Protein–RNA interactions for Protein: Q08945

SSRP1, FACT complex subunit SSRP1, humanhuman

Known RBP Predictions only

Length 709 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSRP1Q08945 RNU6-72P-201ENST00000384285 79 ntBASIC4.12□□□□□ -1.75
SSRP1Q08945 RNU6-325P-201ENST00000411132 105 ntBASIC4.12□□□□□ -1.75
SSRP1Q08945 RNA5SP31-201ENST00000411144 127 ntBASIC4.12□□□□□ -1.75
SSRP1Q08945 SYF2P2-201ENST00000417620 583 ntBASIC4.12□□□□□ -1.75
SSRP1Q08945 AL117339.3-201ENST00000418733 162 ntBASIC4.12□□□□□ -1.75
SSRP1Q08945 DBIP2-201ENST00000419076 262 ntBASIC4.12□□□□□ -1.75
SSRP1Q08945 RPS15AP10-201ENST00000432472 382 ntBASIC4.12□□□□□ -1.75
SSRP1Q08945 AL024508.1-201ENST00000432477 505 ntTSL 2 BASIC4.12□□□□□ -1.75
SSRP1Q08945 SNRPEP4-201ENST00000435815 279 ntBASIC4.12□□□□□ -1.75
SSRP1Q08945 RPS29P31-201ENST00000446147 164 ntBASIC4.12□□□□□ -1.75
SSRP1Q08945 AL590664.1-201ENST00000448065 339 ntBASIC4.12□□□□□ -1.75
SSRP1Q08945 SNORD105B-201ENST00000458770 79 ntBASIC4.12□□□□□ -1.75
SSRP1Q08945 SNORA67.7-201ENST00000516664 135 ntBASIC4.12□□□□□ -1.75
SSRP1Q08945 AC011477.3-201ENST00000585571 403 ntTSL 5 BASIC4.12□□□□□ -1.75
SSRP1Q08945 SNRPGP17-201ENST00000603780 214 ntBASIC4.12□□□□□ -1.75
SSRP1Q08945 AC006133.1-201ENST00000617106 264 ntBASIC4.12□□□□□ -1.75
SSRP1Q08945 AF117829.1-206ENST00000621883 3802 ntBASIC4.12□□□□□ -1.75
SSRP1Q08945 OR4C16-201ENST00000623907 933 ntAPPRIS P1 BASIC4.12□□□□□ -1.75
SSRP1Q08945 AC068647.1-201ENST00000489539 2265 ntBASIC4.12□□□□□ -1.75
SSRP1Q08945 AGTR1-206ENST00000474935 1795 ntAPPRIS P1 TSL 3 BASIC4.12□□□□□ -1.75
SSRP1Q08945 USP26-201ENST00000370832 3642 ntAPPRIS P1 BASIC4.12□□□□□ -1.75
SSRP1Q08945 Y_RNA.132-201ENST00000363421 102 ntBASIC4.11□□□□□ -1.75
SSRP1Q08945 RNU6-270P-201ENST00000364131 105 ntBASIC4.11□□□□□ -1.75
SSRP1Q08945 RNU6-827P-201ENST00000365553 106 ntBASIC4.11□□□□□ -1.75
SSRP1Q08945 Z98749.2-208ENST00000381646 500 ntBASIC4.11□□□□□ -1.75
SSRP1Q08945 RNU6-1040P-201ENST00000383974 107 ntBASIC4.11□□□□□ -1.75
SSRP1Q08945 Y_RNA.404-201ENST00000383978 102 ntBASIC4.11□□□□□ -1.75
SSRP1Q08945 RNU6-890P-201ENST00000384121 107 ntBASIC4.11□□□□□ -1.75
SSRP1Q08945 RNU6-933P-201ENST00000384424 107 ntBASIC4.11□□□□□ -1.75
SSRP1Q08945 RNU6-790P-201ENST00000384479 105 ntBASIC4.11□□□□□ -1.75
SSRP1Q08945 MIR554-201ENST00000384874 96 ntBASIC4.11□□□□□ -1.75
SSRP1Q08945 RNA5SP171-201ENST00000391071 115 ntBASIC4.11□□□□□ -1.75
SSRP1Q08945 NDUFS5P4-201ENST00000412983 318 ntBASIC4.11□□□□□ -1.75
