Protein–RNA interactions for Protein: P49238

CX3CR1, CX3C chemokine receptor 1, humanhuman

Predictions only

Length 355 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CR1P49238 RNU6-1220P-201ENST00000517126 108 ntBASIC1.87□□□□□ -2.11
CX3CR1P49238 RNU6-1315P-201ENST00000517187 99 ntBASIC1.87□□□□□ -2.11
CX3CR1P49238 RNU2-19P-201ENST00000517288 84 ntBASIC1.87□□□□□ -2.11
CX3CR1P49238 AC021785.1-201ENST00000520780 453 ntTSL 3 BASIC1.87□□□□□ -2.11
CX3CR1P49238 AC060788.1-201ENST00000521318 469 ntBASIC1.87□□□□□ -2.11
CX3CR1P49238 AC011611.4-201ENST00000547721 779 ntTSL 2 BASIC1.87□□□□□ -2.11
CX3CR1P49238 POC1B-211ENST00000549504 581 ntTSL 5 BASIC1.87□□□□□ -2.11
CX3CR1P49238 AL358333.2-201ENST00000556834 529 ntTSL 5 BASIC1.87□□□□□ -2.11
CX3CR1P49238 MIR3915-201ENST00000578518 97 ntBASIC1.87□□□□□ -2.11
CX3CR1P49238 AP005057.1-201ENST00000583827 574 ntTSL 4 BASIC1.87□□□□□ -2.11
CX3CR1P49238 AC007229.1-201ENST00000590455 412 ntBASIC1.87□□□□□ -2.11
CX3CR1P49238 AC012065.4-201ENST00000602445 679 ntBASIC1.87□□□□□ -2.11
CX3CR1P49238 AL031775.1-201ENST00000607014 887 ntBASIC1.87□□□□□ -2.11
CX3CR1P49238 AC120349.3-201ENST00000624377 529 ntBASIC1.87□□□□□ -2.11
CX3CR1P49238 AC010149.2-201ENST00000637608 315 ntBASIC1.87□□□□□ -2.11
CX3CR1P49238 AL160287.1-202ENST00000638113 454 ntTSL 5 BASIC1.87□□□□□ -2.11
CX3CR1P49238 CGGBP1-202ENST00000398392 5298 ntAPPRIS P1 BASIC1.87□□□□□ -2.11
CX3CR1P49238 ATP8A2P3-201ENST00000426792 1536 ntBASIC1.86□□□□□ -2.11
CX3CR1P49238 ZNF658B-202ENST00000615961 3375 ntBASIC1.86□□□□□ -2.11
CX3CR1P49238 RNA5SP138-201ENST00000365098 114 ntBASIC1.86□□□□□ -2.11
CX3CR1P49238 RNU5E-5P-201ENST00000365379 116 ntBASIC1.86□□□□□ -2.11
CX3CR1P49238 RNU6-166P-201ENST00000384371 107 ntBASIC1.86□□□□□ -2.11
CX3CR1P49238 MIR17-201ENST00000385012 84 ntBASIC1.86□□□□□ -2.11
CX3CR1P49238 TRAJ49-201ENST00000390488 56 ntAPPRIS P1 BASIC1.86□□□□□ -2.11
CX3CR1P49238 AL031577.2-201ENST00000404133 280 ntBASIC1.86□□□□□ -2.11
CX3CR1P49238 FTH1P15-201ENST00000406984 280 ntBASIC1.86□□□□□ -2.11
CX3CR1P49238 MARCH7-203ENST00000409591 2147 ntTSL 2 BASIC1.86□□□□□ -2.11
CX3CR1P49238 RNU4-53P-201ENST00000410828 140 ntBASIC1.86□□□□□ -2.11
CX3CR1P49238 AC104777.3-201ENST00000416350 545 ntTSL 3 BASIC1.86□□□□□ -2.11
CX3CR1P49238 RPS15AP12-201ENST00000419498 388 ntBASIC1.86□□□□□ -2.11
CX3CR1P49238 GS1-594A7.3-201ENST00000421585 574 ntTSL 2 BASIC1.86□□□□□ -2.11
CX3CR1P49238 AL589872.1-201ENST00000426602 288 ntBASIC1.86□□□□□ -2.11
