Protein–RNA interactions for Protein: Q2KHR2

RFX7, DNA-binding protein RFX7, humanhuman

Predictions only

Length 1,363 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX7Q2KHR2 RNA5SP290-201ENST00000517133 127 ntBASIC1.08□□□□□ -2.24
RFX7Q2KHR2 AC022861.1-201ENST00000522981 663 ntBASIC1.08□□□□□ -2.24
RFX7Q2KHR2 LINC01493-203ENST00000534756 509 ntTSL 3 BASIC1.08□□□□□ -2.24
RFX7Q2KHR2 AL450442.1-201ENST00000554042 854 ntTSL 1 (best) BASIC1.08□□□□□ -2.24
RFX7Q2KHR2 AP001496.1-201ENST00000579113 471 ntTSL 4 BASIC1.08□□□□□ -2.24
RFX7Q2KHR2 AC127540.1-201ENST00000580311 689 ntTSL 5 BASIC1.08□□□□□ -2.24
RFX7Q2KHR2 AC005261.5-201ENST00000596280 355 ntBASIC1.08□□□□□ -2.24
RFX7Q2KHR2 HSPE1P19-201ENST00000603327 295 ntBASIC1.08□□□□□ -2.24
RFX7Q2KHR2 AC083798.2-205ENST00000608015 575 ntTSL 5 BASIC1.08□□□□□ -2.24
RFX7Q2KHR2 AC023490.1-201ENST00000614584 375 ntTSL 2 BASIC1.08□□□□□ -2.24
RFX7Q2KHR2 AC011718.1-201ENST00000622906 375 ntTSL 1 (best) BASIC1.08□□□□□ -2.24
RFX7Q2KHR2 AC007490.1-201ENST00000624321 703 ntBASIC1.08□□□□□ -2.24
RFX7Q2KHR2 AC087821.2-201ENST00000637086 450 ntBASIC1.08□□□□□ -2.24
RFX7Q2KHR2 GS1-279B7.1-204ENST00000641809 378 ntBASIC1.08□□□□□ -2.24
RFX7Q2KHR2 C1orf141-202ENST00000371006 2053 ntAPPRIS P3 TSL 2 BASIC1.08□□□□□ -2.24
RFX7Q2KHR2 RNU4-41P-201ENST00000364426 143 ntBASIC1.08□□□□□ -2.24
RFX7Q2KHR2 SNORA70.7-201ENST00000384159 133 ntBASIC1.08□□□□□ -2.24
RFX7Q2KHR2 TRAJ22-201ENST00000390515 63 ntAPPRIS P1 BASIC1.08□□□□□ -2.24
RFX7Q2KHR2 AL160275.3-201ENST00000423876 471 ntBASIC1.08□□□□□ -2.24
RFX7Q2KHR2 AC092813.2-201ENST00000434540 399 ntTSL 3 BASIC1.08□□□□□ -2.24
RFX7Q2KHR2 SNRPEP9-201ENST00000436794 238 ntBASIC1.08□□□□□ -2.24
RFX7Q2KHR2 AL583843.1-201ENST00000456070 346 ntBASIC1.08□□□□□ -2.24
RFX7Q2KHR2 SCEL-AS1-201ENST00000456280 493 ntTSL 3 BASIC1.08□□□□□ -2.24
RFX7Q2KHR2 AL441985.1-201ENST00000457727 251 ntBASIC1.08□□□□□ -2.24
RFX7Q2KHR2 AC026410.2-201ENST00000460281 156 ntBASIC1.08□□□□□ -2.24
RFX7Q2KHR2 AC008379.1-201ENST00000463655 464 ntBASIC1.08□□□□□ -2.24
RFX7Q2KHR2 SNORA4.4-201ENST00000515921 135 ntBASIC1.08□□□□□ -2.24
RFX7Q2KHR2 NRON-201ENST00000517270 370 ntBASIC1.08□□□□□ -2.24
RFX7Q2KHR2 AC118942.1-202ENST00000529081 578 ntTSL 5 BASIC1.08□□□□□ -2.24
RFX7Q2KHR2 AC005951.2-201ENST00000576282 495 ntBASIC1.08□□□□□ -2.24
RFX7Q2KHR2 AL357094.1-201ENST00000603845 844 ntBASIC1.08□□□□□ -2.24