SSRP1Q08945 AL590705.3-201ENST00000416066 474 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
SSRP1Q08945 AC099548.1-201ENST00000421443 426 ntBASIC4.11□□□□□ -1.75
SSRP1Q08945 AC002075.2-201ENST00000425207 252 ntBASIC4.11□□□□□ -1.75
SSRP1Q08945 USMG5P1-201ENST00000425964 177 ntBASIC4.11□□□□□ -1.75
SSRP1Q08945 Z82205.1-201ENST00000428456 297 ntBASIC4.11□□□□□ -1.75
SSRP1Q08945 KCNMA1-AS2-201ENST00000428936 427 ntTSL 3 BASIC4.11□□□□□ -1.75
SSRP1Q08945 C21orf91-OT1-202ENST00000430815 717 ntTSL 5 BASIC4.11□□□□□ -1.75
SSRP1Q08945 AL133396.1-201ENST00000432048 687 ntBASIC4.11□□□□□ -1.75
SSRP1Q08945 AL390067.1-201ENST00000440009 420 ntTSL 3 BASIC4.11□□□□□ -1.75
SSRP1Q08945 AL357873.1-201ENST00000449215 282 ntTSL 3 BASIC4.11□□□□□ -1.75
SSRP1Q08945 AL353148.1-201ENST00000449761 463 ntTSL 2 BASIC4.11□□□□□ -1.75
SSRP1Q08945 GAS5-221ENST00000450589 632 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
SSRP1Q08945 snoU109.2-201ENST00000459316 135 ntBASIC4.11□□□□□ -1.75
SSRP1Q08945 RN7SL542P-201ENST00000467147 294 ntBASIC4.11□□□□□ -1.75
SSRP1Q08945 RPL32P34-201ENST00000486380 400 ntBASIC4.11□□□□□ -1.75
SSRP1Q08945 AP006245.1-201ENST00000522549 120 ntBASIC4.11□□□□□ -1.75
SSRP1Q08945 LINC00933-203ENST00000559812 219 ntBASIC4.11□□□□□ -1.75
SSRP1Q08945 AC091043.1-201ENST00000579830 453 ntTSL 3 BASIC4.11□□□□□ -1.75
SSRP1Q08945 TTN-AS1-212ENST00000582847 1036 ntTSL 5 BASIC4.11□□□□□ -1.75
SSRP1Q08945 AC078795.3-201ENST00000602913 472 ntBASIC4.11□□□□□ -1.75
SSRP1Q08945 uc_338.32-201ENST00000615087 172 ntBASIC4.11□□□□□ -1.75
SSRP1Q08945 U4.6-201ENST00000621618 127 ntBASIC4.11□□□□□ -1.75
SSRP1Q08945 CR392039.5-201ENST00000623201 510 ntBASIC4.11□□□□□ -1.75
SSRP1Q08945 AC073308.1-201ENST00000623696 305 ntBASIC4.11□□□□□ -1.75
SSRP1Q08945 UBE2E2-207ENST00000628311 267 ntTSL 5 BASIC4.11□□□□□ -1.75
SSRP1Q08945 PTPN22-211ENST00000538253 3575 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
SSRP1Q08945 NUFIP2-201ENST00000225388 10850 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
SSRP1Q08945 LRIF1-203ENST00000494675 1912 ntAPPRIS ALT2 TSL 2 BASIC4.11□□□□□ -1.75
SSRP1Q08945 EPC1-203ENST00000375110 3909 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
SSRP1Q08945 OR5K1-202ENST00000642057 3466 ntAPPRIS P1 BASIC4.11□□□□□ -1.75
SSRP1Q08945 TMEM38B-201ENST00000374688 3956 ntTSL 2 BASIC4.11□□□□□ -1.75
SSRP1Q08945 ATP2B1-203ENST00000393164 3127 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
