Protein–RNA interactions for Protein: P60507

ERVFC1, Endogenous retrovirus group FC1 Env polyprotein, humanhuman

Predictions only

Length 584 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERVFC1P60507 NCBP1-205ENST00000629069 249 ntTSL 5 BASIC4.21□□□□□ -1.74
ERVFC1P60507 PSG1-205ENST00000595124 1692 ntTSL 2 BASIC4.21□□□□□ -1.74
ERVFC1P60507 CPNE8-202ENST00000360449 1757 ntAPPRIS ALT2 TSL 2 BASIC4.21□□□□□ -1.74
ERVFC1P60507 LINC02232-201ENST00000509932 4079 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
ERVFC1P60507 MTTP-201ENST00000265517 4037 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
ERVFC1P60507 OR10J1-203ENST00000642080 3503 ntAPPRIS P1 BASIC4.21□□□□□ -1.74
ERVFC1P60507 IQCH-206ENST00000546225 3112 ntTSL 5 BASIC4.21□□□□□ -1.74
ERVFC1P60507 BCLAF1-207ENST00000527759 4373 ntAPPRIS ALT2 TSL 1 (best) BASIC4.21□□□□□ -1.74
ERVFC1P60507 SUCNR1-201ENST00000362032 4181 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
ERVFC1P60507 DOCK7-219ENST00000635253 6423 ntAPPRIS ALT2 TSL 5 BASIC4.21□□□□□ -1.74
ERVFC1P60507 MAP3K21-201ENST00000366622 4005 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
ERVFC1P60507 FKTN-201ENST00000223528 7364 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
ERVFC1P60507 DMD-229ENST00000619831 13734 ntAPPRIS ALT2 TSL 5 BASIC4.2□□□□□ -1.74
ERVFC1P60507 THOC2-202ENST00000355725 4930 ntAPPRIS P1 TSL 5 BASIC4.2□□□□□ -1.74
ERVFC1P60507 ORC3-201ENST00000257789 2501 ntAPPRIS P3 TSL 1 (best) BASIC4.2□□□□□ -1.74
ERVFC1P60507 MUC7-201ENST00000304887 2443 ntAPPRIS P2 TSL 1 (best) BASIC4.2□□□□□ -1.74
ERVFC1P60507 ZZZ3-202ENST00000370801 4328 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
ERVFC1P60507 MTX3-203ENST00000512560 4799 ntTSL 2 BASIC4.2□□□□□ -1.74
ERVFC1P60507 RNU6-1266P-201ENST00000362794 105 ntBASIC4.2□□□□□ -1.74
ERVFC1P60507 Y_RNA.83-201ENST00000363005 113 ntBASIC4.2□□□□□ -1.74
ERVFC1P60507 Y_RNA.277-201ENST00000364754 102 ntBASIC4.2□□□□□ -1.74
ERVFC1P60507 Y_RNA.439-201ENST00000384119 94 ntBASIC4.2□□□□□ -1.74
ERVFC1P60507 MIR153-1-201ENST00000384914 90 ntBASIC4.2□□□□□ -1.74
ERVFC1P60507 MIR34B-201ENST00000385076 84 ntBASIC4.2□□□□□ -1.74
ERVFC1P60507 RNA5SP494-201ENST00000410653 129 ntBASIC4.2□□□□□ -1.74
ERVFC1P60507 Y_RNA.793-201ENST00000411222 111 ntBASIC4.2□□□□□ -1.74
ERVFC1P60507 LIMS1-AS1-201ENST00000411710 477 ntTSL 3 BASIC4.2□□□□□ -1.74
ERVFC1P60507 AL606753.1-201ENST00000427435 87 ntBASIC4.2□□□□□ -1.74
ERVFC1P60507 AL451050.1-201ENST00000450126 415 ntBASIC4.2□□□□□ -1.74
ERVFC1P60507 AC012158.1-204ENST00000483430 465 ntBASIC4.2□□□□□ -1.74
ERVFC1P60507 AL359273.1-201ENST00000510918 627 ntBASIC4.2□□□□□ -1.74
