Protein–RNA interactions for Protein: Q12864

CDH17, Cadherin-17, humanhuman

Predictions only

Length 832 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH17Q12864 AC008163.1-205ENST00000413944 4649 ntTSL 1 (best) BASIC1.89□□□□□ -2.11
CDH17Q12864 SLCO1B3-202ENST00000381545 2805 ntAPPRIS P1 TSL 2 BASIC1.89□□□□□ -2.11
CDH17Q12864 CCDC82-202ENST00000423339 1878 ntAPPRIS P2 TSL 1 (best) BASIC1.89□□□□□ -2.11
CDH17Q12864 RNU5E-6P-201ENST00000365574 115 ntBASIC1.89□□□□□ -2.11
CDH17Q12864 Z98749.2-208ENST00000381646 500 ntBASIC1.89□□□□□ -2.11
CDH17Q12864 OR51A5P-201ENST00000415429 942 ntBASIC1.89□□□□□ -2.11
CDH17Q12864 AL645937.4-201ENST00000419702 389 ntTSL 2 BASIC1.89□□□□□ -2.11
CDH17Q12864 TRIM60P10Y-201ENST00000425589 751 ntBASIC1.89□□□□□ -2.11
CDH17Q12864 AC007285.2-201ENST00000433088 518 ntTSL 3 BASIC1.89□□□□□ -2.11
CDH17Q12864 AL157937.1-201ENST00000435092 443 ntTSL 3 BASIC1.89□□□□□ -2.11
CDH17Q12864 HMGB3P12-201ENST00000438745 556 ntBASIC1.89□□□□□ -2.11
CDH17Q12864 AC118469.1-201ENST00000442943 488 ntBASIC1.89□□□□□ -2.11
CDH17Q12864 AL353148.1-201ENST00000449761 463 ntTSL 2 BASIC1.89□□□□□ -2.11
CDH17Q12864 AC092001.1-201ENST00000453012 261 ntBASIC1.89□□□□□ -2.11
CDH17Q12864 PMCHL2-203ENST00000457791 237 ntBASIC1.89□□□□□ -2.11
CDH17Q12864 SNORD97-201ENST00000459187 142 ntBASIC1.89□□□□□ -2.11
CDH17Q12864 AC018437.1-201ENST00000492214 406 ntBASIC1.89□□□□□ -2.11
CDH17Q12864 RN7SL274P-201ENST00000492268 272 ntBASIC1.89□□□□□ -2.11
CDH17Q12864 AC091917.1-201ENST00000506330 566 ntTSL 4 BASIC1.89□□□□□ -2.11
CDH17Q12864 AC093730.1-201ENST00000508825 448 ntTSL 3 BASIC1.89□□□□□ -2.11
CDH17Q12864 RNU6-581P-201ENST00000516214 105 ntBASIC1.89□□□□□ -2.11
CDH17Q12864 RNU6-678P-201ENST00000516832 109 ntBASIC1.89□□□□□ -2.11
CDH17Q12864 RNU6-1183P-201ENST00000517054 60 ntBASIC1.89□□□□□ -2.11
CDH17Q12864 AC009902.1-201ENST00000519351 183 ntBASIC1.89□□□□□ -2.11
CDH17Q12864 AC022616.6-201ENST00000520479 119 ntBASIC1.89□□□□□ -2.11
CDH17Q12864 AC106038.1-203ENST00000522132 362 ntTSL 2 BASIC1.89□□□□□ -2.11
CDH17Q12864 AC084851.1-201ENST00000529105 249 ntBASIC1.89□□□□□ -2.11
CDH17Q12864 AC093012.1-203ENST00000548437 450 ntTSL 2 BASIC1.89□□□□□ -2.11
CDH17Q12864 ZNF519P3-201ENST00000557158 1032 ntBASIC1.89□□□□□ -2.11
CDH17Q12864 AC091544.5-202ENST00000568297 374 ntTSL 3 BASIC1.89□□□□□ -2.11
CDH17Q12864 AC012435.1-202ENST00000568772 240 ntBASIC1.89□□□□□ -2.11
CDH17Q12864 AC036222.2-201ENST00000579033 333 ntTSL 3 BASIC1.89□□□□□ -2.11
