Protein–RNA interactions for Protein: P62310

LSM3, U6 snRNA-associated Sm-like protein LSm3, humanhuman

Known RBP Predictions only

Length 102 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSM3P62310 AC117532.1-201ENST00000514638 323 ntBASIC0.75□□□□□ -2.29
LSM3P62310 RNA5SP404-201ENST00000517118 132 ntBASIC0.75□□□□□ -2.29
LSM3P62310 MRPS36P5-201ENST00000551909 298 ntBASIC0.75□□□□□ -2.29
LSM3P62310 CYP3A52P-201ENST00000563326 91 ntBASIC0.75□□□□□ -2.29
LSM3P62310 AC136619.2-201ENST00000563361 631 ntBASIC0.75□□□□□ -2.29
LSM3P62310 AC079148.1-201ENST00000565944 819 ntBASIC0.75□□□□□ -2.29
LSM3P62310 MIR4789-201ENST00000577469 82 ntBASIC0.75□□□□□ -2.29
LSM3P62310 AP005136.1-201ENST00000579765 429 ntBASIC0.75□□□□□ -2.29
LSM3P62310 AC090398.1-202ENST00000580403 457 ntTSL 2 BASIC0.75□□□□□ -2.29
LSM3P62310 U91328.3-201ENST00000608931 354 ntTSL 3 BASIC0.75□□□□□ -2.29
LSM3P62310 AL512598.1-201ENST00000610158 273 ntBASIC0.75□□□□□ -2.29
LSM3P62310 AC095038.3-201ENST00000634439 195 ntBASIC0.75□□□□□ -2.29
LSM3P62310 AC068205.3-201ENST00000636385 468 ntBASIC0.75□□□□□ -2.29
LSM3P62310 AC099063.3-201ENST00000642066 185 ntBASIC0.75□□□□□ -2.29
LSM3P62310 KTN1-214ENST00000554507 2057 ntTSL 1 (best) BASIC0.75□□□□□ -2.29
LSM3P62310 TBC1D15-210ENST00000485960 2489 ntAPPRIS P1 TSL 1 (best) BASIC0.74□□□□□ -2.29
LSM3P62310 U8.10-201ENST00000384260 133 ntBASIC0.74□□□□□ -2.29
LSM3P62310 RNU6-1207P-201ENST00000384343 107 ntBASIC0.74□□□□□ -2.29
LSM3P62310 RNU6-754P-201ENST00000391166 107 ntBASIC0.74□□□□□ -2.29
LSM3P62310 ZNF736P10Y-201ENST00000403990 1110 ntBASIC0.74□□□□□ -2.29
LSM3P62310 MIR1267-201ENST00000408723 78 ntBASIC0.74□□□□□ -2.29
LSM3P62310 RPS12P24-201ENST00000412619 387 ntBASIC0.74□□□□□ -2.29
LSM3P62310 AL158050.1-201ENST00000416077 457 ntBASIC0.74□□□□□ -2.29
LSM3P62310 AL050338.2-202ENST00000431609 956 ntTSL 2 BASIC0.74□□□□□ -2.29
LSM3P62310 UBE2V2P3-201ENST00000433562 437 ntBASIC0.74□□□□□ -2.29
LSM3P62310 AC027119.1-201ENST00000440877 241 ntBASIC0.74□□□□□ -2.29
LSM3P62310 MTCO3P45-201ENST00000443036 613 ntBASIC0.74□□□□□ -2.29
LSM3P62310 AC009474.2-201ENST00000451383 136 ntBASIC0.74□□□□□ -2.29
LSM3P62310 AC023194.1-201ENST00000493084 308 ntBASIC0.74□□□□□ -2.29
LSM3P62310 LINC02201-201ENST00000508992 468 ntTSL 2 BASIC0.74□□□□□ -2.29
LSM3P62310 AC112198.4-201ENST00000515450 351 ntBASIC0.74□□□□□ -2.29
LSM3P62310 RNU2-53P-201ENST00000516257 147 ntBASIC0.74□□□□□ -2.29
