Protein–RNA interactions for Protein: P56747

CLDN6, Claudin-6, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN6P56747 MIR337-201ENST00000362281 93 ntBASIC1.75□□□□□ -2.13
CLDN6P56747 RNA5SP276-201ENST00000362580 94 ntBASIC1.75□□□□□ -2.13
CLDN6P56747 RNU6-433P-201ENST00000363216 104 ntBASIC1.75□□□□□ -2.13
CLDN6P56747 RNU4-92P-201ENST00000363783 136 ntBASIC1.75□□□□□ -2.13
CLDN6P56747 KIF27-203ENST00000376347 1030 ntTSL 5 BASIC1.75□□□□□ -2.13
CLDN6P56747 MIR489-201ENST00000384923 84 ntBASIC1.75□□□□□ -2.13
CLDN6P56747 MIR676-201ENST00000390702 67 ntBASIC1.75□□□□□ -2.13
CLDN6P56747 HMGN2P39-201ENST00000398005 273 ntBASIC1.75□□□□□ -2.13
CLDN6P56747 AF130351.1-202ENST00000400562 808 ntAPPRIS P5 TSL 3 BASIC1.75□□□□□ -2.13
CLDN6P56747 FCF1P10-201ENST00000407590 479 ntBASIC1.75□□□□□ -2.13
CLDN6P56747 ELOCP17-201ENST00000414751 326 ntBASIC1.75□□□□□ -2.13
CLDN6P56747 ELOCP9-201ENST00000418624 239 ntBASIC1.75□□□□□ -2.13
CLDN6P56747 AL358453.1-201ENST00000422522 250 ntBASIC1.75□□□□□ -2.13
CLDN6P56747 AL024508.1-201ENST00000432477 505 ntTSL 2 BASIC1.75□□□□□ -2.13
CLDN6P56747 AL161935.3-201ENST00000433770 347 ntTSL 2 BASIC1.75□□□□□ -2.13
CLDN6P56747 AL031313.1-201ENST00000448435 256 ntBASIC1.75□□□□□ -2.13
CLDN6P56747 AL160287.1-201ENST00000455612 432 ntTSL 3 BASIC1.75□□□□□ -2.13
CLDN6P56747 AF129075.1-201ENST00000457162 794 ntTSL 3 BASIC1.75□□□□□ -2.13
CLDN6P56747 RNA5SP233-201ENST00000459153 113 ntBASIC1.75□□□□□ -2.13
CLDN6P56747 MTND1P3-201ENST00000484956 952 ntBASIC1.75□□□□□ -2.13
CLDN6P56747 AL163540.1-201ENST00000485382 386 ntBASIC1.75□□□□□ -2.13
CLDN6P56747 RPL36AP21-201ENST00000490372 323 ntBASIC1.75□□□□□ -2.13
CLDN6P56747 AC022493.1-201ENST00000492984 337 ntBASIC1.75□□□□□ -2.13
CLDN6P56747 RNA5SP137-201ENST00000516833 135 ntBASIC1.75□□□□□ -2.13
CLDN6P56747 AC069133.1-201ENST00000522857 566 ntTSL 4 BASIC1.75□□□□□ -2.13
CLDN6P56747 POC1B-211ENST00000549504 581 ntTSL 5 BASIC1.75□□□□□ -2.13
CLDN6P56747 TIMM9-203ENST00000555061 598 ntAPPRIS P1 TSL 1 (best) BASIC1.75□□□□□ -2.13
CLDN6P56747 MIR3935-201ENST00000583472 104 ntBASIC1.75□□□□□ -2.13
CLDN6P56747 MIR4448-201ENST00000584360 86 ntBASIC1.75□□□□□ -2.13
CLDN6P56747 AC092296.3-201ENST00000589968 249 ntTSL 3 BASIC1.75□□□□□ -2.13
CLDN6P56747 VN1R82P-201ENST00000601481 356 ntBASIC1.75□□□□□ -2.13
CLDN6P56747 AC087045.1-201ENST00000605856 382 ntBASIC1.75□□□□□ -2.13
CLDN6P56747 C3orf49-203ENST00000616659 876 ntAPPRIS ALT2 TSL 5 BASIC1.75□□□□□ -2.13