CDH17Q12864 AP001981.2-201ENST00000603241 418 ntBASIC1.89□□□□□ -2.11
CDH17Q12864 BNIP3P9-201ENST00000603714 553 ntBASIC1.89□□□□□ -2.11
CDH17Q12864 AL627230.6-201ENST00000611129 280 ntBASIC1.89□□□□□ -2.11
CDH17Q12864 AL365204.3-201ENST00000612448 685 ntBASIC1.89□□□□□ -2.11
CDH17Q12864 AC006338.1-201ENST00000618453 749 ntBASIC1.89□□□□□ -2.11
CDH17Q12864 AC091953.2-201ENST00000623979 160 ntBASIC1.89□□□□□ -2.11
CDH17Q12864 AL591030.1-201ENST00000626131 627 ntTSL 3 BASIC1.89□□□□□ -2.11
CDH17Q12864 Z99571.1-201ENST00000636677 394 ntBASIC1.89□□□□□ -2.11
CDH17Q12864 PARPBP-201ENST00000327680 3014 ntAPPRIS P1 TSL 2 BASIC1.89□□□□□ -2.11
CDH17Q12864 AL354685.2-201ENST00000448218 1447 ntBASIC1.89□□□□□ -2.11
CDH17Q12864 AC092104.1-201ENST00000497346 1441 ntBASIC1.89□□□□□ -2.11
CDH17Q12864 SCOC-201ENST00000338517 1864 ntTSL 4 BASIC1.88□□□□□ -2.11
CDH17Q12864 AC008555.8-201ENST00000623602 2168 ntBASIC1.88□□□□□ -2.11
CDH17Q12864 RNU6-500P-201ENST00000362349 107 ntBASIC1.88□□□□□ -2.11
CDH17Q12864 RNU6-1159P-201ENST00000362933 107 ntBASIC1.88□□□□□ -2.11
CDH17Q12864 AC019129.1-201ENST00000403786 261 ntBASIC1.88□□□□□ -2.11
CDH17Q12864 AL512604.1-201ENST00000404812 257 ntBASIC1.88□□□□□ -2.11
CDH17Q12864 AC005062.1-207ENST00000418442 587 ntTSL 3 BASIC1.88□□□□□ -2.11
CDH17Q12864 AL356124.2-201ENST00000442449 391 ntTSL 5 BASIC1.88□□□□□ -2.11
CDH17Q12864 BRK1P2-201ENST00000442875 223 ntBASIC1.88□□□□□ -2.11
CDH17Q12864 FABP5P13-201ENST00000452144 328 ntBASIC1.88□□□□□ -2.11
CDH17Q12864 AC117503.1-201ENST00000472241 394 ntBASIC1.88□□□□□ -2.11
CDH17Q12864 AC126768.3-201ENST00000514519 560 ntTSL 4 BASIC1.88□□□□□ -2.11
CDH17Q12864 RNU2-44P-201ENST00000516795 194 ntBASIC1.88□□□□□ -2.11
CDH17Q12864 RNA5SP137-201ENST00000516833 135 ntBASIC1.88□□□□□ -2.11
CDH17Q12864 AC020661.3-201ENST00000558101 414 ntTSL 3 BASIC1.88□□□□□ -2.11
CDH17Q12864 AC084756.1-201ENST00000558237 606 ntTSL 5 BASIC1.88□□□□□ -2.11
CDH17Q12864 ZNRD1-AS1_3.8-201ENST00000611686 104 ntBASIC1.88□□□□□ -2.11
CDH17Q12864 SOX2OT_exon1.1-201ENST00000614902 232 ntBASIC1.88□□□□□ -2.11
CDH17Q12864 GPR171-203ENST00000617554 960 ntAPPRIS P1 BASIC1.88□□□□□ -2.11
CDH17Q12864 AL512643.1-201ENST00000635735 524 ntBASIC1.88□□□□□ -2.11
CDH17Q12864 U6.99-201ENST00000637524 83 ntBASIC1.88□□□□□ -2.11
CDH17Q12864 MTND5P42-201ENST00000637720 498 ntBASIC1.88□□□□□ -2.11
CDH17Q12864 NEDD1-204ENST00000457368 3162 ntTSL 2 BASIC1.88□□□□□ -2.11
