Protein–RNA interactions for Protein: P52945

PDX1, Pancreas/duodenum homeobox protein 1, humanhuman

Predictions only

Length 283 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDX1P52945 EFTUD1P2-201ENST00000514817 1603 ntBASIC2.72□□□□□ -1.97
PDX1P52945 MCF2-208ENST00000519895 3346 ntAPPRIS ALT2 TSL 2 BASIC2.72□□□□□ -1.97
PDX1P52945 ZNF334-205ENST00000615481 3706 ntAPPRIS ALT2 TSL 5 BASIC2.72□□□□□ -1.97
PDX1P52945 NACAP2-201ENST00000318548 624 ntBASIC2.72□□□□□ -1.97
PDX1P52945 ZBTB8OSP1-201ENST00000342688 498 ntBASIC2.72□□□□□ -1.97
PDX1P52945 RNU6-371P-201ENST00000364283 108 ntBASIC2.72□□□□□ -1.97
PDX1P52945 RNU4-20P-201ENST00000365601 151 ntBASIC2.72□□□□□ -1.97
PDX1P52945 MDM4-202ENST00000367180 547 ntTSL 3 BASIC2.72□□□□□ -1.97
PDX1P52945 CD24P4-201ENST00000382840 243 ntBASIC2.72□□□□□ -1.97
PDX1P52945 Y_RNA.450-201ENST00000384198 113 ntBASIC2.72□□□□□ -1.97
PDX1P52945 RNU6-166P-201ENST00000384371 107 ntBASIC2.72□□□□□ -1.97
PDX1P52945 Y_RNA.481-201ENST00000384373 102 ntBASIC2.72□□□□□ -1.97
PDX1P52945 SNORA40C-201ENST00000391285 128 ntBASIC2.72□□□□□ -1.97
PDX1P52945 PRKG1-205ENST00000401604 5922 ntTSL 5 BASIC2.72□□□□□ -1.97
PDX1P52945 AL139095.1-201ENST00000404326 391 ntBASIC2.72□□□□□ -1.97
PDX1P52945 RNU6-908P-201ENST00000410160 94 ntBASIC2.72□□□□□ -1.97
PDX1P52945 RN7SKP58-201ENST00000411010 305 ntBASIC2.72□□□□□ -1.97
PDX1P52945 AL109924.3-201ENST00000413324 393 ntTSL 2 BASIC2.72□□□□□ -1.97
PDX1P52945 GTF2IP20-201ENST00000431663 360 ntBASIC2.72□□□□□ -1.97
PDX1P52945 AC244505.4-201ENST00000434905 287 ntBASIC2.72□□□□□ -1.97
PDX1P52945 AF274573.2-201ENST00000437772 520 ntTSL 5 BASIC2.72□□□□□ -1.97
PDX1P52945 SSXP5-201ENST00000443473 287 ntBASIC2.72□□□□□ -1.97
PDX1P52945 AC069542.1-201ENST00000445235 557 ntTSL 3 BASIC2.72□□□□□ -1.97
PDX1P52945 AC092567.1-201ENST00000452397 251 ntTSL 3 BASIC2.72□□□□□ -1.97
PDX1P52945 AL583843.1-201ENST00000456070 346 ntBASIC2.72□□□□□ -1.97
PDX1P52945 AC114786.4-201ENST00000508771 728 ntBASIC2.72□□□□□ -1.97
PDX1P52945 AC034223.1-201ENST00000511054 599 ntTSL 3 BASIC2.72□□□□□ -1.97
PDX1P52945 AC114781.4-201ENST00000513707 639 ntBASIC2.72□□□□□ -1.97
PDX1P52945 RNA5SP401-201ENST00000515920 127 ntBASIC2.72□□□□□ -1.97
PDX1P52945 SUB1P1-201ENST00000524415 382 ntBASIC2.72□□□□□ -1.97
PDX1P52945 AC092747.1-202ENST00000540595 380 ntTSL 5 BASIC2.72□□□□□ -1.97
PDX1P52945 CERS3-AS1-201ENST00000560643 372 ntTSL 3 BASIC2.72□□□□□ -1.97