ERVFC1P60507 RN7SKP234-201ENST00000517173 224 ntBASIC4.2□□□□□ -1.74
ERVFC1P60507 AC090281.1-201ENST00000523019 276 ntBASIC4.2□□□□□ -1.74
ERVFC1P60507 AP002833.1-201ENST00000530572 566 ntTSL 3 BASIC4.2□□□□□ -1.74
ERVFC1P60507 AC025254.1-201ENST00000550035 247 ntTSL 5 BASIC4.2□□□□□ -1.74
ERVFC1P60507 TRAV37-201ENST00000553906 342 ntBASIC4.2□□□□□ -1.74
ERVFC1P60507 AC136932.1-201ENST00000574771 208 ntBASIC4.2□□□□□ -1.74
ERVFC1P60507 AC097467.3-205ENST00000597955 594 ntTSL 5 BASIC4.2□□□□□ -1.74
ERVFC1P60507 MIR376A1-201ENST00000616574 68 ntBASIC4.2□□□□□ -1.74
ERVFC1P60507 TRMT10A-203ENST00000394877 3516 ntAPPRIS P1 TSL 2 BASIC4.2□□□□□ -1.74
ERVFC1P60507 CYP3A7-201ENST00000336374 1971 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
ERVFC1P60507 RNF128-202ENST00000324342 2654 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
ERVFC1P60507 AK9-202ENST00000355283 2499 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
ERVFC1P60507 CD80-201ENST00000264246 2725 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
ERVFC1P60507 HSPA8P1-201ENST00000425843 1833 ntBASIC4.19□□□□□ -1.74
ERVFC1P60507 RNA5SP502-201ENST00000362694 119 ntBASIC4.19□□□□□ -1.74
ERVFC1P60507 Y_RNA.54-201ENST00000362766 105 ntBASIC4.19□□□□□ -1.74
ERVFC1P60507 RNU6-263P-201ENST00000363811 107 ntBASIC4.19□□□□□ -1.74
ERVFC1P60507 RNA5SP97-201ENST00000365006 84 ntBASIC4.19□□□□□ -1.74
ERVFC1P60507 U1.1-201ENST00000384101 164 ntBASIC4.19□□□□□ -1.74
ERVFC1P60507 Y_RNA.506-201ENST00000384494 102 ntBASIC4.19□□□□□ -1.74
ERVFC1P60507 MIR183-201ENST00000384958 110 ntBASIC4.19□□□□□ -1.74
ERVFC1P60507 MIR195-201ENST00000385194 87 ntBASIC4.19□□□□□ -1.74
ERVFC1P60507 Y_RNA.581-201ENST00000391017 97 ntBASIC4.19□□□□□ -1.74
ERVFC1P60507 EI24P1-201ENST00000416584 867 ntBASIC4.19□□□□□ -1.74
ERVFC1P60507 AC012370.1-201ENST00000419244 530 ntTSL 3 BASIC4.19□□□□□ -1.74
ERVFC1P60507 AL139247.1-201ENST00000422768 325 ntBASIC4.19□□□□□ -1.74
ERVFC1P60507 BX679664.1-201ENST00000434429 253 ntBASIC4.19□□□□□ -1.74
ERVFC1P60507 INTS6-AS1-201ENST00000434512 466 ntTSL 3 BASIC4.19□□□□□ -1.74
ERVFC1P60507 AC098831.1-201ENST00000440661 216 ntBASIC4.19□□□□□ -1.74
ERVFC1P60507 AC010975.1-201ENST00000443301 669 ntTSL 3 BASIC4.19□□□□□ -1.74
ERVFC1P60507 AC007099.2-201ENST00000444852 336 ntTSL 5 BASIC4.19□□□□□ -1.74
ERVFC1P60507 RPL29P29-201ENST00000448725 423 ntBASIC4.19□□□□□ -1.74
ERVFC1P60507 SNRPG-205ENST00000449935 428 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
ERVFC1P60507 snoU13.24-201ENST00000458998 104 ntBASIC4.19□□□□□ -1.74
ERVFC1P60507 U8.21-201ENST00000459536 136 ntBASIC4.19□□□□□ -1.74
ERVFC1P60507 AC010469.2-201ENST00000496412 480 ntBASIC4.19□□□□□ -1.74
