Protein–RNA interactions for Protein: P55287

CDH11, Cadherin-11, humanhuman

Predictions only

Length 796 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH11P55287 AC005062.1-207ENST00000418442 587 ntTSL 3 BASIC2.71□□□□□ -1.98
CDH11P55287 AL139281.1-201ENST00000422120 335 ntBASIC2.71□□□□□ -1.98
CDH11P55287 AL592466.1-201ENST00000428346 307 ntTSL 5 BASIC2.71□□□□□ -1.98
CDH11P55287 AL451060.1-203ENST00000431307 362 ntTSL 3 BASIC2.71□□□□□ -1.98
CDH11P55287 HMGB1P31-201ENST00000437242 427 ntBASIC2.71□□□□□ -1.98
CDH11P55287 AL137789.1-201ENST00000439443 682 ntTSL 3 BASIC2.71□□□□□ -1.98
CDH11P55287 U91324.1-201ENST00000442864 447 ntTSL 5 BASIC2.71□□□□□ -1.98
CDH11P55287 MTATP6P7-201ENST00000453315 681 ntBASIC2.71□□□□□ -1.98
CDH11P55287 AL353780.1-201ENST00000455583 458 ntTSL 2 BASIC2.71□□□□□ -1.98
CDH11P55287 AL139260.1-202ENST00000456813 441 ntTSL 3 BASIC2.71□□□□□ -1.98
CDH11P55287 snoU13.28-201ENST00000459235 104 ntBASIC2.71□□□□□ -1.98
CDH11P55287 HMGN2P26-201ENST00000463169 339 ntBASIC2.71□□□□□ -1.98
CDH11P55287 MTCYBP18-201ENST00000501056 747 ntBASIC2.71□□□□□ -1.98
CDH11P55287 RNU1-86P-201ENST00000516108 154 ntBASIC2.71□□□□□ -1.98
CDH11P55287 RNU1-107P-201ENST00000516617 154 ntBASIC2.71□□□□□ -1.98
CDH11P55287 SNORD59.2-201ENST00000516873 68 ntBASIC2.71□□□□□ -1.98
CDH11P55287 MTND4P7-201ENST00000523876 130 ntBASIC2.71□□□□□ -1.98
CDH11P55287 AC078814.3-201ENST00000553036 491 ntBASIC2.71□□□□□ -1.98
CDH11P55287 OR11H5P-201ENST00000554039 926 ntBASIC2.71□□□□□ -1.98
CDH11P55287 ATP5A1P2-202ENST00000616464 443 ntBASIC2.71□□□□□ -1.98
CDH11P55287 AC105265.4-201ENST00000618391 306 ntTSL 5 BASIC2.71□□□□□ -1.98
CDH11P55287 AC006386.2-201ENST00000624491 75 ntBASIC2.71□□□□□ -1.98
CDH11P55287 AC012005.1-201ENST00000624575 75 ntBASIC2.71□□□□□ -1.98
CDH11P55287 LINC01002-215ENST00000632203 314 ntTSL 5 BASIC2.71□□□□□ -1.98
CDH11P55287 AKAP7-209ENST00000541650 2008 ntTSL 5 BASIC2.71□□□□□ -1.98
CDH11P55287 FAM46D-201ENST00000308293 3011 ntAPPRIS P1 TSL 1 (best) BASIC2.71□□□□□ -1.98
CDH11P55287 GMFB-208ENST00000554908 6721 ntTSL 1 (best) BASIC2.71□□□□□ -1.98
CDH11P55287 FAM35BP-202ENST00000497389 3337 ntBASIC2.7□□□□□ -1.98
CDH11P55287 PHTF2-202ENST00000275575 4541 ntTSL 1 (best) BASIC2.7□□□□□ -1.98
CDH11P55287 NACAP2-201ENST00000318548 624 ntBASIC2.7□□□□□ -1.98
CDH11P55287 RNU6-82P-201ENST00000363970 107 ntBASIC2.7□□□□□ -1.98
CDH11P55287 RNU6-384P-201ENST00000364900 104 ntBASIC2.7□□□□□ -1.98
