Protein–RNA interactions for Protein: P54278

PMS2, Mismatch repair endonuclease PMS2, humanhuman

Predictions only

Length 862 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PMS2P54278 AC006028.1-201ENST00000438379 402 ntBASIC3.21□□□□□ -1.9
PMS2P54278 AC092798.1-201ENST00000458542 409 ntBASIC3.21□□□□□ -1.9
PMS2P54278 RNU6-953P-201ENST00000459154 107 ntBASIC3.21□□□□□ -1.9
PMS2P54278 AC012081.1-201ENST00000462382 477 ntTSL 3 BASIC3.21□□□□□ -1.9
PMS2P54278 Y_RNA.654-201ENST00000497848 106 ntBASIC3.21□□□□□ -1.9
PMS2P54278 MTCO3P9-201ENST00000506989 781 ntBASIC3.21□□□□□ -1.9
PMS2P54278 MEPE-206ENST00000511670 550 ntTSL 4 BASIC3.21□□□□□ -1.9
PMS2P54278 RNU6-677P-201ENST00000516914 101 ntBASIC3.21□□□□□ -1.9
PMS2P54278 AC104237.1-201ENST00000527443 539 ntTSL 4 BASIC3.21□□□□□ -1.9
PMS2P54278 AP000867.2-201ENST00000532468 320 ntBASIC3.21□□□□□ -1.9
PMS2P54278 AC026765.1-201ENST00000547876 435 ntTSL 3 BASIC3.21□□□□□ -1.9
PMS2P54278 G2E3-AS1-202ENST00000550118 609 ntTSL 5 BASIC3.21□□□□□ -1.9
PMS2P54278 AL118558.2-201ENST00000556294 238 ntBASIC3.21□□□□□ -1.9
PMS2P54278 MTCO3P23-201ENST00000561363 289 ntBASIC3.21□□□□□ -1.9
PMS2P54278 MIR2682-201ENST00000580305 110 ntBASIC3.21□□□□□ -1.9
PMS2P54278 MIR4276-201ENST00000584832 70 ntBASIC3.21□□□□□ -1.9
PMS2P54278 AC107294.1-201ENST00000609524 467 ntBASIC3.21□□□□□ -1.9
PMS2P54278 AL359547.2-201ENST00000615810 418 ntBASIC3.21□□□□□ -1.9
PMS2P54278 AC022140.2-201ENST00000623500 188 ntBASIC3.21□□□□□ -1.9
PMS2P54278 AC073308.1-201ENST00000623696 305 ntBASIC3.21□□□□□ -1.9
PMS2P54278 AL109837.2-201ENST00000632608 295 ntTSL 3 BASIC3.21□□□□□ -1.9
PMS2P54278 AC215522.3-201ENST00000635602 354 ntTSL 5 BASIC3.21□□□□□ -1.9
PMS2P54278 CHD9-203ENST00000447540 11509 ntTSL 5 BASIC3.21□□□□□ -1.9
PMS2P54278 MTND4P29-201ENST00000503122 1372 ntBASIC3.21□□□□□ -1.9
PMS2P54278 VSTM2A-OT1-201ENST00000456049 3031 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
PMS2P54278 SPEF2-203ENST00000440995 5964 ntAPPRIS ALT2 TSL 5 BASIC3.21□□□□□ -1.9
PMS2P54278 GRAMD1C-202ENST00000440446 3475 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
PMS2P54278 FAM46D-201ENST00000308293 3011 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
PMS2P54278 S100A12-201ENST00000368737 518 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
PMS2P54278 Y_RNA.399-201ENST00000383955 105 ntBASIC3.2□□□□□ -1.9
PMS2P54278 RNU6-1127P-201ENST00000384580 107 ntBASIC3.2□□□□□ -1.9