ERVFC1P60507 UBE2CP3-201ENST00000502715 450 ntBASIC4.19□□□□□ -1.74
ERVFC1P60507 RNU6-1315P-201ENST00000517187 99 ntBASIC4.19□□□□□ -1.74
ERVFC1P60507 IGKV2D-19-201ENST00000523346 262 ntBASIC4.19□□□□□ -1.74
ERVFC1P60507 LINC02350-201ENST00000544419 480 ntTSL 3 BASIC4.19□□□□□ -1.74
ERVFC1P60507 RPL21P7-201ENST00000557463 483 ntBASIC4.19□□□□□ -1.74
ERVFC1P60507 AC012229.1-201ENST00000558699 499 ntTSL 4 BASIC4.19□□□□□ -1.74
ERVFC1P60507 AC011933.3-201ENST00000578226 372 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
ERVFC1P60507 MIR3922-201ENST00000585192 84 ntBASIC4.19□□□□□ -1.74
ERVFC1P60507 AC022601.1-201ENST00000596954 577 ntTSL 4 BASIC4.19□□□□□ -1.74
ERVFC1P60507 AC009318.2-201ENST00000610917 651 ntBASIC4.19□□□□□ -1.74
ERVFC1P60507 LINC01232-201ENST00000625254 836 ntTSL 5 BASIC4.19□□□□□ -1.74
ERVFC1P60507 OR8J3-203ENST00000641913 3047 ntAPPRIS P1 BASIC4.19□□□□□ -1.74
ERVFC1P60507 KCNJ16-201ENST00000283936 4062 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
ERVFC1P60507 ADGRL3-216ENST00000514157 4789 ntTSL 5 BASIC4.19□□□□□ -1.74
ERVFC1P60507 MUC7-203ENST00000456088 2479 ntAPPRIS P2 TSL 4 BASIC4.19□□□□□ -1.74
ERVFC1P60507 PLCB1-233ENST00000637919 5074 ntTSL 5 BASIC4.19□□□□□ -1.74
ERVFC1P60507 ZNF594-201ENST00000399604 4862 ntAPPRIS P1 BASIC4.19□□□□□ -1.74
ERVFC1P60507 GPR180-201ENST00000376958 8822 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
ERVFC1P60507 ZNF638-203ENST00000409544 6821 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
ERVFC1P60507 MGAT4A-204ENST00000414521 3709 ntTSL 2 BASIC4.19□□□□□ -1.74
ERVFC1P60507 LINC00283-201ENST00000430111 1947 ntTSL 5 BASIC4.19□□□□□ -1.74
ERVFC1P60507 KIAA0586-202ENST00000354386 5226 ntAPPRIS ALT2 TSL 2 BASIC4.18□□□□□ -1.74
ERVFC1P60507 GABPB1-AS1-202ENST00000499624 16182 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
ERVFC1P60507 NUP35-201ENST00000295119 1633 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
ERVFC1P60507 KLHL13-208ENST00000541812 3102 ntTSL 2 BASIC4.18□□□□□ -1.74
ERVFC1P60507 AL356489.2-201ENST00000566968 3528 ntBASIC4.18□□□□□ -1.74
ERVFC1P60507 CLIC2-202ENST00000369449 2655 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
ERVFC1P60507 AC007685.1-201ENST00000329806 452 ntBASIC4.18□□□□□ -1.74
ERVFC1P60507 RNU1-15P-201ENST00000353977 144 ntBASIC4.18□□□□□ -1.74
ERVFC1P60507 RNU6-1159P-201ENST00000362933 107 ntBASIC4.18□□□□□ -1.74
ERVFC1P60507 SNORD50.1-201ENST00000362987 71 ntBASIC4.18□□□□□ -1.74
ERVFC1P60507 RNU6-1249P-201ENST00000363237 111 ntBASIC4.18□□□□□ -1.74
ERVFC1P60507 RNU6-395P-201ENST00000365662 106 ntBASIC4.18□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 117 ms