Protein–RNA interactions for Protein: P62891

RPL39, 60S ribosomal protein L39, humanhuman

Known RBP Predictions only

Length 51 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPL39P62891 RPS25P9-201ENST00000435591 252 ntBASIC-0.41□□□□□ -2.48
RPL39P62891 HMGN2P34-201ENST00000437647 269 ntBASIC-0.41□□□□□ -2.48
RPL39P62891 LINC01851-201ENST00000443419 637 ntTSL 3 BASIC-0.41□□□□□ -2.48
RPL39P62891 LNCSRLR-201ENST00000490375 709 ntTSL 3 BASIC-0.41□□□□□ -2.48
RPL39P62891 SEMA6A-AS1-204ENST00000510682 521 ntTSL 5 BASIC-0.41□□□□□ -2.48
RPL39P62891 RNA5SP255-201ENST00000516370 107 ntBASIC-0.41□□□□□ -2.48
RPL39P62891 AC091944.1-201ENST00000521984 449 ntTSL 3 BASIC-0.41□□□□□ -2.48
RPL39P62891 AC087362.2-201ENST00000529325 256 ntTSL 3 BASIC-0.41□□□□□ -2.48
RPL39P62891 MDM2-232ENST00000544561 213 ntTSL 5 BASIC-0.41□□□□□ -2.48
RPL39P62891 AC125611.1-201ENST00000549563 229 ntBASIC-0.41□□□□□ -2.48
RPL39P62891 AC025423.5-201ENST00000550230 219 ntBASIC-0.41□□□□□ -2.48
RPL39P62891 AC073111.2-201ENST00000605657 1075 ntBASIC-0.41□□□□□ -2.48
RPL39P62891 AL359314.1-201ENST00000616913 261 ntBASIC-0.41□□□□□ -2.48
RPL39P62891 LINC01068-202ENST00000620874 626 ntTSL 3 BASIC-0.41□□□□□ -2.48
RPL39P62891 AC106730.3-201ENST00000624568 641 ntBASIC-0.41□□□□□ -2.48
RPL39P62891 AC097372.4-201ENST00000625025 466 ntBASIC-0.41□□□□□ -2.48
RPL39P62891 Y_RNA.116-201ENST00000363292 103 ntBASIC-0.42□□□□□ -2.48
RPL39P62891 SNORA42.1-201ENST00000363515 137 ntBASIC-0.42□□□□□ -2.48
RPL39P62891 SNORD114-9-201ENST00000364370 72 ntBASIC-0.42□□□□□ -2.48
RPL39P62891 RNU6-1065P-201ENST00000384513 106 ntBASIC-0.42□□□□□ -2.48
RPL39P62891 RNY1P4-201ENST00000384595 115 ntBASIC-0.42□□□□□ -2.48
RPL39P62891 Y_RNA.551-201ENST00000384661 102 ntBASIC-0.42□□□□□ -2.48
RPL39P62891 AC010789.1-201ENST00000458489 291 ntTSL 5 BASIC-0.42□□□□□ -2.48
RPL39P62891 snoU13.18-201ENST00000459483 104 ntBASIC-0.42□□□□□ -2.48
RPL39P62891 AC082650.1-201ENST00000503542 575 ntTSL 4 BASIC-0.42□□□□□ -2.48
RPL39P62891 AC108078.1-201ENST00000508073 725 ntBASIC-0.42□□□□□ -2.48
RPL39P62891 AC124854.1-202ENST00000513779 339 ntTSL 3 BASIC-0.42□□□□□ -2.48
RPL39P62891 SNORA31.6-201ENST00000516241 130 ntBASIC-0.42□□□□□ -2.48
RPL39P62891 LINC02442-201ENST00000537732 343 ntTSL 3 BASIC-0.42□□□□□ -2.48
RPL39P62891 AL512310.8-201ENST00000550183 120 ntBASIC-0.42□□□□□ -2.48
RPL39P62891 MIR4305-201ENST00000583252 102 ntBASIC-0.42□□□□□ -2.48
RPL39P62891 GAS5-AS1-201ENST00000602767 694 ntBASIC-0.42□□□□□ -2.48