PMS2P54278 Y_RNA.529-201ENST00000384586 119 ntBASIC3.2□□□□□ -1.9
PMS2P54278 Y_RNA.530-201ENST00000384587 101 ntBASIC3.2□□□□□ -1.9
PMS2P54278 AL122016.1-201ENST00000403365 367 ntBASIC3.2□□□□□ -1.9
PMS2P54278 AL139397.2-201ENST00000404529 772 ntBASIC3.2□□□□□ -1.9
PMS2P54278 ELF3-AS1-201ENST00000415582 500 ntTSL 2 BASIC3.2□□□□□ -1.9
PMS2P54278 NCOR1P3-201ENST00000420479 303 ntBASIC3.2□□□□□ -1.9
PMS2P54278 AL591704.1-201ENST00000432574 275 ntBASIC3.2□□□□□ -1.9
PMS2P54278 AL359706.1-201ENST00000437748 315 ntTSL 3 BASIC3.2□□□□□ -1.9
PMS2P54278 AL137789.1-201ENST00000439443 682 ntTSL 3 BASIC3.2□□□□□ -1.9
PMS2P54278 AL020998.1-201ENST00000444923 229 ntTSL 3 BASIC3.2□□□□□ -1.9
PMS2P54278 MCHR2-AS1-203ENST00000451220 429 ntTSL 3 BASIC3.2□□□□□ -1.9
PMS2P54278 AC010099.1-201ENST00000455434 375 ntBASIC3.2□□□□□ -1.9
PMS2P54278 SCARNA18-201ENST00000459004 134 ntBASIC3.2□□□□□ -1.9
PMS2P54278 AC092919.1-201ENST00000467896 229 ntTSL 2 BASIC3.2□□□□□ -1.9
PMS2P54278 AL049873.1-201ENST00000480540 376 ntBASIC3.2□□□□□ -1.9
PMS2P54278 AP004217.1-201ENST00000480579 346 ntBASIC3.2□□□□□ -1.9
PMS2P54278 RN7SL504P-201ENST00000494496 287 ntBASIC3.2□□□□□ -1.9
PMS2P54278 AC110794.1-201ENST00000505816 425 ntBASIC3.2□□□□□ -1.9
PMS2P54278 AC008539.1-201ENST00000507653 482 ntTSL 3 BASIC3.2□□□□□ -1.9
PMS2P54278 AC016556.1-201ENST00000510004 935 ntTSL 2 BASIC3.2□□□□□ -1.9
PMS2P54278 LINC02122-201ENST00000511395 577 ntTSL 4 BASIC3.2□□□□□ -1.9
PMS2P54278 RNU6-123P-201ENST00000516163 102 ntBASIC3.2□□□□□ -1.9
PMS2P54278 Y_RNA.689-201ENST00000516589 107 ntBASIC3.2□□□□□ -1.9
PMS2P54278 RNU7-30P-201ENST00000516835 62 ntBASIC3.2□□□□□ -1.9
PMS2P54278 RNU6-928P-201ENST00000516876 104 ntBASIC3.2□□□□□ -1.9
PMS2P54278 RPL7P20-201ENST00000520308 745 ntBASIC3.2□□□□□ -1.9
PMS2P54278 AC021698.1-201ENST00000524858 716 ntTSL 3 BASIC3.2□□□□□ -1.9
PMS2P54278 OR11H5P-201ENST00000554039 926 ntBASIC3.2□□□□□ -1.9
PMS2P54278 MIR5004-201ENST00000579078 107 ntBASIC3.2□□□□□ -1.9
PMS2P54278 TTN-AS1-212ENST00000582847 1036 ntTSL 5 BASIC3.2□□□□□ -1.9
PMS2P54278 MIR4298-201ENST00000584380 73 ntBASIC3.2□□□□□ -1.9
PMS2P54278 AC005357.2-201ENST00000586473 583 ntTSL 2 BASIC3.2□□□□□ -1.9
PMS2P54278 AL138889.2-201ENST00000603883 242 ntBASIC3.2□□□□□ -1.9
PMS2P54278 AC136601.2-201ENST00000604356 474 ntBASIC3.2□□□□□ -1.9
PMS2P54278 AC022017.1-201ENST00000608793 559 ntTSL 4 BASIC3.2□□□□□ -1.9
