Protein–RNA interactions for Protein: P48061

CXCL12, Stromal cell-derived factor 1, humanhuman

Predictions only

Length 93 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12P48061 AC008993.2-201ENST00000631744 806 ntBASIC1.84□□□□□ -2.11
CXCL12P48061 AC110491.1-201ENST00000562191 2010 ntBASIC1.84□□□□□ -2.12
CXCL12P48061 LINC00643-201ENST00000334389 3247 ntTSL 2 BASIC1.83□□□□□ -2.12
CXCL12P48061 AC004520.1-201ENST00000608362 1413 ntBASIC1.83□□□□□ -2.12
CXCL12P48061 MRPL42-202ENST00000393128 1983 ntAPPRIS ALT1 TSL 3 BASIC1.83□□□□□ -2.12
CXCL12P48061 AL596028.1-201ENST00000326971 197 ntBASIC1.83□□□□□ -2.12
CXCL12P48061 SMIM11P1-201ENST00000369586 178 ntBASIC1.83□□□□□ -2.12
CXCL12P48061 AL355497.1-201ENST00000406262 551 ntBASIC1.83□□□□□ -2.12
CXCL12P48061 FCF1P10-201ENST00000407590 479 ntBASIC1.83□□□□□ -2.12
CXCL12P48061 RPL26P27-201ENST00000414397 437 ntBASIC1.83□□□□□ -2.12
CXCL12P48061 RPS15AP12-201ENST00000419498 388 ntBASIC1.83□□□□□ -2.12
CXCL12P48061 MTND4P25-201ENST00000441039 533 ntBASIC1.83□□□□□ -2.12
CXCL12P48061 AL031659.1-201ENST00000447075 539 ntBASIC1.83□□□□□ -2.12
CXCL12P48061 AC010976.1-211ENST00000454503 644 ntTSL 2 BASIC1.83□□□□□ -2.12
CXCL12P48061 AC078980.1-201ENST00000485384 262 ntTSL 2 BASIC1.83□□□□□ -2.12
CXCL12P48061 UTP23-205ENST00000520733 369 ntTSL 3 BASIC1.83□□□□□ -2.12
CXCL12P48061 AHI1-212ENST00000528103 441 ntTSL 1 (best) BASIC1.83□□□□□ -2.12
CXCL12P48061 AP003181.2-201ENST00000528941 181 ntBASIC1.83□□□□□ -2.12
CXCL12P48061 AP003498.1-201ENST00000532530 347 ntTSL 3 BASIC1.83□□□□□ -2.12
CXCL12P48061 AP003086.2-201ENST00000534168 437 ntTSL 3 BASIC1.83□□□□□ -2.12
CXCL12P48061 AC093012.1-201ENST00000552999 446 ntTSL 3 BASIC1.83□□□□□ -2.12
CXCL12P48061 RPS3AP4-201ENST00000555161 764 ntBASIC1.83□□□□□ -2.12
CXCL12P48061 AC008015.1-201ENST00000555505 465 ntBASIC1.83□□□□□ -2.12
CXCL12P48061 AC002984.1-201ENST00000591692 448 ntBASIC1.83□□□□□ -2.12
CXCL12P48061 AC005261.5-201ENST00000596280 355 ntBASIC1.83□□□□□ -2.12
CXCL12P48061 AC018638.7-201ENST00000605836 1114 ntBASIC1.83□□□□□ -2.12
CXCL12P48061 AL359962.2-201ENST00000610044 303 ntTSL 5 BASIC1.83□□□□□ -2.12
CXCL12P48061 MIR7844-201ENST00000616161 122 ntBASIC1.83□□□□□ -2.12
CXCL12P48061 OR8K3-203ENST00000641662 2438 ntAPPRIS P1 BASIC1.83□□□□□ -2.12
CXCL12P48061 AC010889.1-201ENST00000566193 2666 ntBASIC1.83□□□□□ -2.12