CX3CR1P49238 AL592466.1-201ENST00000428346 307 ntTSL 5 BASIC1.86□□□□□ -2.11
CX3CR1P49238 SRIP2-201ENST00000428470 166 ntBASIC1.86□□□□□ -2.11
CX3CR1P49238 AL353612.1-201ENST00000428769 465 ntTSL 3 BASIC1.86□□□□□ -2.11
CX3CR1P49238 AC093423.2-201ENST00000429074 437 ntTSL 3 BASIC1.86□□□□□ -2.11
CX3CR1P49238 RPL22P17-201ENST00000438729 315 ntBASIC1.86□□□□□ -2.11
CX3CR1P49238 GPM6BP3-201ENST00000442797 145 ntBASIC1.86□□□□□ -2.11
CX3CR1P49238 TAF9P1-201ENST00000445421 515 ntBASIC1.86□□□□□ -2.11
CX3CR1P49238 TAF9P2-201ENST00000454958 515 ntBASIC1.86□□□□□ -2.11
CX3CR1P49238 BZW1P2-201ENST00000473537 826 ntBASIC1.86□□□□□ -2.11
CX3CR1P49238 RPL30P6-201ENST00000475925 342 ntBASIC1.86□□□□□ -2.11
CX3CR1P49238 RPL7P43-201ENST00000478876 753 ntBASIC1.86□□□□□ -2.11
CX3CR1P49238 AC107032.1-201ENST00000485945 480 ntBASIC1.86□□□□□ -2.11
CX3CR1P49238 AC079943.2-201ENST00000488999 716 ntTSL 3 BASIC1.86□□□□□ -2.11
CX3CR1P49238 AC112204.1-201ENST00000502591 103 ntBASIC1.86□□□□□ -2.11
CX3CR1P49238 AC109927.2-201ENST00000506416 303 ntBASIC1.86□□□□□ -2.11
CX3CR1P49238 AC092436.2-201ENST00000515188 411 ntTSL 2 BASIC1.86□□□□□ -2.11
CX3CR1P49238 OR5B19P-201ENST00000531766 928 ntBASIC1.86□□□□□ -2.11
CX3CR1P49238 MIR1273C-201ENST00000578669 77 ntBASIC1.86□□□□□ -2.11
CX3CR1P49238 AC023394.2-201ENST00000581987 792 ntTSL 5 BASIC1.86□□□□□ -2.11
CX3CR1P49238 AC063944.3-201ENST00000609969 533 ntBASIC1.86□□□□□ -2.11
CX3CR1P49238 AC092142.2-201ENST00000614642 354 ntTSL 3 BASIC1.86□□□□□ -2.11
CX3CR1P49238 AL162373.1-201ENST00000620433 407 ntBASIC1.86□□□□□ -2.11
CX3CR1P49238 MIR6873-201ENST00000622788 63 ntBASIC1.86□□□□□ -2.11
CX3CR1P49238 AF246928.1-201ENST00000623768 87 ntBASIC1.86□□□□□ -2.11
CX3CR1P49238 AC007494.3-201ENST00000624660 743 ntBASIC1.86□□□□□ -2.11
CX3CR1P49238 ATP13A3-201ENST00000256031 7322 ntAPPRIS P1 TSL 5 BASIC1.86□□□□□ -2.11
CX3CR1P49238 AKAP7-209ENST00000541650 2008 ntTSL 5 BASIC1.85□□□□□ -2.11
CX3CR1P49238 RNU5E-1-201ENST00000362477 120 ntBASIC1.85□□□□□ -2.11
CX3CR1P49238 SNORA75B-201ENST00000384053 137 ntBASIC1.85□□□□□ -2.11
CX3CR1P49238 Y_RNA.510-201ENST00000384511 114 ntBASIC1.85□□□□□ -2.11
CX3CR1P49238 STAP1-202ENST00000396225 1146 ntAPPRIS P1 TSL 1 (best) BASIC1.85□□□□□ -2.11
CX3CR1P49238 SNORA11.4-201ENST00000408823 129 ntBASIC1.85□□□□□ -2.11
CX3CR1P49238 MORN2-203ENST00000409131 544 ntTSL 5 BASIC1.85□□□□□ -2.11
CX3CR1P49238 AL356379.1-201ENST00000414105 126 ntBASIC1.85□□□□□ -2.11
CX3CR1P49238 EDNRB-AS1-201ENST00000422405 601 ntTSL 5 BASIC1.85□□□□□ -2.11