PMS2P54278 PLCZ1-209ENST00000539875 1398 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
PMS2P54278 RNA5SP374-201ENST00000362939 125 ntBASIC3.19□□□□□ -1.9
PMS2P54278 RNU4-73P-201ENST00000363164 141 ntBASIC3.19□□□□□ -1.9
PMS2P54278 RNU6-831P-201ENST00000384548 107 ntBASIC3.19□□□□□ -1.9
PMS2P54278 RNU6-140P-201ENST00000384566 108 ntBASIC3.19□□□□□ -1.9
PMS2P54278 Y_RNA.535-201ENST00000384612 99 ntBASIC3.19□□□□□ -1.9
PMS2P54278 U3.26-201ENST00000391236 204 ntBASIC3.19□□□□□ -1.9
PMS2P54278 UBA52P6-201ENST00000399822 382 ntBASIC3.19□□□□□ -1.9
PMS2P54278 RNA5SP274-201ENST00000410484 108 ntBASIC3.19□□□□□ -1.9
PMS2P54278 AC009411.1-202ENST00000412424 548 ntTSL 4 BASIC3.19□□□□□ -1.9
PMS2P54278 USP9YP20-201ENST00000419224 558 ntBASIC3.19□□□□□ -1.9
PMS2P54278 AL365400.1-201ENST00000431854 640 ntBASIC3.19□□□□□ -1.9
PMS2P54278 AC005160.1-201ENST00000432405 381 ntTSL 3 BASIC3.19□□□□□ -1.9
PMS2P54278 AC093579.1-201ENST00000439455 352 ntTSL 2 BASIC3.19□□□□□ -1.9
PMS2P54278 AL035634.1-201ENST00000446768 372 ntTSL 2 BASIC3.19□□□□□ -1.9
PMS2P54278 RNU7-66P-201ENST00000459469 62 ntBASIC3.19□□□□□ -1.9
PMS2P54278 AP001486.1-201ENST00000463339 476 ntBASIC3.19□□□□□ -1.9
PMS2P54278 AC104472.2-201ENST00000469035 601 ntBASIC3.19□□□□□ -1.9
PMS2P54278 AC069528.1-201ENST00000490344 705 ntTSL 3 BASIC3.19□□□□□ -1.9
PMS2P54278 Y_RNA.691-201ENST00000516611 103 ntBASIC3.19□□□□□ -1.9
PMS2P54278 AC114550.2-201ENST00000524008 397 ntTSL 3 BASIC3.19□□□□□ -1.9
PMS2P54278 LINC02350-201ENST00000544419 480 ntTSL 3 BASIC3.19□□□□□ -1.9
PMS2P54278 GLYCAM1-201ENST00000546596 285 ntBASIC3.19□□□□□ -1.9
PMS2P54278 AC009754.1-201ENST00000566282 540 ntTSL 4 BASIC3.19□□□□□ -1.9
PMS2P54278 AF001550.1-201ENST00000572747 573 ntTSL 4 BASIC3.19□□□□□ -1.9
PMS2P54278 MIR4742-201ENST00000581069 85 ntBASIC3.19□□□□□ -1.9
PMS2P54278 AC127024.3-201ENST00000582841 460 ntTSL 3 BASIC3.19□□□□□ -1.9
PMS2P54278 AC012119.1-201ENST00000603184 222 ntBASIC3.19□□□□□ -1.9
PMS2P54278 AC079610.3-201ENST00000606960 147 ntTSL 3 BASIC3.19□□□□□ -1.9
PMS2P54278 AL022345.1-201ENST00000607292 135 ntBASIC3.19□□□□□ -1.9
PMS2P54278 AC092807.2-201ENST00000609367 243 ntBASIC3.19□□□□□ -1.9
PMS2P54278 AL132765.2-201ENST00000610812 351 ntBASIC3.19□□□□□ -1.9
PMS2P54278 uc_338.5-201ENST00000611839 155 ntBASIC3.19□□□□□ -1.9
PMS2P54278 AC112487.2-201ENST00000637950 304 ntBASIC3.19□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 159.3 ms