RPL39P62891 AC090578.1-201ENST00000604955 591 ntBASIC-0.42□□□□□ -2.48
RPL39P62891 AC096586.2-201ENST00000610260 441 ntBASIC-0.42□□□□□ -2.48
RPL39P62891 AC073569.3-201ENST00000619055 682 ntBASIC-0.42□□□□□ -2.48
RPL39P62891 MIR4315-1-201ENST00000636800 73 ntBASIC-0.42□□□□□ -2.48
RPL39P62891 MIR4315-2-201ENST00000640925 73 ntBASIC-0.42□□□□□ -2.48
RPL39P62891 RNU4-48P-201ENST00000365559 182 ntBASIC-0.43□□□□□ -2.48
RPL39P62891 RNU6-342P-201ENST00000384521 104 ntBASIC-0.43□□□□□ -2.48
RPL39P62891 TATDN1P1-201ENST00000414123 891 ntBASIC-0.43□□□□□ -2.48
RPL39P62891 AC113331.1-201ENST00000428160 869 ntTSL 2 BASIC-0.43□□□□□ -2.48
RPL39P62891 ZFAND6P1-201ENST00000434138 605 ntBASIC-0.43□□□□□ -2.48
RPL39P62891 UBE2V1P5-201ENST00000440070 405 ntBASIC-0.43□□□□□ -2.48
RPL39P62891 AL589935.1-212ENST00000450998 525 ntTSL 2 BASIC-0.43□□□□□ -2.48
RPL39P62891 AC074344.1-201ENST00000512823 224 ntBASIC-0.43□□□□□ -2.48
RPL39P62891 SNORA48.9-201ENST00000516419 162 ntBASIC-0.43□□□□□ -2.48
RPL39P62891 POC1B-211ENST00000549504 581 ntTSL 5 BASIC-0.43□□□□□ -2.48
RPL39P62891 EIF4A1P12-201ENST00000551910 141 ntBASIC-0.43□□□□□ -2.48
RPL39P62891 KC877982.1-201ENST00000602313 470 ntBASIC-0.43□□□□□ -2.48
RPL39P62891 ZNF654-201ENST00000309495 4957 ntAPPRIS P2 TSL 1 (best) BASIC-0.43□□□□□ -2.48
RPL39P62891 RNA5SP264-201ENST00000363115 107 ntBASIC-0.44□□□□□ -2.48
RPL39P62891 RNU6-302P-201ENST00000365249 107 ntBASIC-0.44□□□□□ -2.48
RPL39P62891 MIR193B-201ENST00000384907 83 ntBASIC-0.44□□□□□ -2.48
RPL39P62891 MIR29C-201ENST00000385231 88 ntBASIC-0.44□□□□□ -2.48
RPL39P62891 MIR320B1-201ENST00000390209 79 ntBASIC-0.44□□□□□ -2.48
RPL39P62891 AL589994.1-201ENST00000404962 340 ntBASIC-0.44□□□□□ -2.48
RPL39P62891 MIR1197-201ENST00000408818 88 ntBASIC-0.44□□□□□ -2.48
RPL39P62891 AL606489.2-201ENST00000433886 234 ntBASIC-0.44□□□□□ -2.48
RPL39P62891 AC092573.2-201ENST00000434546 243 ntBASIC-0.44□□□□□ -2.48
RPL39P62891 DDX3P2-201ENST00000446138 111 ntBASIC-0.44□□□□□ -2.48
RPL39P62891 SNORA70.22-201ENST00000517160 124 ntBASIC-0.44□□□□□ -2.48
RPL39P62891 AC100801.1-201ENST00000517368 517 ntTSL 3 BASIC-0.44□□□□□ -2.48
RPL39P62891 COPS8P3-201ENST00000526024 482 ntBASIC-0.44□□□□□ -2.48
RPL39P62891 AC092747.1-202ENST00000540595 380 ntTSL 5 BASIC-0.44□□□□□ -2.48
RPL39P62891 MIR3124-201ENST00000582636 67 ntBASIC-0.44□□□□□ -2.48
RPL39P62891 AC098614.4-201ENST00000607601 462 ntBASIC-0.44□□□□□ -2.48
RPL39P62891 AL358975.1-202ENST00000628133 589 ntTSL 5 BASIC-0.44□□□□□ -2.48
