Protein–RNA interactions for Protein: P53621

COPA, Coatomer subunit alpha, humanhuman

Predictions only

Length 1,224 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPAP53621 AC011471.1-201ENST00000585766 187 ntBASIC3.46□□□□□ -1.86
COPAP53621 RPL23AP78-201ENST00000599928 470 ntBASIC3.46□□□□□ -1.86
COPAP53621 AC006557.5-201ENST00000603126 811 ntBASIC3.46□□□□□ -1.86
COPAP53621 AL355598.1-201ENST00000604169 202 ntBASIC3.46□□□□□ -1.86
COPAP53621 CTHRC1P1-201ENST00000605383 469 ntBASIC3.46□□□□□ -1.86
COPAP53621 MIR4458HG-202ENST00000605918 1057 ntTSL 1 (best) BASIC3.46□□□□□ -1.86
COPAP53621 AC022017.1-201ENST00000608793 559 ntTSL 4 BASIC3.46□□□□□ -1.86
COPAP53621 HTN1-205ENST00000610341 536 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
COPAP53621 AL359314.1-201ENST00000616913 261 ntBASIC3.46□□□□□ -1.86
COPAP53621 AC244517.5-202ENST00000623741 500 ntTSL 3 BASIC3.46□□□□□ -1.86
COPAP53621 CYP3A43-217ENST00000631161 328 ntTSL 5 BASIC3.46□□□□□ -1.86
COPAP53621 TMPRSS11A-202ENST00000508048 3247 ntAPPRIS ALT2 TSL 1 (best) BASIC3.46□□□□□ -1.86
COPAP53621 MT-ND5-201ENST00000361567 1812 ntAPPRIS P1 BASIC3.46□□□□□ -1.86
COPAP53621 AC099654.7-201ENST00000635788 2127 ntBASIC3.46□□□□□ -1.86
COPAP53621 PTBP2-211ENST00000609116 12014 ntAPPRIS ALT1 TSL 1 (best) BASIC3.46□□□□□ -1.86
COPAP53621 EVI2A-201ENST00000247270 1860 ntAPPRIS P3 TSL 2 BASIC3.45□□□□□ -1.86
COPAP53621 N4BP2L2-211ENST00000504114 2513 ntTSL 5 BASIC3.45□□□□□ -1.86
COPAP53621 LIPI-203ENST00000536861 1529 ntAPPRIS ALT2 TSL 1 (best) BASIC3.45□□□□□ -1.86
COPAP53621 LPP-220ENST00000617246 18220 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
COPAP53621 SLC39A10-202ENST00000409086 5432 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
COPAP53621 Y_RNA.167-201ENST00000363735 109 ntBASIC3.45□□□□□ -1.86
COPAP53621 SNORA38.1-201ENST00000364172 131 ntBASIC3.45□□□□□ -1.86
COPAP53621 RNU6-1303P-201ENST00000364841 107 ntBASIC3.45□□□□□ -1.86
COPAP53621 SNORA75B-201ENST00000384053 137 ntBASIC3.45□□□□□ -1.86
COPAP53621 U3.19-201ENST00000390893 196 ntBASIC3.45□□□□□ -1.86
COPAP53621 SNORA48.2-201ENST00000390926 124 ntBASIC3.45□□□□□ -1.86
COPAP53621 RNA5SP252-201ENST00000391131 119 ntBASIC3.45□□□□□ -1.86
COPAP53621 NT5C3A-205ENST00000409467 1032 ntAPPRIS ALT1 TSL 5 BASIC3.45□□□□□ -1.86
COPAP53621 AL162726.4-201ENST00000422010 673 ntTSL 5 BASIC3.45□□□□□ -1.86
COPAP53621 PLCE1-AS2-203ENST00000433038 396 ntTSL 2 BASIC3.45□□□□□ -1.86
