Protein–RNA interactions for Protein: Q12946

FOXF1, Forkhead box protein F1, humanhuman

Predictions only

Length 379 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXF1Q12946 AC093752.1-212ENST00000500559 453 ntTSL 1 (best) BASIC1.37□□□□□ -2.19
FOXF1Q12946 AC108037.1-201ENST00000514103 423 ntTSL 3 BASIC1.37□□□□□ -2.19
FOXF1Q12946 RNU5A-4P-201ENST00000516588 111 ntBASIC1.37□□□□□ -2.19
FOXF1Q12946 RNU6-1003P-201ENST00000517099 105 ntBASIC1.37□□□□□ -2.19
FOXF1Q12946 CD44-AS1-201ENST00000528869 587 ntTSL 4 BASIC1.37□□□□□ -2.19
FOXF1Q12946 AP000907.2-201ENST00000530827 353 ntBASIC1.37□□□□□ -2.19
FOXF1Q12946 AP000462.2-203ENST00000540545 715 ntTSL 5 BASIC1.37□□□□□ -2.19
FOXF1Q12946 PSMA4-205ENST00000558281 773 ntTSL 3 BASIC1.37□□□□□ -2.19
FOXF1Q12946 AC015720.1-201ENST00000565251 277 ntBASIC1.37□□□□□ -2.19
FOXF1Q12946 AL513324.1-201ENST00000575236 632 ntTSL 5 BASIC1.37□□□□□ -2.19
FOXF1Q12946 KC877982.1-201ENST00000602313 470 ntBASIC1.37□□□□□ -2.19
FOXF1Q12946 DPPA3P3-201ENST00000603842 430 ntBASIC1.37□□□□□ -2.19
FOXF1Q12946 AL645939.4-201ENST00000604495 135 ntBASIC1.37□□□□□ -2.19
FOXF1Q12946 AL139022.2-201ENST00000606934 443 ntBASIC1.37□□□□□ -2.19
FOXF1Q12946 AC144521.1-201ENST00000607148 956 ntBASIC1.37□□□□□ -2.19
FOXF1Q12946 MIR6134-201ENST00000617606 109 ntBASIC1.37□□□□□ -2.19
FOXF1Q12946 AL353997.5-201ENST00000618886 171 ntBASIC1.37□□□□□ -2.19
FOXF1Q12946 AC010608.3-201ENST00000625048 527 ntBASIC1.37□□□□□ -2.19
FOXF1Q12946 GYPB-216ENST00000638448 363 ntAPPRIS P1 TSL 1 (best) BASIC1.37□□□□□ -2.19
FOXF1Q12946 MTND5P10-201ENST00000603719 1809 ntBASIC1.37□□□□□ -2.19
FOXF1Q12946 SAGE1-202ENST00000370709 2879 ntAPPRIS P2 TSL 5 BASIC1.37□□□□□ -2.19
FOXF1Q12946 LMBRD1-201ENST00000370570 2099 ntTSL 1 (best) BASIC1.36□□□□□ -2.19
FOXF1Q12946 KTN1-203ENST00000395309 4021 ntAPPRIS ALT2 TSL 5 BASIC1.36□□□□□ -2.19
FOXF1Q12946 ZNF29P-201ENST00000225587 168 ntBASIC1.36□□□□□ -2.19
FOXF1Q12946 RNU1-42P-201ENST00000364033 160 ntBASIC1.36□□□□□ -2.19
FOXF1Q12946 RNU6-14P-201ENST00000384630 106 ntBASIC1.36□□□□□ -2.19
FOXF1Q12946 RNU6-19P-201ENST00000384718 107 ntBASIC1.36□□□□□ -2.19
FOXF1Q12946 MIR517C-201ENST00000385103 95 ntBASIC1.36□□□□□ -2.19
FOXF1Q12946 MIR147B-201ENST00000390185 80 ntBASIC1.36□□□□□ -2.19
FOXF1Q12946 TRAJ11-201ENST00000390526 60 ntAPPRIS P1 BASIC1.36□□□□□ -2.19
FOXF1Q12946 SNORA17.3-201ENST00000391159 129 ntBASIC1.36□□□□□ -2.19
FOXF1Q12946 AL512604.1-201ENST00000404812 257 ntBASIC1.36□□□□□ -2.19