RPL39P62891 PRPSAP2-229ENST00000628609 192 ntTSL 5 BASIC-0.44□□□□□ -2.48
RPL39P62891 PPIL4-202ENST00000340881 1089 ntTSL 1 (best) BASIC-0.45□□□□□ -2.48
RPL39P62891 RNU6-1197P-201ENST00000391183 107 ntBASIC-0.45□□□□□ -2.48
RPL39P62891 MIR1287-201ENST00000408492 90 ntBASIC-0.45□□□□□ -2.48
RPL39P62891 LINC01765-201ENST00000448680 491 ntTSL 2 BASIC-0.45□□□□□ -2.48
RPL39P62891 MTND2P8-201ENST00000450555 1025 ntBASIC-0.45□□□□□ -2.48
RPL39P62891 SPIN4-AS1-201ENST00000451979 426 ntTSL 2 BASIC-0.45□□□□□ -2.48
RPL39P62891 AC108729.1-201ENST00000487812 947 ntBASIC-0.45□□□□□ -2.48
RPL39P62891 TRAPPC2P7-201ENST00000509650 231 ntBASIC-0.45□□□□□ -2.48
RPL39P62891 LINC02144-201ENST00000511417 592 ntTSL 4 BASIC-0.45□□□□□ -2.48
RPL39P62891 HTN1-204ENST00000511674 623 ntAPPRIS P1 TSL 2 BASIC-0.45□□□□□ -2.48
RPL39P62891 RN7SKP88-201ENST00000516847 250 ntBASIC-0.45□□□□□ -2.48
RPL39P62891 CA3-AS1-203ENST00000524052 430 ntTSL 2 BASIC-0.45□□□□□ -2.48
RPL39P62891 MED28P6-201ENST00000558776 231 ntBASIC-0.45□□□□□ -2.48
RPL39P62891 ITFG1-AS1-202ENST00000565694 494 ntTSL 2 BASIC-0.45□□□□□ -2.48
RPL39P62891 AC115085.1-201ENST00000588924 229 ntBASIC-0.45□□□□□ -2.48
RPL39P62891 AC019131.2-201ENST00000609071 870 ntBASIC-0.45□□□□□ -2.48
RPL39P62891 7SK.8-201ENST00000612110 250 ntBASIC-0.45□□□□□ -2.48
RPL39P62891 7SK.11-201ENST00000615477 250 ntBASIC-0.45□□□□□ -2.48
RPL39P62891 AC009233.1-201ENST00000616477 371 ntBASIC-0.45□□□□□ -2.48
RPL39P62891 7SK.13-201ENST00000622040 250 ntBASIC-0.45□□□□□ -2.48
RPL39P62891 LINC00216-201ENST00000623548 1126 ntBASIC-0.45□□□□□ -2.48
RPL39P62891 RNU6-414P-201ENST00000363705 104 ntBASIC-0.46□□□□□ -2.48
RPL39P62891 Y_RNA.393-201ENST00000383936 102 ntBASIC-0.46□□□□□ -2.48
RPL39P62891 RNU6-1035P-201ENST00000384477 107 ntBASIC-0.46□□□□□ -2.48
RPL39P62891 MIR518A1-201ENST00000385068 85 ntBASIC-0.46□□□□□ -2.48
RPL39P62891 MIR214-201ENST00000385214 110 ntBASIC-0.46□□□□□ -2.48
RPL39P62891 RPL23AP95-201ENST00000426806 265 ntBASIC-0.46□□□□□ -2.48
RPL39P62891 AC024597.1-201ENST00000442753 706 ntTSL 5 BASIC-0.46□□□□□ -2.48
RPL39P62891 AL034418.1-201ENST00000448675 860 ntBASIC-0.46□□□□□ -2.48
RPL39P62891 ANKRD62P1-PARP4P3-201ENST00000456726 1181 ntTSL 5 BASIC-0.46□□□□□ -2.48
RPL39P62891 AC093534.1-201ENST00000504977 132 ntBASIC-0.46□□□□□ -2.48
RPL39P62891 GIN1-203ENST00000508629 1040 ntTSL 1 (best) BASIC-0.46□□□□□ -2.48
Retrieved 100 of 98,524 protein–RNA pairs in 106.2 ms