COPAP53621 MRPL50P4-201ENST00000446432 475 ntBASIC3.45□□□□□ -1.86
COPAP53621 AC125238.1-201ENST00000448842 249 ntBASIC3.45□□□□□ -1.86
COPAP53621 AL583843.1-201ENST00000456070 346 ntBASIC3.45□□□□□ -1.86
COPAP53621 HMGN1P18-201ENST00000457642 277 ntBASIC3.45□□□□□ -1.86
COPAP53621 TRBVA-201ENST00000498804 316 ntBASIC3.45□□□□□ -1.86
COPAP53621 AC103851.1-201ENST00000506833 274 ntBASIC3.45□□□□□ -1.86
COPAP53621 LINC02269-201ENST00000509968 511 ntTSL 3 BASIC3.45□□□□□ -1.86
COPAP53621 RNU1-103P-201ENST00000516502 125 ntBASIC3.45□□□□□ -1.86
COPAP53621 SNORA70.19-201ENST00000516717 90 ntBASIC3.45□□□□□ -1.86
COPAP53621 FAM92A-209ENST00000519679 538 ntTSL 4 BASIC3.45□□□□□ -1.86
COPAP53621 AC090136.1-201ENST00000520009 240 ntBASIC3.45□□□□□ -1.86
COPAP53621 AP000867.2-201ENST00000532468 320 ntBASIC3.45□□□□□ -1.86
COPAP53621 H3F3AP1-201ENST00000559984 334 ntBASIC3.45□□□□□ -1.86
COPAP53621 AC026464.5-201ENST00000562497 722 ntBASIC3.45□□□□□ -1.86
COPAP53621 AC011939.2-201ENST00000567396 428 ntTSL 3 BASIC3.45□□□□□ -1.86
COPAP53621 AC015911.6-201ENST00000588445 457 ntTSL 3 BASIC3.45□□□□□ -1.86
COPAP53621 AC012493.2-201ENST00000595083 291 ntBASIC3.45□□□□□ -1.86
COPAP53621 AL117336.2-201ENST00000602435 335 ntBASIC3.45□□□□□ -1.86
COPAP53621 AC007938.3-201ENST00000604965 623 ntBASIC3.45□□□□□ -1.86
COPAP53621 AL031601.2-202ENST00000622650 282 ntBASIC3.45□□□□□ -1.86
COPAP53621 OR4C16-201ENST00000623907 933 ntAPPRIS P1 BASIC3.45□□□□□ -1.86
COPAP53621 TPTEP1-208ENST00000636884 213 ntBASIC3.45□□□□□ -1.86
COPAP53621 HERC5-203ENST00000508159 2243 ntTSL 2 BASIC3.45□□□□□ -1.86
COPAP53621 ZNF804A-202ENST00000613975 3986 ntTSL 5 BASIC3.44□□□□□ -1.86
COPAP53621 VPS13C-203ENST00000395896 14579 ntAPPRIS ALT2 TSL 1 (best) BASIC3.44□□□□□ -1.86
COPAP53621 SNORD3E-201ENST00000362899 217 ntBASIC3.44□□□□□ -1.86
COPAP53621 Y_RNA.480-201ENST00000384364 102 ntBASIC3.44□□□□□ -1.86
COPAP53621 MIR888-201ENST00000401186 77 ntBASIC3.44□□□□□ -1.86
COPAP53621 NDUFB4P4-201ENST00000404822 243 ntBASIC3.44□□□□□ -1.86
COPAP53621 RNA5SP293-201ENST00000410527 113 ntBASIC3.44□□□□□ -1.86
COPAP53621 AL353621.1-201ENST00000418219 243 ntBASIC3.44□□□□□ -1.86
COPAP53621 AC245291.1-201ENST00000419501 328 ntBASIC3.44□□□□□ -1.86
COPAP53621 AC098614.2-201ENST00000426040 255 ntBASIC3.44□□□□□ -1.86
COPAP53621 MYL8P-204ENST00000431574 518 ntBASIC3.44□□□□□ -1.86
COPAP53621 BRK1P2-201ENST00000442875 223 ntBASIC3.44□□□□□ -1.86
COPAP53621 Z75741.1-201ENST00000446793 314 ntBASIC3.44□□□□□ -1.86