PDX1P52945 LINC01900-203ENST00000585185 393 ntTSL 3 BASIC2.72□□□□□ -1.97
PDX1P52945 YWHAEP7-203ENST00000622054 312 ntBASIC2.72□□□□□ -1.97
PDX1P52945 AC002064.3-201ENST00000623448 346 ntBASIC2.72□□□□□ -1.97
PDX1P52945 MIR1321-201ENST00000637766 79 ntBASIC2.72□□□□□ -1.97
PDX1P52945 ARHGAP5-202ENST00000345122 9604 ntAPPRIS P3 TSL 5 BASIC2.72□□□□□ -1.97
PDX1P52945 HERC5-203ENST00000508159 2243 ntTSL 2 BASIC2.72□□□□□ -1.97
PDX1P52945 MUC15-205ENST00000529533 2084 ntTSL 1 (best) BASIC2.72□□□□□ -1.97
PDX1P52945 ATP11C-201ENST00000327569 6115 ntAPPRIS P3 TSL 1 (best) BASIC2.71□□□□□ -1.97
PDX1P52945 AC110774.1-201ENST00000623567 2018 ntBASIC2.71□□□□□ -1.98
PDX1P52945 RAPGEF6-210ENST00000512052 3535 ntTSL 2 BASIC2.71□□□□□ -1.98
PDX1P52945 ANKRD36BP1-202ENST00000604892 1417 ntBASIC2.71□□□□□ -1.98
PDX1P52945 Y_RNA.38-201ENST00000362617 102 ntBASIC2.71□□□□□ -1.98
PDX1P52945 RNU1-112P-201ENST00000364401 164 ntBASIC2.71□□□□□ -1.98
PDX1P52945 Y_RNA.256-201ENST00000364594 104 ntBASIC2.71□□□□□ -1.98
PDX1P52945 RNU6-1303P-201ENST00000364841 107 ntBASIC2.71□□□□□ -1.98
PDX1P52945 SNORA16.2-201ENST00000390991 127 ntBASIC2.71□□□□□ -1.98
PDX1P52945 SAR1AP2-201ENST00000392696 594 ntBASIC2.71□□□□□ -1.98
PDX1P52945 CIR1P3-201ENST00000405137 479 ntBASIC2.71□□□□□ -1.98
PDX1P52945 RNU6-1068P-201ENST00000410958 103 ntBASIC2.71□□□□□ -1.98
PDX1P52945 AC023141.4-201ENST00000412031 328 ntBASIC2.71□□□□□ -1.98
PDX1P52945 RPL21P90-201ENST00000415692 466 ntBASIC2.71□□□□□ -1.98
PDX1P52945 USP9YP27-201ENST00000418455 438 ntBASIC2.71□□□□□ -1.98
PDX1P52945 BPY2DP-201ENST00000422208 265 ntBASIC2.71□□□□□ -1.98
PDX1P52945 MTCO1P20-201ENST00000425366 358 ntBASIC2.71□□□□□ -1.98
PDX1P52945 AC007560.1-201ENST00000426912 237 ntBASIC2.71□□□□□ -1.98
PDX1P52945 RAB6C-AS1-202ENST00000433431 123 ntBASIC2.71□□□□□ -1.98
PDX1P52945 AL035258.1-201ENST00000439450 439 ntTSL 3 BASIC2.71□□□□□ -1.98
PDX1P52945 LINC01162-201ENST00000447262 447 ntTSL 5 BASIC2.71□□□□□ -1.98
PDX1P52945 RPS15AP27-201ENST00000449183 343 ntBASIC2.71□□□□□ -1.98
PDX1P52945 AL365295.1-201ENST00000454942 514 ntTSL 5 BASIC2.71□□□□□ -1.98
PDX1P52945 RNU7-23P-201ENST00000459465 62 ntBASIC2.71□□□□□ -1.98
PDX1P52945 AC006483.1-201ENST00000487308 313 ntBASIC2.71□□□□□ -1.98
PDX1P52945 RNU6-1178P-201ENST00000516674 107 ntBASIC2.71□□□□□ -1.98
PDX1P52945 RNU6-1183P-201ENST00000517054 60 ntBASIC2.71□□□□□ -1.98