RFX7Q2KHR2 AC243773.3-201ENST00000613270 256 ntBASIC1.08□□□□□ -2.24
RFX7Q2KHR2 AC016911.1-201ENST00000613297 452 ntBASIC1.08□□□□□ -2.24
RFX7Q2KHR2 AL596245.1-201ENST00000618994 362 ntBASIC1.08□□□□□ -2.24
RFX7Q2KHR2 Y_RNA.30-201ENST00000362572 97 ntBASIC1.07□□□□□ -2.24
RFX7Q2KHR2 Y_RNA.295-201ENST00000364918 102 ntBASIC1.07□□□□□ -2.24
RFX7Q2KHR2 AC083799.1-201ENST00000366451 910 ntBASIC1.07□□□□□ -2.24
RFX7Q2KHR2 AL365184.1-201ENST00000413801 572 ntTSL 3 BASIC1.07□□□□□ -2.24
RFX7Q2KHR2 BTF3P8-201ENST00000414577 526 ntBASIC1.07□□□□□ -2.24
RFX7Q2KHR2 TAF13P2-201ENST00000416876 286 ntBASIC1.07□□□□□ -2.24
RFX7Q2KHR2 LINC01626-201ENST00000431997 452 ntTSL 3 BASIC1.07□□□□□ -2.24
RFX7Q2KHR2 AL596276.1-201ENST00000434465 418 ntBASIC1.07□□□□□ -2.24
RFX7Q2KHR2 AC108752.1-203ENST00000496674 339 ntTSL 5 BASIC1.07□□□□□ -2.24
RFX7Q2KHR2 AC095056.1-201ENST00000503918 425 ntTSL 3 BASIC1.07□□□□□ -2.24
RFX7Q2KHR2 AC107909.2-201ENST00000520844 493 ntTSL 3 BASIC1.07□□□□□ -2.24
RFX7Q2KHR2 MIR4698-201ENST00000577795 80 ntBASIC1.07□□□□□ -2.24
RFX7Q2KHR2 AC004805.2-201ENST00000605382 482 ntBASIC1.07□□□□□ -2.24
RFX7Q2KHR2 AC018638.7-201ENST00000605836 1114 ntBASIC1.07□□□□□ -2.24
RFX7Q2KHR2 AC009233.1-201ENST00000616477 371 ntBASIC1.07□□□□□ -2.24
RFX7Q2KHR2 LRRD1-203ENST00000430130 2661 ntAPPRIS P1 TSL 5 BASIC1.06□□□□□ -2.24
RFX7Q2KHR2 ZNF680P1-201ENST00000436625 1469 ntBASIC1.06□□□□□ -2.24
RFX7Q2KHR2 TEX21P-201ENST00000447107 1476 ntBASIC1.06□□□□□ -2.24
RFX7Q2KHR2 CBX3P1-201ENST00000325243 554 ntBASIC1.06□□□□□ -2.24
RFX7Q2KHR2 RNU6-28P-201ENST00000362378 107 ntBASIC1.06□□□□□ -2.24
RFX7Q2KHR2 RNU6-353P-201ENST00000364266 108 ntBASIC1.06□□□□□ -2.24
RFX7Q2KHR2 RNU6-549P-201ENST00000384433 107 ntBASIC1.06□□□□□ -2.24
RFX7Q2KHR2 MIR625-201ENST00000385047 85 ntBASIC1.06□□□□□ -2.24
RFX7Q2KHR2 RNU11-5P-201ENST00000391216 129 ntBASIC1.06□□□□□ -2.24
RFX7Q2KHR2 RNU6-575P-201ENST00000411326 105 ntBASIC1.06□□□□□ -2.24
RFX7Q2KHR2 AC079150.1-201ENST00000413043 383 ntTSL 3 BASIC1.06□□□□□ -2.24
RFX7Q2KHR2 AC092427.1-201ENST00000439177 601 ntBASIC1.06□□□□□ -2.24
RFX7Q2KHR2 AL161651.1-201ENST00000440882 223 ntBASIC1.06□□□□□ -2.24
RFX7Q2KHR2 AC025428.1-201ENST00000444137 403 ntTSL 3 BASIC1.06□□□□□ -2.24
RFX7Q2KHR2 MTCYBP11-201ENST00000447254 1109 ntBASIC1.06□□□□□ -2.24
RFX7Q2KHR2 TPRKBP1-201ENST00000456243 481 ntBASIC1.06□□□□□ -2.24
RFX7Q2KHR2 AC021382.1-201ENST00000483523 359 ntBASIC1.06□□□□□ -2.24
