Protein–RNA interactions for Protein: Q00444

HOXC5, Homeobox protein Hox-C5, humanhuman

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC5Q00444 AC244093.3-201ENST00000615419 411 ntTSL 3 BASIC1.28□□□□□ -2.2
HOXC5Q00444 DLEU2_6.2-201ENST00000620994 136 ntBASIC1.28□□□□□ -2.2
HOXC5Q00444 FGF7-202ENST00000560270 1688 ntTSL 1 (best) BASIC1.28□□□□□ -2.2
HOXC5Q00444 MIR126-201ENST00000362291 85 ntBASIC1.27□□□□□ -2.21
HOXC5Q00444 Y_RNA.311-201ENST00000365068 96 ntBASIC1.27□□□□□ -2.21
HOXC5Q00444 RNU6-14P-201ENST00000384630 106 ntBASIC1.27□□□□□ -2.21
HOXC5Q00444 MIR597-201ENST00000384968 97 ntBASIC1.27□□□□□ -2.21
HOXC5Q00444 MIR1283-2-201ENST00000408621 87 ntBASIC1.27□□□□□ -2.21
HOXC5Q00444 RNU2-72P-201ENST00000411175 163 ntBASIC1.27□□□□□ -2.21
HOXC5Q00444 AP000432.1-201ENST00000416641 516 ntTSL 3 BASIC1.27□□□□□ -2.21
HOXC5Q00444 AC007098.1-201ENST00000420122 367 ntBASIC1.27□□□□□ -2.21
HOXC5Q00444 AC008267.5-201ENST00000424928 265 ntBASIC1.27□□□□□ -2.21
HOXC5Q00444 MTCO3P46-201ENST00000425787 232 ntBASIC1.27□□□□□ -2.21
HOXC5Q00444 USP9YP11-201ENST00000427537 717 ntBASIC1.27□□□□□ -2.21
HOXC5Q00444 AL591806.2-201ENST00000433122 173 ntBASIC1.27□□□□□ -2.21
HOXC5Q00444 RPS25P9-201ENST00000435591 252 ntBASIC1.27□□□□□ -2.21
HOXC5Q00444 HMGB1P18-201ENST00000438801 619 ntBASIC1.27□□□□□ -2.21
HOXC5Q00444 AL117351.1-201ENST00000438864 766 ntBASIC1.27□□□□□ -2.21
HOXC5Q00444 MTCO1P27-201ENST00000448269 226 ntBASIC1.27□□□□□ -2.21
HOXC5Q00444 GJE1-201ENST00000450456 916 ntAPPRIS P1 TSL 5 BASIC1.27□□□□□ -2.21
HOXC5Q00444 HMGN2P23-201ENST00000456759 269 ntBASIC1.27□□□□□ -2.21
HOXC5Q00444 AC027575.1-201ENST00000481064 460 ntBASIC1.27□□□□□ -2.21
HOXC5Q00444 AC021146.8-201ENST00000507455 733 ntBASIC1.27□□□□□ -2.21
HOXC5Q00444 AC092138.2-201ENST00000563811 428 ntTSL 5 BASIC1.27□□□□□ -2.21
HOXC5Q00444 BNIP3P26-201ENST00000600827 554 ntBASIC1.27□□□□□ -2.21
HOXC5Q00444 AC018638.7-201ENST00000605836 1114 ntBASIC1.27□□□□□ -2.21
HOXC5Q00444 AP000943.4-201ENST00000622912 357 ntBASIC1.27□□□□□ -2.21
HOXC5Q00444 AC092192.1-201ENST00000633154 1018 ntBASIC1.27□□□□□ -2.21
HOXC5Q00444 AL512643.1-201ENST00000635735 524 ntBASIC1.27□□□□□ -2.21
HOXC5Q00444 AC092125.1-201ENST00000562568 1995 ntBASIC1.27□□□□□ -2.21
HOXC5Q00444 MIPOL1-203ENST00000537471 5954 ntAPPRIS P1 TSL 5 BASIC1.26□□□□□ -2.21
HOXC5Q00444 LIPJ-201ENST00000371939 1484 ntAPPRIS P1 TSL 1 (best) BASIC1.26□□□□□ -2.21