COPAP53621 RPL37P4-201ENST00000448908 268 ntBASIC3.44□□□□□ -1.86
COPAP53621 RPS27P29-201ENST00000463110 252 ntBASIC3.44□□□□□ -1.86
COPAP53621 RPS29P2-201ENST00000479278 136 ntBASIC3.44□□□□□ -1.86
COPAP53621 AC092185.1-201ENST00000491371 97 ntBASIC3.44□□□□□ -1.86
COPAP53621 PLCXD2-AS1-201ENST00000493131 491 ntTSL 3 BASIC3.44□□□□□ -1.86
COPAP53621 AC096733.1-201ENST00000503844 402 ntTSL 3 BASIC3.44□□□□□ -1.86
COPAP53621 AC097467.1-201ENST00000513660 370 ntTSL 5 BASIC3.44□□□□□ -1.86
COPAP53621 SNORA14.1-201ENST00000516113 141 ntBASIC3.44□□□□□ -1.86
COPAP53621 MIR2276-201ENST00000516886 89 ntBASIC3.44□□□□□ -1.86
COPAP53621 AC006518.2-202ENST00000544947 297 ntTSL 2 BASIC3.44□□□□□ -1.86
COPAP53621 APAF1-207ENST00000547743 651 ntTSL 3 BASIC3.44□□□□□ -1.86
COPAP53621 SCOCP1-201ENST00000554676 349 ntBASIC3.44□□□□□ -1.86
COPAP53621 AC007598.2-201ENST00000569490 539 ntTSL 3 BASIC3.44□□□□□ -1.86
COPAP53621 LINC01897-203ENST00000591503 369 ntTSL 2 BASIC3.44□□□□□ -1.86
COPAP53621 C8orf59P2-201ENST00000603441 271 ntBASIC3.44□□□□□ -1.86
COPAP53621 AC021646.1-201ENST00000605469 484 ntBASIC3.44□□□□□ -1.86
COPAP53621 SMAD5-AS1_2.1-201ENST00000617906 131 ntBASIC3.44□□□□□ -1.86
COPAP53621 RMST_7.1-201ENST00000621935 268 ntBASIC3.44□□□□□ -1.86
COPAP53621 AC090617.7-201ENST00000623952 126 ntBASIC3.44□□□□□ -1.86
COPAP53621 AC215522.3-201ENST00000635602 354 ntTSL 5 BASIC3.44□□□□□ -1.86
COPAP53621 KCNH7-204ENST00000618399 3713 ntTSL 5 BASIC3.44□□□□□ -1.86
COPAP53621 KLRA1P-202ENST00000510134 1410 ntTSL 5 BASIC3.44□□□□□ -1.86
COPAP53621 RAPGEF6-202ENST00000308008 4176 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
COPAP53621 FAM214A-204ENST00000546305 3697 ntTSL 2 BASIC3.43□□□□□ -1.86
COPAP53621 MGAT4C-210ENST00000620241 3194 ntAPPRIS P1 TSL 2 BASIC3.43□□□□□ -1.86
COPAP53621 AKAP7-209ENST00000541650 2008 ntTSL 5 BASIC3.43□□□□□ -1.86
COPAP53621 Y_RNA.61-201ENST00000362835 102 ntBASIC3.43□□□□□ -1.86
COPAP53621 Y_RNA.529-201ENST00000384586 119 ntBASIC3.43□□□□□ -1.86
COPAP53621 RNU6-658P-201ENST00000384606 106 ntBASIC3.43□□□□□ -1.86
COPAP53621 SNORA40C-201ENST00000391285 128 ntBASIC3.43□□□□□ -1.86
COPAP53621 AL356057.2-201ENST00000403318 432 ntBASIC3.43□□□□□ -1.86
COPAP53621 AL122016.1-201ENST00000403365 367 ntBASIC3.43□□□□□ -1.86
COPAP53621 Y_RNA.623-201ENST00000411128 95 ntBASIC3.43□□□□□ -1.86
COPAP53621 AL136322.1-201ENST00000422250 548 ntTSL 4 BASIC3.43□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 102.3 ms