SSRP1Q08945 STEAP4-202ENST00000380079 9988 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
SSRP1Q08945 KCNJ16-203ENST00000392671 3981 ntAPPRIS P1 TSL 2 BASIC4.1□□□□□ -1.75
SSRP1Q08945 SNORA62.3-201ENST00000365110 153 ntBASIC4.1□□□□□ -1.75
SSRP1Q08945 RNU5E-7P-201ENST00000365290 117 ntBASIC4.1□□□□□ -1.75
SSRP1Q08945 SNORA5A-201ENST00000384111 134 ntBASIC4.1□□□□□ -1.75
SSRP1Q08945 SNORA75.6-201ENST00000391318 127 ntBASIC4.1□□□□□ -1.75
SSRP1Q08945 U3.37-201ENST00000408528 213 ntBASIC4.1□□□□□ -1.75
SSRP1Q08945 RN7SL594P-201ENST00000470590 287 ntBASIC4.1□□□□□ -1.75
SSRP1Q08945 RPL30P14-201ENST00000482744 348 ntBASIC4.1□□□□□ -1.75
SSRP1Q08945 ODF2L-216ENST00000486215 311 ntTSL 2 BASIC4.1□□□□□ -1.75
SSRP1Q08945 AC096576.1-201ENST00000489014 359 ntBASIC4.1□□□□□ -1.75
SSRP1Q08945 AC090096.1-201ENST00000489168 390 ntBASIC4.1□□□□□ -1.75
SSRP1Q08945 AC104619.4-201ENST00000510773 249 ntBASIC4.1□□□□□ -1.75
SSRP1Q08945 HTN3-202ENST00000526767 578 ntAPPRIS P2 TSL 1 (best) BASIC4.1□□□□□ -1.75
SSRP1Q08945 ELOCP31-201ENST00000540463 467 ntBASIC4.1□□□□□ -1.75
SSRP1Q08945 AC026333.2-201ENST00000542164 106 ntBASIC4.1□□□□□ -1.75
SSRP1Q08945 SNRPGP18-201ENST00000553000 214 ntBASIC4.1□□□□□ -1.75
SSRP1Q08945 MIR3158-1-201ENST00000583596 81 ntBASIC4.1□□□□□ -1.75
SSRP1Q08945 AC009314.1-201ENST00000603871 304 ntBASIC4.1□□□□□ -1.75
SSRP1Q08945 AC005034.5-201ENST00000604219 466 ntBASIC4.1□□□□□ -1.75
SSRP1Q08945 HSPE1P7-201ENST00000604681 321 ntBASIC4.1□□□□□ -1.75
SSRP1Q08945 MSANTD4-206ENST00000617528 508 ntTSL 5 BASIC4.1□□□□□ -1.75
SSRP1Q08945 MUC15-205ENST00000529533 2084 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
SSRP1Q08945 ERBIN-212ENST00000508515 4374 ntTSL 5 BASIC4.1□□□□□ -1.75
SSRP1Q08945 AP001486.2-201ENST00000561652 5113 ntBASIC4.09□□□□□ -1.75
SSRP1Q08945 Y_RNA.2-201ENST00000362330 96 ntBASIC4.09□□□□□ -1.75
SSRP1Q08945 RNU6-1059P-201ENST00000363752 98 ntBASIC4.09□□□□□ -1.75
SSRP1Q08945 MIR670-201ENST00000390142 98 ntBASIC4.09□□□□□ -1.75
SSRP1Q08945 MIR1183-201ENST00000408856 89 ntBASIC4.09□□□□□ -1.75
SSRP1Q08945 AC239803.1-203ENST00000411978 452 ntTSL 2 BASIC4.09□□□□□ -1.75
SSRP1Q08945 FTH1P25-201ENST00000447665 469 ntBASIC4.09□□□□□ -1.75
SSRP1Q08945 AC013470.1-201ENST00000453438 462 ntBASIC4.09□□□□□ -1.75
SSRP1Q08945 BTF3P15-201ENST00000455606 336 ntBASIC4.09□□□□□ -1.75
SSRP1Q08945 MIR2053-201ENST00000459295 91 ntBASIC4.09□□□□□ -1.75
SSRP1Q08945 AC128713.1-201ENST00000471495 306 ntBASIC4.09□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 102.9 ms