LSM3P62310 RNU6-551P-201ENST00000516661 103 ntBASIC0.74□□□□□ -2.29
LSM3P62310 AC023632.1-201ENST00000518463 375 ntBASIC0.74□□□□□ -2.29
LSM3P62310 AP003730.2-202ENST00000527281 774 ntTSL 3 BASIC0.74□□□□□ -2.29
LSM3P62310 AL356057.1-201ENST00000533798 831 ntBASIC0.74□□□□□ -2.29
LSM3P62310 LINC01495-202ENST00000534135 343 ntTSL 2 BASIC0.74□□□□□ -2.29
LSM3P62310 TTN-AS1-213ENST00000584485 838 ntTSL 3 BASIC0.74□□□□□ -2.29
LSM3P62310 LINC02109-204ENST00000602801 563 ntTSL 4 BASIC0.74□□□□□ -2.29
LSM3P62310 ATG5-207ENST00000613993 733 ntTSL 1 (best) BASIC0.74□□□□□ -2.29
LSM3P62310 AC013470.4-201ENST00000619978 986 ntBASIC0.74□□□□□ -2.29
LSM3P62310 AC012361.1-201ENST00000447260 1498 ntTSL 1 (best) BASIC0.73□□□□□ -2.29
LSM3P62310 RNU6-932P-201ENST00000391108 106 ntBASIC0.73□□□□□ -2.29
LSM3P62310 SNORA11-201ENST00000408789 128 ntBASIC0.73□□□□□ -2.29
LSM3P62310 RN7SKP284-201ENST00000411002 343 ntBASIC0.73□□□□□ -2.29
LSM3P62310 RPL37P10-201ENST00000412884 288 ntBASIC0.73□□□□□ -2.29
LSM3P62310 SNRPG-202ENST00000413456 398 ntTSL 3 BASIC0.73□□□□□ -2.29
LSM3P62310 AC027644.1-201ENST00000419595 298 ntBASIC0.73□□□□□ -2.29
LSM3P62310 AC241644.2-201ENST00000426504 480 ntTSL 3 BASIC0.73□□□□□ -2.29
LSM3P62310 TRIM60P13-201ENST00000432350 1283 ntBASIC0.73□□□□□ -2.29
LSM3P62310 AC009158.1-207ENST00000432973 394 ntTSL 5 BASIC0.73□□□□□ -2.29
LSM3P62310 AL353743.2-202ENST00000439544 473 ntTSL 3 BASIC0.73□□□□□ -2.29
LSM3P62310 RPL32P28-201ENST00000443577 397 ntBASIC0.73□□□□□ -2.29
LSM3P62310 MTND2P4-201ENST00000445034 1004 ntBASIC0.73□□□□□ -2.29
LSM3P62310 OARD1-209ENST00000471367 401 ntTSL 2 BASIC0.73□□□□□ -2.29
LSM3P62310 AC010631.1-201ENST00000474150 156 ntBASIC0.73□□□□□ -2.29
LSM3P62310 RPL30P1-201ENST00000488676 339 ntBASIC0.73□□□□□ -2.29
LSM3P62310 AC091917.2-201ENST00000505002 744 ntBASIC0.73□□□□□ -2.29
LSM3P62310 LINC02472-201ENST00000512268 575 ntTSL 2 BASIC0.73□□□□□ -2.29
LSM3P62310 RNU6-351P-201ENST00000516097 100 ntBASIC0.73□□□□□ -2.29
LSM3P62310 RNU5B-3P-201ENST00000516601 115 ntBASIC0.73□□□□□ -2.29
LSM3P62310 AC090857.2-201ENST00000526362 723 ntTSL 2 BASIC0.73□□□□□ -2.29
LSM3P62310 AP001189.2-201ENST00000527320 189 ntBASIC0.73□□□□□ -2.29
LSM3P62310 AC130415.1-201ENST00000547569 1010 ntTSL 4 BASIC0.73□□□□□ -2.29
LSM3P62310 AC044913.1-201ENST00000557200 430 ntBASIC0.73□□□□□ -2.29
LSM3P62310 AL731537.2-201ENST00000561565 951 ntBASIC0.73□□□□□ -2.29