HOXC5Q00444 AC138393.1-203ENST00000327086 343 ntBASIC1.26□□□□□ -2.21
HOXC5Q00444 RNU6-858P-201ENST00000362436 107 ntBASIC1.26□□□□□ -2.21
HOXC5Q00444 RNU6-457P-201ENST00000363999 107 ntBASIC1.26□□□□□ -2.21
HOXC5Q00444 Y_RNA.472-201ENST00000384322 102 ntBASIC1.26□□□□□ -2.21
HOXC5Q00444 MIR518D-201ENST00000385014 87 ntBASIC1.26□□□□□ -2.21
HOXC5Q00444 SNORA40.19-201ENST00000390846 128 ntBASIC1.26□□□□□ -2.21
HOXC5Q00444 FTH1P15-201ENST00000406984 280 ntBASIC1.26□□□□□ -2.21
HOXC5Q00444 AC069282.1-201ENST00000411911 526 ntBASIC1.26□□□□□ -2.21
HOXC5Q00444 LINC00428-201ENST00000415620 227 ntTSL 5 BASIC1.26□□□□□ -2.21
HOXC5Q00444 EDNRB-AS1-201ENST00000422405 601 ntTSL 5 BASIC1.26□□□□□ -2.21
HOXC5Q00444 AC025038.1-201ENST00000433249 336 ntTSL 3 BASIC1.26□□□□□ -2.21
HOXC5Q00444 NEFMP1-201ENST00000443423 1006 ntBASIC1.26□□□□□ -2.21
HOXC5Q00444 SPIN4-AS1-201ENST00000451979 426 ntTSL 2 BASIC1.26□□□□□ -2.21
HOXC5Q00444 RPL7P43-201ENST00000478876 753 ntBASIC1.26□□□□□ -2.21
HOXC5Q00444 LEKR1-206ENST00000483177 546 ntTSL 3 BASIC1.26□□□□□ -2.21
HOXC5Q00444 AC108729.1-201ENST00000487812 947 ntBASIC1.26□□□□□ -2.21
HOXC5Q00444 MTCYBP43-201ENST00000513621 740 ntBASIC1.26□□□□□ -2.21
HOXC5Q00444 RNU6-586P-201ENST00000517265 104 ntBASIC1.26□□□□□ -2.21
HOXC5Q00444 AC010183.2-202ENST00000546791 382 ntTSL 3 BASIC1.26□□□□□ -2.21
HOXC5Q00444 AL118556.1-201ENST00000555257 502 ntTSL 2 BASIC1.26□□□□□ -2.21
HOXC5Q00444 MIR4713-201ENST00000582691 75 ntBASIC1.26□□□□□ -2.21
HOXC5Q00444 AC113137.1-201ENST00000591869 558 ntTSL 4 BASIC1.26□□□□□ -2.21
HOXC5Q00444 AC093788.1-201ENST00000609356 927 ntBASIC1.26□□□□□ -2.21
HOXC5Q00444 AC084824.5-201ENST00000612009 413 ntBASIC1.26□□□□□ -2.21
HOXC5Q00444 AL807742.1-203ENST00000637444 759 ntTSL 5 BASIC1.26□□□□□ -2.21
HOXC5Q00444 SERPINI2-209ENST00000616363 1769 ntTSL 5 BASIC1.26□□□□□ -2.21
HOXC5Q00444 TMEM161B-210ENST00000511218 1351 ntTSL 2 BASIC1.25□□□□□ -2.21
HOXC5Q00444 RNU5E-1-201ENST00000362477 120 ntBASIC1.25□□□□□ -2.21
HOXC5Q00444 U8.1-201ENST00000362843 134 ntBASIC1.25□□□□□ -2.21
HOXC5Q00444 SNORA17.3-201ENST00000391159 129 ntBASIC1.25□□□□□ -2.21
HOXC5Q00444 FCF1P10-201ENST00000407590 479 ntBASIC1.25□□□□□ -2.21
HOXC5Q00444 AC138623.1-201ENST00000418060 216 ntBASIC1.25□□□□□ -2.21
HOXC5Q00444 AC083875.1-201ENST00000419509 405 ntBASIC1.25□□□□□ -2.21
HOXC5Q00444 AL590705.2-201ENST00000420204 281 ntTSL 5 BASIC1.25□□□□□ -2.21
HOXC5Q00444 LINC00397-201ENST00000422074 344 ntTSL 3 BASIC1.25□□□□□ -2.21