CDH11P55287 FAM107B-204ENST00000378465 1052 ntAPPRIS P1 TSL 2 BASIC2.7□□□□□ -1.98
CDH11P55287 RNU1-73P-201ENST00000383971 164 ntBASIC2.7□□□□□ -1.98
CDH11P55287 RNU6-45P-201ENST00000384471 107 ntBASIC2.7□□□□□ -1.98
CDH11P55287 RNU6-393P-201ENST00000384475 107 ntBASIC2.7□□□□□ -1.98
CDH11P55287 TRAJ21-201ENST00000390516 55 ntAPPRIS P1 BASIC2.7□□□□□ -1.98
CDH11P55287 AL592114.1-201ENST00000403842 483 ntBASIC2.7□□□□□ -1.98
CDH11P55287 RNA5SP118-201ENST00000410385 109 ntBASIC2.7□□□□□ -1.98
CDH11P55287 RNU6-607P-201ENST00000411283 108 ntBASIC2.7□□□□□ -1.98
CDH11P55287 AL592148.1-201ENST00000413568 445 ntBASIC2.7□□□□□ -1.98
CDH11P55287 CYCSP33-201ENST00000414485 327 ntBASIC2.7□□□□□ -1.98
CDH11P55287 AC005482.1-201ENST00000420758 575 ntTSL 4 BASIC2.7□□□□□ -1.98
CDH11P55287 AC098614.2-201ENST00000426040 255 ntBASIC2.7□□□□□ -1.98
CDH11P55287 AC022018.1-201ENST00000430685 241 ntBASIC2.7□□□□□ -1.98
CDH11P55287 AL033504.1-204ENST00000434985 413 ntTSL 2 BASIC2.7□□□□□ -1.98
CDH11P55287 MTCO3P18-201ENST00000440206 761 ntBASIC2.7□□□□□ -1.98
CDH11P55287 NDUFB1P2-201ENST00000449477 176 ntBASIC2.7□□□□□ -1.98
CDH11P55287 AL441989.1-201ENST00000454204 382 ntTSL 3 BASIC2.7□□□□□ -1.98
CDH11P55287 RPS29P20-201ENST00000489592 171 ntBASIC2.7□□□□□ -1.98
CDH11P55287 RPS27AP10-201ENST00000496103 208 ntBASIC2.7□□□□□ -1.98
CDH11P55287 AC008539.1-201ENST00000507653 482 ntTSL 3 BASIC2.7□□□□□ -1.98
CDH11P55287 MTND3P25-201ENST00000509243 135 ntBASIC2.7□□□□□ -1.98
CDH11P55287 AC016556.1-201ENST00000510004 935 ntTSL 2 BASIC2.7□□□□□ -1.98
CDH11P55287 AC097375.2-201ENST00000510416 579 ntTSL 5 BASIC2.7□□□□□ -1.98
CDH11P55287 AC008716.1-201ENST00000511084 513 ntBASIC2.7□□□□□ -1.98
CDH11P55287 AC108067.1-201ENST00000514304 215 ntTSL 5 BASIC2.7□□□□□ -1.98
CDH11P55287 AC008885.1-201ENST00000514930 301 ntBASIC2.7□□□□□ -1.98
CDH11P55287 CENPUP1-201ENST00000526649 1202 ntBASIC2.7□□□□□ -1.98
CDH11P55287 AC090115.3-201ENST00000553218 849 ntBASIC2.7□□□□□ -1.98
CDH11P55287 AL133241.1-201ENST00000556832 487 ntBASIC2.7□□□□□ -1.98
CDH11P55287 CYCSP39-201ENST00000565821 309 ntBASIC2.7□□□□□ -1.98
CDH11P55287 LRRC37A5P-203ENST00000580181 585 ntBASIC2.7□□□□□ -1.98
CDH11P55287 AC060780.3-201ENST00000589464 80 ntBASIC2.7□□□□□ -1.98
CDH11P55287 RMST_4.1-201ENST00000616886 107 ntBASIC2.7□□□□□ -1.98
CDH11P55287 AC006504.8-201ENST00000621046 635 ntBASIC2.7□□□□□ -1.98
CDH11P55287 AC006111.3-201ENST00000622137 383 ntBASIC2.7□□□□□ -1.98