RFX7Q2KHR2 AC034114.1-201ENST00000520293 285 ntBASIC1.06□□□□□ -2.24
RFX7Q2KHR2 AC021739.1-201ENST00000559631 174 ntBASIC1.06□□□□□ -2.24
RFX7Q2KHR2 AC012170.2-201ENST00000560380 667 ntTSL 3 BASIC1.06□□□□□ -2.24
RFX7Q2KHR2 AC021646.1-201ENST00000605469 484 ntBASIC1.06□□□□□ -2.24
RFX7Q2KHR2 AC090948.3-201ENST00000606713 551 ntTSL 4 BASIC1.06□□□□□ -2.24
RFX7Q2KHR2 CDKN2B-AS_3.1-201ENST00000617587 144 ntBASIC1.06□□□□□ -2.24
RFX7Q2KHR2 AC002550.2-201ENST00000621246 394 ntBASIC1.06□□□□□ -2.24
RFX7Q2KHR2 Z99571.1-201ENST00000636677 394 ntBASIC1.06□□□□□ -2.24
RFX7Q2KHR2 KTN1-214ENST00000554507 2057 ntTSL 1 (best) BASIC1.05□□□□□ -2.24
RFX7Q2KHR2 AC018630.2-201ENST00000534866 2403 ntBASIC1.05□□□□□ -2.24
RFX7Q2KHR2 RNU5E-1-201ENST00000362477 120 ntBASIC1.05□□□□□ -2.24
RFX7Q2KHR2 RNU6-637P-201ENST00000384050 107 ntBASIC1.05□□□□□ -2.24
RFX7Q2KHR2 MIR217-201ENST00000384817 110 ntBASIC1.05□□□□□ -2.24
RFX7Q2KHR2 MIR29C-201ENST00000385231 88 ntBASIC1.05□□□□□ -2.24
RFX7Q2KHR2 TRAJ32-201ENST00000390505 66 ntAPPRIS P1 BASIC1.05□□□□□ -2.24
RFX7Q2KHR2 MIR1302-8-201ENST00000408342 128 ntBASIC1.05□□□□□ -2.24
RFX7Q2KHR2 RPL26P27-201ENST00000414397 437 ntBASIC1.05□□□□□ -2.24
RFX7Q2KHR2 DIAPH3-AS1-201ENST00000422052 428 ntTSL 3 BASIC1.05□□□□□ -2.24
RFX7Q2KHR2 MTCO2P5-201ENST00000422621 426 ntBASIC1.05□□□□□ -2.24
RFX7Q2KHR2 GYPB-201ENST00000429670 239 ntTSL 1 (best) BASIC1.05□□□□□ -2.24
RFX7Q2KHR2 LINC01724-201ENST00000430519 621 ntTSL 3 BASIC1.05□□□□□ -2.24
RFX7Q2KHR2 TRIM60P13-201ENST00000432350 1283 ntBASIC1.05□□□□□ -2.24
RFX7Q2KHR2 NANOGP2-201ENST00000435391 727 ntBASIC1.05□□□□□ -2.24
RFX7Q2KHR2 MTCO1P53-201ENST00000441633 699 ntBASIC1.05□□□□□ -2.24
RFX7Q2KHR2 AL161788.1-201ENST00000441805 169 ntBASIC1.05□□□□□ -2.24
RFX7Q2KHR2 RPL39P6-201ENST00000448289 150 ntBASIC1.05□□□□□ -2.24
RFX7Q2KHR2 RPL7P55-201ENST00000450522 746 ntBASIC1.05□□□□□ -2.24
RFX7Q2KHR2 AP001324.2-201ENST00000461163 319 ntBASIC1.05□□□□□ -2.24
RFX7Q2KHR2 AC117460.1-201ENST00000508964 467 ntTSL 3 BASIC1.05□□□□□ -2.24
RFX7Q2KHR2 SMURF2P1-201ENST00000514992 481 ntBASIC1.05□□□□□ -2.24
RFX7Q2KHR2 AC087854.1-201ENST00000519706 414 ntBASIC1.05□□□□□ -2.24
RFX7Q2KHR2 AP001189.2-201ENST00000527320 189 ntBASIC1.05□□□□□ -2.24
RFX7Q2KHR2 LINC02258-201ENST00000551280 777 ntTSL 2 BASIC1.05□□□□□ -2.24
RFX7Q2KHR2 SNRPGP17-201ENST00000603780 214 ntBASIC1.05□□□□□ -2.24
Retrieved 100 of 98,524 protein–RNA pairs in 117.4 ms