CLDN6P56747 USP12-203ENST00000620323 349 ntTSL 3 BASIC1.75□□□□□ -2.13
CLDN6P56747 DLEU2_6.2-201ENST00000620994 136 ntBASIC1.75□□□□□ -2.13
CLDN6P56747 AL160287.1-202ENST00000638113 454 ntTSL 5 BASIC1.75□□□□□ -2.13
CLDN6P56747 XIRP2-201ENST00000295237 5246 ntTSL 2 BASIC1.75□□□□□ -2.13
CLDN6P56747 CGGBP1-202ENST00000398392 5298 ntAPPRIS P1 BASIC1.75□□□□□ -2.13
CLDN6P56747 AC103993.1-201ENST00000521500 1584 ntTSL 5 BASIC1.74□□□□□ -2.13
CLDN6P56747 MIR95-201ENST00000385072 81 ntBASIC1.74□□□□□ -2.13
CLDN6P56747 MIR301A-201ENST00000385261 86 ntBASIC1.74□□□□□ -2.13
CLDN6P56747 MIR1294-201ENST00000408503 142 ntBASIC1.74□□□□□ -2.13
CLDN6P56747 AC093423.2-201ENST00000429074 437 ntTSL 3 BASIC1.74□□□□□ -2.13
CLDN6P56747 AC017048.2-201ENST00000431455 822 ntTSL 3 BASIC1.74□□□□□ -2.13
CLDN6P56747 LINC00189-202ENST00000431661 308 ntTSL 5 BASIC1.74□□□□□ -2.13
CLDN6P56747 TRBV25OR9-2-201ENST00000438417 374 ntBASIC1.74□□□□□ -2.13
CLDN6P56747 AL078601.1-201ENST00000444542 271 ntBASIC1.74□□□□□ -2.13
CLDN6P56747 snoU109.3-201ENST00000459477 145 ntBASIC1.74□□□□□ -2.13
CLDN6P56747 PSMA3P-201ENST00000555485 635 ntBASIC1.74□□□□□ -2.13
CLDN6P56747 AC233702.2-202ENST00000562547 291 ntBASIC1.74□□□□□ -2.13
CLDN6P56747 AL713866.2-201ENST00000603579 219 ntBASIC1.74□□□□□ -2.13
CLDN6P56747 APOOP1-201ENST00000604695 592 ntBASIC1.74□□□□□ -2.13
CLDN6P56747 AL158050.2-201ENST00000605336 568 ntBASIC1.74□□□□□ -2.13
CLDN6P56747 AC092953.2-201ENST00000608000 699 ntBASIC1.74□□□□□ -2.13
CLDN6P56747 AC012360.2-201ENST00000609349 391 ntBASIC1.74□□□□□ -2.13
CLDN6P56747 AC097478.2-201ENST00000610572 514 ntBASIC1.74□□□□□ -2.13
CLDN6P56747 DUXAP9-208ENST00000622815 614 ntBASIC1.74□□□□□ -2.13
CLDN6P56747 AC244517.7-201ENST00000625144 398 ntTSL 3 BASIC1.74□□□□□ -2.13
CLDN6P56747 hsa-mir-3158-1.1-201ENST00000637571 81 ntBASIC1.74□□□□□ -2.13
CLDN6P56747 MRPL42-202ENST00000393128 1983 ntAPPRIS ALT1 TSL 3 BASIC1.74□□□□□ -2.13
CLDN6P56747 ZNF702P-202ENST00000434269 1966 ntBASIC1.74□□□□□ -2.13
CLDN6P56747 XRCC4-205ENST00000511817 1636 ntAPPRIS P4 TSL 1 (best) BASIC1.73□□□□□ -2.13
CLDN6P56747 LINC01938-201ENST00000521341 1864 ntTSL 2 BASIC1.73□□□□□ -2.13
CLDN6P56747 ZNF736P9Y-201ENST00000439586 1345 ntBASIC1.73□□□□□ -2.13
CLDN6P56747 ATP13A3-201ENST00000256031 7322 ntAPPRIS P1 TSL 5 BASIC1.73□□□□□ -2.13
CLDN6P56747 U3.13-201ENST00000364804 214 ntBASIC1.73□□□□□ -2.13