CDH17Q12864 KLRA1P-202ENST00000510134 1410 ntTSL 5 BASIC1.88□□□□□ -2.11
CDH17Q12864 ANKAR-201ENST00000313581 4391 ntAPPRIS P1 TSL 1 (best) BASIC1.87□□□□□ -2.11
CDH17Q12864 AL445523.1-201ENST00000451184 1362 ntBASIC1.87□□□□□ -2.11
CDH17Q12864 MT-ND2-201ENST00000361453 1042 ntAPPRIS P1 BASIC1.87□□□□□ -2.11
CDH17Q12864 SNORA16.1-201ENST00000364597 132 ntBASIC1.87□□□□□ -2.11
CDH17Q12864 GSTA3-202ENST00000370968 775 ntTSL 1 (best) BASIC1.87□□□□□ -2.11
CDH17Q12864 Y_RNA.534-201ENST00000384599 112 ntBASIC1.87□□□□□ -2.11
CDH17Q12864 SNORD115.1-201ENST00000391109 76 ntBASIC1.87□□□□□ -2.11
CDH17Q12864 AL079342.1-201ENST00000401460 267 ntBASIC1.87□□□□□ -2.11
CDH17Q12864 AC092809.3-201ENST00000415453 231 ntBASIC1.87□□□□□ -2.11
CDH17Q12864 AL138737.1-202ENST00000418834 876 ntTSL 3 BASIC1.87□□□□□ -2.11
CDH17Q12864 RPL7P34-201ENST00000433316 712 ntBASIC1.87□□□□□ -2.11
CDH17Q12864 AL121890.1-201ENST00000435457 205 ntBASIC1.87□□□□□ -2.11
CDH17Q12864 RPL22P17-201ENST00000438729 315 ntBASIC1.87□□□□□ -2.11
CDH17Q12864 AC010095.1-201ENST00000443543 144 ntBASIC1.87□□□□□ -2.11
CDH17Q12864 DPP10-AS2-201ENST00000446992 624 ntTSL 5 BASIC1.87□□□□□ -2.11
CDH17Q12864 RNU6-953P-201ENST00000459154 107 ntBASIC1.87□□□□□ -2.11
CDH17Q12864 AC068587.2-201ENST00000478386 781 ntBASIC1.87□□□□□ -2.11
CDH17Q12864 AC007182.2-201ENST00000489251 402 ntBASIC1.87□□□□□ -2.11
CDH17Q12864 HMGB3P17-201ENST00000504195 649 ntBASIC1.87□□□□□ -2.11
CDH17Q12864 AC107393.1-201ENST00000512403 346 ntBASIC1.87□□□□□ -2.11
CDH17Q12864 RN7SKP265-201ENST00000516448 223 ntBASIC1.87□□□□□ -2.11
CDH17Q12864 RNU6-143P-201ENST00000516942 93 ntBASIC1.87□□□□□ -2.11
CDH17Q12864 HDAC2-AS2-206ENST00000517965 850 ntTSL 3 BASIC1.87□□□□□ -2.11
CDH17Q12864 AC103993.1-201ENST00000521500 1584 ntTSL 5 BASIC1.87□□□□□ -2.11
CDH17Q12864 MTND4LP18-201ENST00000526864 291 ntBASIC1.87□□□□□ -2.11
CDH17Q12864 AC007375.1-201ENST00000554513 578 ntBASIC1.87□□□□□ -2.11
CDH17Q12864 AC012213.3-201ENST00000577199 777 ntBASIC1.87□□□□□ -2.11
CDH17Q12864 AC023394.2-201ENST00000581987 792 ntTSL 5 BASIC1.87□□□□□ -2.11
CDH17Q12864 AL096840.1-201ENST00000603287 93 ntBASIC1.87□□□□□ -2.11
CDH17Q12864 AC121334.2-201ENST00000605387 271 ntBASIC1.87□□□□□ -2.11
CDH17Q12864 ZNRD1-AS1_2.5-201ENST00000614729 76 ntBASIC1.87□□□□□ -2.11
CDH17Q12864 AC104010.1-201ENST00000616889 150 ntBASIC1.87□□□□□ -2.11
CDH17Q12864 FSIP2-202ENST00000424728 20788 ntAPPRIS P2 TSL 5 BASIC1.87□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 111.1 ms