PDX1P52945 MTND1P5-201ENST00000517906 940 ntBASIC2.71□□□□□ -1.98
PDX1P52945 AC022360.2-201ENST00000522390 456 ntTSL 3 BASIC2.71□□□□□ -1.98
PDX1P52945 AC109635.3-201ENST00000529536 185 ntBASIC2.71□□□□□ -1.98
PDX1P52945 BNIP3P6-201ENST00000549284 499 ntBASIC2.71□□□□□ -1.98
PDX1P52945 AL157687.1-201ENST00000554853 619 ntBASIC2.71□□□□□ -1.98
PDX1P52945 AL512791.1-201ENST00000555853 300 ntTSL 3 BASIC2.71□□□□□ -1.98
PDX1P52945 AC025043.1-201ENST00000558047 625 ntTSL 2 BASIC2.71□□□□□ -1.98
PDX1P52945 LINC01482-203ENST00000589610 468 ntTSL 3 BASIC2.71□□□□□ -1.98
PDX1P52945 AC012254.1-201ENST00000592747 200 ntTSL 3 BASIC2.71□□□□□ -1.98
PDX1P52945 AC078899.3-201ENST00000599065 212 ntBASIC2.71□□□□□ -1.98
PDX1P52945 AL161629.2-201ENST00000615347 275 ntBASIC2.71□□□□□ -1.98
PDX1P52945 uc_338.11-201ENST00000619132 160 ntBASIC2.71□□□□□ -1.98
PDX1P52945 AC243829.7-201ENST00000633081 225 ntBASIC2.71□□□□□ -1.98
PDX1P52945 MIR3688-2-201ENST00000636963 87 ntBASIC2.71□□□□□ -1.98
PDX1P52945 U6.99-201ENST00000637524 83 ntBASIC2.71□□□□□ -1.98
PDX1P52945 USP45-208ENST00000500704 5826 ntAPPRIS P1 TSL 5 BASIC2.71□□□□□ -1.98
PDX1P52945 SLC6A15-202ENST00000309283 3108 ntTSL 5 BASIC2.71□□□□□ -1.98
PDX1P52945 PLS1-201ENST00000337777 3755 ntAPPRIS P1 TSL 1 (best) BASIC2.71□□□□□ -1.98
PDX1P52945 ASNSP3-201ENST00000451989 1306 ntBASIC2.7□□□□□ -1.98
PDX1P52945 AC093536.2-201ENST00000565257 1406 ntBASIC2.7□□□□□ -1.98
PDX1P52945 CBLL1-201ENST00000222597 2003 ntAPPRIS ALT1 TSL 1 (best) BASIC2.7□□□□□ -1.98
PDX1P52945 Y_RNA.9-201ENST00000362354 101 ntBASIC2.7□□□□□ -1.98
PDX1P52945 RNU6-451P-201ENST00000362921 107 ntBASIC2.7□□□□□ -1.98
PDX1P52945 RNU6-1179P-201ENST00000384667 107 ntBASIC2.7□□□□□ -1.98
PDX1P52945 AP003170.3-201ENST00000399123 158 ntTSL 5 BASIC2.7□□□□□ -1.98
PDX1P52945 RNU2-49P-201ENST00000410666 184 ntBASIC2.7□□□□□ -1.98
PDX1P52945 NDUFS5P4-201ENST00000412983 318 ntBASIC2.7□□□□□ -1.98
PDX1P52945 AL451074.5-201ENST00000415894 435 ntBASIC2.7□□□□□ -1.98
PDX1P52945 USP9YP18-201ENST00000425912 695 ntBASIC2.7□□□□□ -1.98
PDX1P52945 AL365496.1-201ENST00000426885 215 ntBASIC2.7□□□□□ -1.98
PDX1P52945 ARL5AP4-201ENST00000430731 512 ntBASIC2.7□□□□□ -1.98
PDX1P52945 RPS15AP5-201ENST00000436276 388 ntBASIC2.7□□□□□ -1.98
PDX1P52945 BRK1P2-201ENST00000442875 223 ntBASIC2.7□□□□□ -1.98
PDX1P52945 AL078601.1-201ENST00000444542 271 ntBASIC2.7□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 122.2 ms