FOXF1Q12946 AL158834.1-201ENST00000419441 466 ntTSL 5 BASIC1.36□□□□□ -2.19
FOXF1Q12946 XKRYP1-201ENST00000423438 492 ntBASIC1.36□□□□□ -2.19
FOXF1Q12946 MTCO2P23-201ENST00000425216 680 ntBASIC1.36□□□□□ -2.19
FOXF1Q12946 AC064852.1-201ENST00000427571 851 ntTSL 3 BASIC1.36□□□□□ -2.19
FOXF1Q12946 XKRYP2-201ENST00000432915 492 ntBASIC1.36□□□□□ -2.19
FOXF1Q12946 AL157937.1-201ENST00000435092 443 ntTSL 3 BASIC1.36□□□□□ -2.19
FOXF1Q12946 AC003071.1-201ENST00000451219 789 ntBASIC1.36□□□□□ -2.19
FOXF1Q12946 DUXAP8-207ENST00000456786 622 ntBASIC1.36□□□□□ -2.19
FOXF1Q12946 SNORD97-201ENST00000459187 142 ntBASIC1.36□□□□□ -2.19
FOXF1Q12946 RPL39P36-201ENST00000490784 156 ntBASIC1.36□□□□□ -2.19
FOXF1Q12946 AC010261.1-201ENST00000514411 457 ntTSL 5 BASIC1.36□□□□□ -2.19
FOXF1Q12946 RNU6-201P-201ENST00000517100 61 ntBASIC1.36□□□□□ -2.19
FOXF1Q12946 SMIM18-201ENST00000517349 905 ntAPPRIS P1 TSL 2 BASIC1.36□□□□□ -2.19
FOXF1Q12946 AC018541.1-202ENST00000518687 584 ntTSL 4 BASIC1.36□□□□□ -2.19
FOXF1Q12946 UTP23-205ENST00000520733 369 ntTSL 3 BASIC1.36□□□□□ -2.19
FOXF1Q12946 IGLVVI-22-1-201ENST00000521183 211 ntBASIC1.36□□□□□ -2.19
FOXF1Q12946 MTATP6P15-201ENST00000527233 835 ntBASIC1.36□□□□□ -2.19
FOXF1Q12946 AC027018.1-202ENST00000534723 383 ntTSL 3 BASIC1.36□□□□□ -2.19
FOXF1Q12946 HSBP1P1-201ENST00000555205 166 ntBASIC1.36□□□□□ -2.19
FOXF1Q12946 AC018554.1-201ENST00000565506 800 ntTSL 2 BASIC1.36□□□□□ -2.19
FOXF1Q12946 MIR4303-201ENST00000581299 66 ntBASIC1.36□□□□□ -2.19
FOXF1Q12946 MIR4307-201ENST00000582802 84 ntBASIC1.36□□□□□ -2.19
FOXF1Q12946 LINC01897-203ENST00000591503 369 ntTSL 2 BASIC1.36□□□□□ -2.19
FOXF1Q12946 BNIP3P23-201ENST00000599655 511 ntBASIC1.36□□□□□ -2.19
FOXF1Q12946 AC174048.1-201ENST00000603389 144 ntBASIC1.36□□□□□ -2.19
FOXF1Q12946 AL355297.2-201ENST00000604792 129 ntBASIC1.36□□□□□ -2.19
FOXF1Q12946 RNU6-91P-201ENST00000607774 107 ntBASIC1.36□□□□□ -2.19
FOXF1Q12946 TLR6-205ENST00000610323 1443 ntTSL 5 BASIC1.36□□□□□ -2.19
FOXF1Q12946 AC244093.3-201ENST00000615419 411 ntTSL 3 BASIC1.36□□□□□ -2.19
FOXF1Q12946 uc_338.12-201ENST00000616344 181 ntBASIC1.36□□□□□ -2.19
FOXF1Q12946 SEMG2-201ENST00000372769 2051 ntAPPRIS P1 TSL 1 (best) BASIC1.36□□□□□ -2.19
FOXF1Q12946 CYSLTR1-201ENST00000373304 2576 ntAPPRIS P1 TSL 1 (best) BASIC1.36□□□□□ -2.19
FOXF1Q12946 CENPQ-201ENST00000335783 1733 ntAPPRIS P1 TSL 1 (best) BASIC1.35□□□□□ -2.19
FOXF1Q12946 AL391994.1-201ENST00000254724 282 ntBASIC1.35□□□□□ -2.19