LSM3P62310 AC005774.1-201ENST00000565247 567 ntTSL 4 BASIC0.73□□□□□ -2.29
LSM3P62310 SUB1P4-201ENST00000566062 339 ntBASIC0.73□□□□□ -2.29
LSM3P62310 AC090330.1-201ENST00000588646 764 ntBASIC0.73□□□□□ -2.29
LSM3P62310 SOX2-OT-224ENST00000595313 716 ntTSL 5 BASIC0.73□□□□□ -2.29
LSM3P62310 AC073410.2-201ENST00000603240 332 ntBASIC0.73□□□□□ -2.29
LSM3P62310 AC097468.3-201ENST00000607956 456 ntBASIC0.73□□□□□ -2.29
LSM3P62310 AC093788.1-201ENST00000609356 927 ntBASIC0.73□□□□□ -2.29
LSM3P62310 AC253576.2-201ENST00000618815 580 ntBASIC0.73□□□□□ -2.29
LSM3P62310 DLEU2_6.3-201ENST00000340052 136 ntBASIC0.72□□□□□ -2.29
LSM3P62310 RNU6-23P-201ENST00000363283 107 ntBASIC0.72□□□□□ -2.29
LSM3P62310 RNU6-97P-201ENST00000363387 104 ntBASIC0.72□□□□□ -2.29
LSM3P62310 SNORA70.7-201ENST00000384159 133 ntBASIC0.72□□□□□ -2.29
LSM3P62310 MIR186-201ENST00000384988 86 ntBASIC0.72□□□□□ -2.29
LSM3P62310 RPL23AP32-201ENST00000395315 459 ntBASIC0.72□□□□□ -2.29
LSM3P62310 SRIP3-201ENST00000413200 219 ntBASIC0.72□□□□□ -2.29
LSM3P62310 TPMTP2-201ENST00000414372 726 ntBASIC0.72□□□□□ -2.29
LSM3P62310 AL022400.1-201ENST00000423946 935 ntBASIC0.72□□□□□ -2.29
LSM3P62310 TOMM20P4-201ENST00000427861 435 ntBASIC0.72□□□□□ -2.29
LSM3P62310 AL669831.1-202ENST00000428504 417 ntBASIC0.72□□□□□ -2.29
LSM3P62310 AL024474.2-201ENST00000431309 501 ntTSL 3 BASIC0.72□□□□□ -2.29
LSM3P62310 GTF2IP3-201ENST00000433887 494 ntBASIC0.72□□□□□ -2.29
LSM3P62310 AL139237.2-201ENST00000438454 493 ntTSL 3 BASIC0.72□□□□□ -2.29
LSM3P62310 AC007003.1-202ENST00000439318 349 ntTSL 5 BASIC0.72□□□□□ -2.29
LSM3P62310 RPS27P1-201ENST00000450552 247 ntBASIC0.72□□□□□ -2.29
LSM3P62310 GUCA1C-203ENST00000471108 633 ntTSL 2 BASIC0.72□□□□□ -2.29
LSM3P62310 AC108078.1-201ENST00000508073 725 ntBASIC0.72□□□□□ -2.29
LSM3P62310 AC109329.1-201ENST00000518744 317 ntBASIC0.72□□□□□ -2.29
LSM3P62310 AC022616.8-201ENST00000533569 253 ntBASIC0.72□□□□□ -2.29
LSM3P62310 AC006518.2-201ENST00000542513 940 ntBASIC0.72□□□□□ -2.29
LSM3P62310 MIR4698-201ENST00000577795 80 ntBASIC0.72□□□□□ -2.29
LSM3P62310 AC012065.4-201ENST00000602445 679 ntBASIC0.72□□□□□ -2.29
LSM3P62310 FAM71BP1-201ENST00000604431 523 ntBASIC0.72□□□□□ -2.29
LSM3P62310 AL583856.2-201ENST00000606298 543 ntBASIC0.72□□□□□ -2.29
LSM3P62310 AC098614.4-201ENST00000607601 462 ntBASIC0.72□□□□□ -2.29
Retrieved 100 of 98,524 protein–RNA pairs in 104.7 ms