HOXC5Q00444 AC035139.1-201ENST00000423256 273 ntTSL 3 BASIC1.25□□□□□ -2.21
HOXC5Q00444 AC241644.2-201ENST00000426504 480 ntTSL 3 BASIC1.25□□□□□ -2.21
HOXC5Q00444 AC244035.3-201ENST00000428399 271 ntTSL 2 BASIC1.25□□□□□ -2.21
HOXC5Q00444 MTND2P29-201ENST00000438595 412 ntBASIC1.25□□□□□ -2.21
HOXC5Q00444 AC007879.4-201ENST00000440545 361 ntTSL 3 BASIC1.25□□□□□ -2.21
HOXC5Q00444 RPS3AP22-201ENST00000488297 769 ntBASIC1.25□□□□□ -2.21
HOXC5Q00444 AC099520.1-202ENST00000503650 777 ntTSL 3 BASIC1.25□□□□□ -2.21
HOXC5Q00444 LINC02064-201ENST00000506492 470 ntTSL 5 BASIC1.25□□□□□ -2.21
HOXC5Q00444 CTD-2350J17.1-202ENST00000510456 360 ntTSL 2 BASIC1.25□□□□□ -2.21
HOXC5Q00444 HTN1-204ENST00000511674 623 ntAPPRIS P1 TSL 2 BASIC1.25□□□□□ -2.21
HOXC5Q00444 MTND2P31-201ENST00000512602 616 ntBASIC1.25□□□□□ -2.21
HOXC5Q00444 LINC01218-201ENST00000515150 481 ntTSL 3 BASIC1.25□□□□□ -2.21
HOXC5Q00444 RNU5B-3P-201ENST00000516601 115 ntBASIC1.25□□□□□ -2.21
HOXC5Q00444 RNU6-143P-201ENST00000516942 93 ntBASIC1.25□□□□□ -2.21
HOXC5Q00444 AC007991.3-201ENST00000517623 502 ntTSL 4 BASIC1.25□□□□□ -2.21
HOXC5Q00444 HMSD-204ENST00000526932 162 ntTSL 3 BASIC1.25□□□□□ -2.21
HOXC5Q00444 AP003033.1-201ENST00000527244 415 ntBASIC1.25□□□□□ -2.21
HOXC5Q00444 AP003498.1-201ENST00000532530 347 ntTSL 3 BASIC1.25□□□□□ -2.21
HOXC5Q00444 TRAV1-1-201ENST00000542354 392 ntAPPRIS P1 BASIC1.25□□□□□ -2.21
HOXC5Q00444 AL160236.1-201ENST00000556317 195 ntBASIC1.25□□□□□ -2.21
HOXC5Q00444 AC020661.3-201ENST00000558101 414 ntTSL 3 BASIC1.25□□□□□ -2.21
HOXC5Q00444 AC068338.1-201ENST00000565567 176 ntBASIC1.25□□□□□ -2.21
HOXC5Q00444 AC022254.1-201ENST00000567857 235 ntBASIC1.25□□□□□ -2.21
HOXC5Q00444 AC025678.1-201ENST00000567861 338 ntBASIC1.25□□□□□ -2.21
HOXC5Q00444 BNIP3P27-201ENST00000599991 412 ntBASIC1.25□□□□□ -2.21
HOXC5Q00444 CLIC4P2-201ENST00000601934 717 ntBASIC1.25□□□□□ -2.21
HOXC5Q00444 BNIP3P9-201ENST00000603714 553 ntBASIC1.25□□□□□ -2.21
HOXC5Q00444 AL358072.1-201ENST00000604156 575 ntBASIC1.25□□□□□ -2.21
HOXC5Q00444 AC007363.1-201ENST00000604736 620 ntBASIC1.25□□□□□ -2.21
HOXC5Q00444 AC103810.8-201ENST00000607347 118 ntBASIC1.25□□□□□ -2.21
HOXC5Q00444 AC004908.3-201ENST00000610248 625 ntBASIC1.25□□□□□ -2.21
HOXC5Q00444 LINC01206-214ENST00000610910 456 ntTSL 5 BASIC1.25□□□□□ -2.21
HOXC5Q00444 RMST_6.1-201ENST00000611980 203 ntBASIC1.25□□□□□ -2.21
Retrieved 100 of 98,524 protein–RNA pairs in 140.4 ms