CX3CR1P49238 U51244.1-201ENST00000423120 374 ntTSL 3 BASIC1.85□□□□□ -2.11
CX3CR1P49238 AC241644.2-201ENST00000426504 480 ntTSL 3 BASIC1.85□□□□□ -2.11
CX3CR1P49238 OPA1-AS1-201ENST00000433105 492 ntTSL 3 BASIC1.85□□□□□ -2.11
CX3CR1P49238 AL359771.1-201ENST00000441809 379 ntTSL 5 BASIC1.85□□□□□ -2.11
CX3CR1P49238 AL118520.1-201ENST00000450770 291 ntBASIC1.85□□□□□ -2.11
CX3CR1P49238 MTND1P12-201ENST00000455231 147 ntBASIC1.85□□□□□ -2.11
CX3CR1P49238 AL137847.2-201ENST00000458111 527 ntTSL 3 BASIC1.85□□□□□ -2.11
CX3CR1P49238 AC117503.1-201ENST00000472241 394 ntBASIC1.85□□□□□ -2.11
CX3CR1P49238 LYRM7-202ENST00000507584 317 ntTSL 2 BASIC1.85□□□□□ -2.11
CX3CR1P49238 AL159163.1-201ENST00000507747 600 ntAPPRIS P1 TSL 5 BASIC1.85□□□□□ -2.11
CX3CR1P49238 AC110767.1-201ENST00000508374 239 ntTSL 3 BASIC1.85□□□□□ -2.11
CX3CR1P49238 AC016556.1-201ENST00000510004 935 ntTSL 2 BASIC1.85□□□□□ -2.11
CX3CR1P49238 SNORA4.4-201ENST00000515921 135 ntBASIC1.85□□□□□ -2.11
CX3CR1P49238 AC107953.1-201ENST00000522216 297 ntBASIC1.85□□□□□ -2.11
CX3CR1P49238 AC123905.1-201ENST00000552098 541 ntTSL 4 BASIC1.85□□□□□ -2.11
CX3CR1P49238 PSMA3P-201ENST00000555485 635 ntBASIC1.85□□□□□ -2.11
CX3CR1P49238 AL157871.3-201ENST00000557231 293 ntBASIC1.85□□□□□ -2.11
CX3CR1P49238 AC233702.2-202ENST00000562547 291 ntBASIC1.85□□□□□ -2.11
CX3CR1P49238 AC025678.1-201ENST00000567861 338 ntBASIC1.85□□□□□ -2.11
CX3CR1P49238 AL713866.2-201ENST00000603579 219 ntBASIC1.85□□□□□ -2.11
CX3CR1P49238 AC121334.2-201ENST00000605387 271 ntBASIC1.85□□□□□ -2.11
CX3CR1P49238 AC079610.3-201ENST00000606960 147 ntTSL 3 BASIC1.85□□□□□ -2.11
CX3CR1P49238 RNU6-91P-201ENST00000607774 107 ntBASIC1.85□□□□□ -2.11
CX3CR1P49238 AC091304.9-201ENST00000612091 226 ntBASIC1.85□□□□□ -2.11
CX3CR1P49238 AC010378.1-201ENST00000619270 362 ntBASIC1.85□□□□□ -2.11
CX3CR1P49238 ANKRD20A17P-201ENST00000511745 1330 ntBASIC1.85□□□□□ -2.11
CX3CR1P49238 SNX10-209ENST00000619420 2361 ntAPPRIS ALT1 TSL 5 BASIC1.85□□□□□ -2.11
CX3CR1P49238 MTND5P6-201ENST00000422338 1798 ntBASIC1.85□□□□□ -2.11
CX3CR1P49238 CHORDC1-205ENST00000529726 4805 ntTSL 2 BASIC1.84□□□□□ -2.11
CX3CR1P49238 PI15-201ENST00000260113 6732 ntAPPRIS P1 TSL 1 (best) BASIC1.84□□□□□ -2.11
CX3CR1P49238 Y_RNA.33-201ENST00000362591 102 ntBASIC1.84□□□□□ -2.11
CX3CR1P49238 RNU4-21P-201ENST00000362802 126 ntBASIC1.84□□□□□ -2.11
CX3CR1P49238 Y_RNA.169-201ENST00000363745 96 ntBASIC1.84□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 116.4 ms