CXCL12P48061 SNX10-209ENST00000619420 2361 ntAPPRIS ALT1 TSL 5 BASIC1.83□□□□□ -2.12
CXCL12P48061 ZGRF1-203ENST00000445203 6529 ntAPPRIS P1 TSL 5 BASIC1.82□□□□□ -2.12
CXCL12P48061 RNU5F-7P-201ENST00000363696 115 ntBASIC1.82□□□□□ -2.12
CXCL12P48061 RNU6-658P-201ENST00000384606 106 ntBASIC1.82□□□□□ -2.12
CXCL12P48061 Y_RNA.560-201ENST00000384689 102 ntBASIC1.82□□□□□ -2.12
CXCL12P48061 SNORD115.1-201ENST00000391109 76 ntBASIC1.82□□□□□ -2.12
CXCL12P48061 RNU6-1328P-201ENST00000410938 106 ntBASIC1.82□□□□□ -2.12
CXCL12P48061 LINC00368-201ENST00000422994 650 ntTSL 1 (best) BASIC1.82□□□□□ -2.12
CXCL12P48061 LINC01037-201ENST00000427337 424 ntTSL 5 BASIC1.82□□□□□ -2.12
CXCL12P48061 AL033539.1-201ENST00000427775 743 ntTSL 3 BASIC1.82□□□□□ -2.12
CXCL12P48061 AC017048.2-201ENST00000431455 822 ntTSL 3 BASIC1.82□□□□□ -2.12
CXCL12P48061 AC098831.1-201ENST00000440661 216 ntBASIC1.82□□□□□ -2.12
CXCL12P48061 AL121957.1-201ENST00000441532 338 ntTSL 2 BASIC1.82□□□□□ -2.12
CXCL12P48061 DPP10-AS2-201ENST00000446992 624 ntTSL 5 BASIC1.82□□□□□ -2.12
CXCL12P48061 LINC01611-203ENST00000454981 504 ntTSL 3 BASIC1.82□□□□□ -2.12
CXCL12P48061 SNORD97-201ENST00000459187 142 ntBASIC1.82□□□□□ -2.12
CXCL12P48061 AC025033.1-201ENST00000463883 194 ntBASIC1.82□□□□□ -2.12
CXCL12P48061 AC010273.2-201ENST00000479830 438 ntTSL 5 BASIC1.82□□□□□ -2.12
CXCL12P48061 MTND1P3-201ENST00000484956 952 ntBASIC1.82□□□□□ -2.12
CXCL12P48061 EIF4EP3-201ENST00000498782 656 ntBASIC1.82□□□□□ -2.12
CXCL12P48061 GZMAP1-201ENST00000503054 631 ntBASIC1.82□□□□□ -2.12
CXCL12P48061 AC005178.1-201ENST00000508392 440 ntBASIC1.82□□□□□ -2.12
CXCL12P48061 RNU6-759P-201ENST00000516740 103 ntBASIC1.82□□□□□ -2.12
CXCL12P48061 RNU1-40P-201ENST00000516816 164 ntBASIC1.82□□□□□ -2.12
CXCL12P48061 RNU1-97P-201ENST00000516872 164 ntBASIC1.82□□□□□ -2.12
CXCL12P48061 RNU6-703P-201ENST00000516946 107 ntBASIC1.82□□□□□ -2.12
CXCL12P48061 AC007375.1-201ENST00000554513 578 ntBASIC1.82□□□□□ -2.12
CXCL12P48061 DNAJC19P9-201ENST00000555084 351 ntBASIC1.82□□□□□ -2.12
CXCL12P48061 PCLAF-207ENST00000559519 749 ntTSL 2 BASIC1.82□□□□□ -2.12
CXCL12P48061 AL513324.1-201ENST00000575236 632 ntTSL 5 BASIC1.82□□□□□ -2.12
CXCL12P48061 AC131274.4-201ENST00000577879 398 ntTSL 3 BASIC1.82□□□□□ -2.12
CXCL12P48061 AC090616.2-202ENST00000584248 222 ntBASIC1.82□□□□□ -2.12
