0Q7 RNA5SP290-201ENST00000517133 127 ntBASIC4.8□□□□□ -1.64
USPL1Q5W0Q7 AC100807.1-201ENST00000517640 552 ntTSL 5 BASIC4.8□□□□□ -1.64
USPL1Q5W0Q7 AC091144.1-201ENST00000519573 138 ntBASIC4.8□□□□□ -1.64
USPL1Q5W0Q7 AC113192.5-201ENST00000528779 486 ntTSL 2 BASIC4.8□□□□□ -1.64
USPL1Q5W0Q7 AC023157.2-201ENST00000540596 141 ntBASIC4.8□□□□□ -1.64
USPL1Q5W0Q7 PCED1B-AS1-208ENST00000551898 359 ntTSL 3 BASIC4.8□□□□□ -1.64
USPL1Q5W0Q7 AL122017.1-202ENST00000570612 319 ntTSL 5 BASIC4.8□□□□□ -1.64
USPL1Q5W0Q7 RPS29P30-201ENST00000600975 111 ntBASIC4.8□□□□□ -1.64
USPL1Q5W0Q7 AC005000.2-201ENST00000605468 310 ntBASIC4.8□□□□□ -1.64
USPL1Q5W0Q7 AL355810.1-201ENST00000614629 552 ntBASIC4.8□□□□□ -1.64
USPL1Q5W0Q7 MIR3651-201ENST00000630427 90 ntBASIC4.8□□□□□ -1.64
USPL1Q5W0Q7 ADGRL2-201ENST00000319517 5479 ntAPPRIS P2 TSL 1 (best) BASIC4.8□□□□□ -1.64
USPL1Q5W0Q7 ATF7IP2-202ENST00000356427 3463 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
USPL1Q5W0Q7 MTND5P9-201ENST00000503854 1755 ntBASIC4.8□□□□□ -1.64
USPL1Q5W0Q7 MYOZ2-201ENST00000307128 2597 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
USPL1Q5W0Q7 KANSL1L-209ENST00000457374 2264 ntTSL 2 BASIC4.8□□□□□ -1.64
USPL1Q5W0Q7 AC233263.6-201ENST00000631132 1963 ntBASIC4.8□□□□□ -1.64
USPL1Q5W0Q7 RBM39-201ENST00000253363 2488 ntAPPRIS P4 TSL 1 (best) BASIC4.8□□□□□ -1.64
USPL1Q5W0Q7 ANKRD30A-202ENST00000374660 4762 ntAPPRIS ALT2 TSL 5 BASIC4.8□□□□□ -1.64
USPL1Q5W0Q7 POSTN-202ENST00000379743 3196 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
USPL1Q5W0Q7 ADGRL2-203ENST00000370713 5382 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
USPL1Q5W0Q7 HSPA4L-202ENST00000505726 2639 ntTSL 2 BASIC4.79□□□□□ -1.64
USPL1Q5W0Q7 NCAPGP1-201ENST00000505112 1814 ntBASIC4.79□□□□□ -1.64
USPL1Q5W0Q7 LINC01828-203ENST00000452716 3250 ntTSL 5 BASIC4.79□□□□□ -1.64
USPL1Q5W0Q7 MPDZ-211ENST00000536827 6176 ntAPPRIS ALT2 TSL 1 (best) BASIC4.79□□□□□ -1.64
USPL1Q5W0Q7 GDAP2-202ENST00000369443 8828 ntAPPRIS P1 TSL 2 BASIC4.79□□□□□ -1.64
USPL1Q5W0Q7 AC007685.1-201ENST00000329806 452 ntBASIC4.79□□□□□ -1.64
USPL1Q5W0Q7 MIR448-201ENST00000362131 111 ntBASIC4.79□□□□□ -1.64
USPL1Q5W0Q7 Y_RNA.214-201ENST00000364201 112 ntBASIC4.79□□□□□ -1.64
USPL1Q5W0Q7 Y_RNA.350-201ENST00000365409 98 ntBASIC4.79□□□□□ -1.64
USPL1Q5W0Q7 Y_RNA.533-201ENST00000384596 114 ntBASIC4.79□□□□□ -1.64
USPL1Q5W0Q7 TRAJ34-201ENST00000390503 58 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
USPL1Q5W0Q7 SNORA69.1-201ENST00000390904 137 ntBASIC4.79□□□□□ -1.64
USPL1Q5W0Q7 LINC00428-201ENST00000415620 227 ntTSL 5 BASIC4.79□□□□□ -1.64
USPL1Q5W0Q7 AL117339.3-201ENST00000418733 162 ntBASIC4.79□□□□□ -1.64
USPL1Q5W0Q7 AL451129.1-201ENST00000437471 285 ntTSL 3 BASIC4.79□□□□□ -1.64
USPL1Q5W0Q7 NHS-AS1-201ENST00000452788 366 ntTSL 3 BASIC4.79□□□□□ -1.64
USPL1Q5W0Q7 RNU6-1132P-201ENST00000459214 107 ntBASIC4.79□□□□□ -1.64
USPL1Q5W0Q7 RPS26P15-201ENST00000488067 348 ntBASIC4.79□□□□□ -1.64
USPL1Q5W0Q7 SNORA40.15-201ENST00000516884 107 ntBASIC4.79□□□□□ -1.64
USPL1Q5W0Q7 AC009292.2-201ENST00000558889 291 ntTSL 5 BASIC4.79□□□□□ -1.64
USPL1Q5W0Q7 AL158827.2-201ENST00000602494 330 ntBASIC4.79□□□□□ -1.64
USPL1Q5W0Q7 AL390123.1-201ENST00000603216 237 ntBASIC4.79□□□□□ -1.64
USPL1Q5W0Q7 AC243829.7-201ENST00000633081 225 ntBASIC4.79□□□□□ -1.64
USPL1Q5W0Q7 AL691447.3-201ENST00000635020 330 ntBASIC4.79□□□□□ -1.64
USPL1Q5W0Q7 PUS7L-207ENST00000551923 3313 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
USPL1Q5W0Q7 GPRC6A-203ENST00000530250 2310 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
USPL1Q5W0Q7 ZNF99-202ENST00000596209 7817 ntTSL 5 BASIC4.79□□□□□ -1.64
USPL1Q5W0Q7 OR5H14-202ENST00000641380 7323 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
USPL1Q5W0Q7 OR52E4-202ENST00000641726 2947 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
USPL1Q5W0Q7 PCLO-206ENST00000437081 3786 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
USPL1Q5W0Q7 IFI16-208ENST00000448393 2245 ntAPPRIS ALT2 TSL 5 BASIC4.78□□□□□ -1.64
USPL1Q5W0Q7 TAX1BP1-213ENST00000543117 3365 ntAPPRIS ALT2 TSL 2 BASIC4.78□□□□□ -1.64
USPL1Q5W0Q7 ZSCAN26-204ENST00000614088 2321 ntTSL 3 BASIC4.78□□□□□ -1.64
USPL1Q5W0Q7 IFI44L-201ENST00000370751 5874 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
USPL1Q5W0Q7 CASP1-201ENST00000353247 423 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
USPL1Q5W0Q7 SNORA51.11-201ENST00000384442 131 ntBASIC4.78□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 137.5 ms