FOXF1Q12946 LINC00305-201ENST00000323355 873 ntTSL 1 (best) BASIC1.35□□□□□ -2.19
FOXF1Q12946 U8.3-201ENST00000363321 132 ntBASIC1.35□□□□□ -2.19
FOXF1Q12946 RNU6-511P-201ENST00000363496 107 ntBASIC1.35□□□□□ -2.19
FOXF1Q12946 RNU6-512P-201ENST00000364438 103 ntBASIC1.35□□□□□ -2.19
FOXF1Q12946 RNU6-60P-201ENST00000364792 103 ntBASIC1.35□□□□□ -2.19
FOXF1Q12946 RNA5SP240-201ENST00000365355 128 ntBASIC1.35□□□□□ -2.19
FOXF1Q12946 MIR320A-201ENST00000385302 82 ntBASIC1.35□□□□□ -2.19
FOXF1Q12946 SNORA67.5-201ENST00000391036 107 ntBASIC1.35□□□□□ -2.19
FOXF1Q12946 AF130351.1-202ENST00000400562 808 ntAPPRIS P5 TSL 3 BASIC1.35□□□□□ -2.19
FOXF1Q12946 RNU2-62P-201ENST00000410868 191 ntBASIC1.35□□□□□ -2.19
FOXF1Q12946 AC078974.1-201ENST00000411597 223 ntBASIC1.35□□□□□ -2.19
FOXF1Q12946 VPS26BP1-201ENST00000417155 755 ntBASIC1.35□□□□□ -2.19
FOXF1Q12946 RAC1P6-201ENST00000423911 575 ntBASIC1.35□□□□□ -2.19
FOXF1Q12946 NAALADL2-AS2-201ENST00000424690 1038 ntTSL 5 BASIC1.35□□□□□ -2.19
FOXF1Q12946 AL353777.1-201ENST00000425552 326 ntBASIC1.35□□□□□ -2.19
FOXF1Q12946 PTGES3P4-201ENST00000426243 356 ntBASIC1.35□□□□□ -2.19
FOXF1Q12946 AL354695.1-201ENST00000427935 228 ntBASIC1.35□□□□□ -2.19
FOXF1Q12946 AL591704.1-201ENST00000432574 275 ntBASIC1.35□□□□□ -2.19
FOXF1Q12946 AL356475.1-201ENST00000440321 341 ntTSL 5 BASIC1.35□□□□□ -2.19
FOXF1Q12946 AL035415.1-201ENST00000447150 289 ntTSL 5 BASIC1.35□□□□□ -2.19
FOXF1Q12946 AL009048.1-201ENST00000450437 298 ntBASIC1.35□□□□□ -2.19
FOXF1Q12946 MTCO1P42-201ENST00000457379 726 ntBASIC1.35□□□□□ -2.19
FOXF1Q12946 AL441985.1-201ENST00000457727 251 ntBASIC1.35□□□□□ -2.19
FOXF1Q12946 RNU6-953P-201ENST00000459154 107 ntBASIC1.35□□□□□ -2.19
FOXF1Q12946 AC023790.1-201ENST00000482174 347 ntBASIC1.35□□□□□ -2.19
FOXF1Q12946 AC082650.1-201ENST00000503542 575 ntTSL 4 BASIC1.35□□□□□ -2.19
FOXF1Q12946 GYPA-209ENST00000512789 258 ntTSL 1 (best) BASIC1.35□□□□□ -2.19
FOXF1Q12946 PCAT4-202ENST00000514836 373 ntTSL 3 BASIC1.35□□□□□ -2.19
FOXF1Q12946 Y_RNA.675-201ENST00000516389 149 ntBASIC1.35□□□□□ -2.19
FOXF1Q12946 RNU6-1183P-201ENST00000517054 60 ntBASIC1.35□□□□□ -2.19
FOXF1Q12946 SNORA31.24-201ENST00000517232 57 ntBASIC1.35□□□□□ -2.19
FOXF1Q12946 AC013828.2-201ENST00000532487 235 ntBASIC1.35□□□□□ -2.19
FOXF1Q12946 AC022880.1-201ENST00000534017 973 ntBASIC1.35□□□□□ -2.19
FOXF1Q12946 AC008147.1-201ENST00000551284 325 ntTSL 3 BASIC1.35□□□□□ -2.19
Retrieved 100 of 98,524 protein–RNA pairs in 80.9 ms