CDH11P55287 SCARNA15.3-201ENST00000626315 122 ntBASIC2.7□□□□□ -1.98
CDH11P55287 SCARNA4.1-201ENST00000628597 123 ntBASIC2.7□□□□□ -1.98
CDH11P55287 MTND4P14-201ENST00000435799 1354 ntBASIC2.7□□□□□ -1.98
CDH11P55287 MTND4P35-201ENST00000604257 1375 ntBASIC2.7□□□□□ -1.98
CDH11P55287 Z82195.2-201ENST00000612348 18351 ntBASIC2.7□□□□□ -1.98
CDH11P55287 ZCCHC10-201ENST00000324170 2178 ntAPPRIS P3 TSL 1 (best) BASIC2.7□□□□□ -1.98
CDH11P55287 AKAP9-202ENST00000358100 10309 ntTSL 1 (best) BASIC2.7□□□□□ -1.98
CDH11P55287 LINC01419-201ENST00000522365 1521 ntTSL 1 (best) BASIC2.69□□□□□ -1.98
CDH11P55287 AGTR1-204ENST00000418473 2071 ntTSL 5 BASIC2.69□□□□□ -1.98
CDH11P55287 DEFB107A-201ENST00000335021 389 ntAPPRIS P1 TSL 1 (best) BASIC2.69□□□□□ -1.98
CDH11P55287 DEFB107B-201ENST00000355602 389 ntAPPRIS P1 TSL 1 (best) BASIC2.69□□□□□ -1.98
CDH11P55287 SNORA14A-201ENST00000364773 135 ntBASIC2.69□□□□□ -1.98
CDH11P55287 RNU4-66P-201ENST00000365199 138 ntBASIC2.69□□□□□ -1.98
CDH11P55287 Y_RNA.378-201ENST00000365652 113 ntBASIC2.69□□□□□ -1.98
CDH11P55287 RNU6-434P-201ENST00000384376 107 ntBASIC2.69□□□□□ -1.98
CDH11P55287 SNORD88.1-201ENST00000408684 91 ntBASIC2.69□□□□□ -1.98
CDH11P55287 RPL26P27-201ENST00000414397 437 ntBASIC2.69□□□□□ -1.98
CDH11P55287 BX682237.1-201ENST00000415016 335 ntBASIC2.69□□□□□ -1.98
CDH11P55287 RPL7P10-201ENST00000417407 739 ntBASIC2.69□□□□□ -1.98
CDH11P55287 COTL1P1-201ENST00000422309 375 ntBASIC2.69□□□□□ -1.98
CDH11P55287 AL365496.1-201ENST00000426885 215 ntBASIC2.69□□□□□ -1.98
CDH11P55287 ERLEC1P1-201ENST00000433806 578 ntBASIC2.69□□□□□ -1.98
CDH11P55287 ITCH-AS1-201ENST00000454205 299 ntTSL 5 BASIC2.69□□□□□ -1.98
CDH11P55287 DYNLL1P5-201ENST00000467158 270 ntBASIC2.69□□□□□ -1.98
CDH11P55287 S100A11P2-201ENST00000467589 312 ntBASIC2.69□□□□□ -1.98
CDH11P55287 OARD1-209ENST00000471367 401 ntTSL 2 BASIC2.69□□□□□ -1.98
CDH11P55287 TRBV1-201ENST00000476502 284 ntBASIC2.69□□□□□ -1.98
CDH11P55287 RPL21P99-201ENST00000480369 423 ntBASIC2.69□□□□□ -1.98
CDH11P55287 RN7SL499P-201ENST00000481141 276 ntBASIC2.69□□□□□ -1.98
CDH11P55287 AC116353.2-201ENST00000505332 712 ntBASIC2.69□□□□□ -1.98
CDH11P55287 LINC01333-201ENST00000508083 724 ntTSL 1 (best) BASIC2.69□□□□□ -1.98
CDH11P55287 AC145146.2-202ENST00000508118 326 ntTSL 3 BASIC2.69□□□□□ -1.98
CDH11P55287 AC098799.2-201ENST00000509466 868 ntBASIC2.69□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 108.4 ms