CLDN6P56747 SNORA25.9-201ENST00000365087 128 ntBASIC1.73□□□□□ -2.13
CLDN6P56747 SNORA25B-201ENST00000365507 128 ntBASIC1.73□□□□□ -2.13
CLDN6P56747 MIR518D-201ENST00000385014 87 ntBASIC1.73□□□□□ -2.13
CLDN6P56747 MIR561-201ENST00000385216 97 ntBASIC1.73□□□□□ -2.13
CLDN6P56747 AL512604.1-201ENST00000404812 257 ntBASIC1.73□□□□□ -2.13
CLDN6P56747 AC127391.1-201ENST00000411737 98 ntBASIC1.73□□□□□ -2.13
CLDN6P56747 RPL23AP39-201ENST00000415533 405 ntBASIC1.73□□□□□ -2.13
CLDN6P56747 AC096920.1-201ENST00000423991 241 ntBASIC1.73□□□□□ -2.13
CLDN6P56747 AL139397.1-201ENST00000430456 644 ntTSL 2 BASIC1.73□□□□□ -2.13
CLDN6P56747 AL591212.2-201ENST00000433923 257 ntBASIC1.73□□□□□ -2.13
CLDN6P56747 UBE2FP3-201ENST00000436366 524 ntBASIC1.73□□□□□ -2.13
CLDN6P56747 AL035415.1-201ENST00000447150 289 ntTSL 5 BASIC1.73□□□□□ -2.13
CLDN6P56747 AC134050.1-201ENST00000495088 933 ntBASIC1.73□□□□□ -2.13
CLDN6P56747 RNU6ATAC12P-201ENST00000516542 115 ntBASIC1.73□□□□□ -2.13
CLDN6P56747 SNORA48.11-201ENST00000517015 89 ntBASIC1.73□□□□□ -2.13
CLDN6P56747 AC090796.1-201ENST00000520370 567 ntTSL 4 BASIC1.73□□□□□ -2.13
CLDN6P56747 FAM92A1P1-201ENST00000528023 890 ntBASIC1.73□□□□□ -2.13
CLDN6P56747 AC123905.1-201ENST00000552098 541 ntTSL 4 BASIC1.73□□□□□ -2.13
CLDN6P56747 DUXAP1-201ENST00000556632 463 ntBASIC1.73□□□□□ -2.13
CLDN6P56747 ANP32BP3-201ENST00000559213 706 ntBASIC1.73□□□□□ -2.13
CLDN6P56747 AL356432.3-201ENST00000568952 465 ntBASIC1.73□□□□□ -2.13
CLDN6P56747 AC107952.2-201ENST00000606048 486 ntBASIC1.73□□□□□ -2.13
CLDN6P56747 AL157392.4-201ENST00000609756 345 ntBASIC1.73□□□□□ -2.13
CLDN6P56747 AL627230.6-201ENST00000611129 280 ntBASIC1.73□□□□□ -2.13
CLDN6P56747 PDCD6IPP1-201ENST00000615124 579 ntTSL 2 BASIC1.73□□□□□ -2.13
CLDN6P56747 AC008121.3-201ENST00000618726 433 ntBASIC1.73□□□□□ -2.13
CLDN6P56747 AP000484.1-201ENST00000620067 1252 ntBASIC1.73□□□□□ -2.13
CLDN6P56747 AC068631.1-221ENST00000626006 592 ntTSL 5 BASIC1.73□□□□□ -2.13
CLDN6P56747 MTND5P42-201ENST00000637720 498 ntBASIC1.73□□□□□ -2.13
CLDN6P56747 SCOC-201ENST00000338517 1864 ntTSL 4 BASIC1.73□□□□□ -2.13
CLDN6P56747 PCDH11Y-203ENST00000362095 4220 ntAPPRIS ALT2 TSL 1 (best) BASIC1.72□□□□□ -2.13
CLDN6P56747 RNY3P13-201ENST00000365542 102 ntBASIC1.72□□□□□ -2.13
CLDN6P56747 RNU6-636P-201ENST00000384598 107 ntBASIC1.72□□□□□ -2.13
CLDN6P56747 RNU6-1242P-201ENST00000391052 103 ntBASIC1.72□□□□□ -2.13
Retrieved 100 of 98,524 protein–RNA pairs in 87.4 ms