CXCL12P48061 AC073544.2-201ENST00000601155 540 ntBASIC1.82□□□□□ -2.12
CXCL12P48061 WISP1-OT1-201ENST00000602893 642 ntBASIC1.82□□□□□ -2.12
CXCL12P48061 CERS6-AS1-209ENST00000609766 642 ntTSL 5 BASIC1.82□□□□□ -2.12
CXCL12P48061 C8orf59-209ENST00000612977 586 ntAPPRIS P1 TSL 2 BASIC1.82□□□□□ -2.12
CXCL12P48061 AC025594.3-201ENST00000613068 790 ntBASIC1.82□□□□□ -2.12
CXCL12P48061 HMGB1P24-202ENST00000615653 685 ntBASIC1.82□□□□□ -2.12
CXCL12P48061 LINC01592-202ENST00000518540 2367 ntTSL 2 BASIC1.82□□□□□ -2.12
CXCL12P48061 VIM-AS1-201ENST00000437232 1351 ntTSL 2 BASIC1.82□□□□□ -2.12
CXCL12P48061 ECT2-211ENST00000441497 2825 ntAPPRIS P2 TSL 1 (best) BASIC1.81□□□□□ -2.12
CXCL12P48061 RNU6-188P-201ENST00000364207 107 ntBASIC1.81□□□□□ -2.12
CXCL12P48061 RNU5E-6P-201ENST00000365574 115 ntBASIC1.81□□□□□ -2.12
CXCL12P48061 Y_RNA.608-201ENST00000410647 95 ntBASIC1.81□□□□□ -2.12
CXCL12P48061 RNU6-920P-201ENST00000410926 92 ntBASIC1.81□□□□□ -2.12
CXCL12P48061 MAGI2-AS2-201ENST00000411616 476 ntTSL 2 BASIC1.81□□□□□ -2.12
CXCL12P48061 RPS12P24-201ENST00000412619 387 ntBASIC1.81□□□□□ -2.12
CXCL12P48061 AC092660.1-201ENST00000420648 371 ntTSL 2 BASIC1.81□□□□□ -2.12
CXCL12P48061 AC016710.1-201ENST00000421326 466 ntTSL 3 BASIC1.81□□□□□ -2.12
CXCL12P48061 HMGB1P9-201ENST00000429856 646 ntBASIC1.81□□□□□ -2.12
CXCL12P48061 AC011998.3-201ENST00000457053 254 ntTSL 3 BASIC1.81□□□□□ -2.12
CXCL12P48061 RPL39P36-201ENST00000490784 156 ntBASIC1.81□□□□□ -2.12
CXCL12P48061 RPS29P11-201ENST00000496507 171 ntBASIC1.81□□□□□ -2.12
CXCL12P48061 AP002075.1-201ENST00000505091 603 ntTSL 3 BASIC1.81□□□□□ -2.12
CXCL12P48061 MRPS36P5-201ENST00000551909 298 ntBASIC1.81□□□□□ -2.12
CXCL12P48061 NACAP3-201ENST00000552100 481 ntBASIC1.81□□□□□ -2.12
CXCL12P48061 AC021739.1-201ENST00000559631 174 ntBASIC1.81□□□□□ -2.12
CXCL12P48061 AC015813.2-201ENST00000578794 711 ntAPPRIS P1 TSL 3 BASIC1.81□□□□□ -2.12
CXCL12P48061 AC036222.2-201ENST00000579033 333 ntTSL 3 BASIC1.81□□□□□ -2.12
CXCL12P48061 AC024619.4-201ENST00000580924 316 ntBASIC1.81□□□□□ -2.12
CXCL12P48061 MIR4303-201ENST00000581299 66 ntBASIC1.81□□□□□ -2.12
CXCL12P48061 MIR3616-201ENST00000584070 92 ntBASIC1.81□□□□□ -2.12
CXCL12P48061 TCF4-AS2-201ENST00000586467 445 ntTSL 2 BASIC1.81□□□□□ -2.12
CXCL12P48061 AL512598.1-201ENST00000610158 273 ntBASIC1.81□□□□□ -2.12
CXCL12P48061 AL589743.7-201ENST00000612637 233 ntBASIC1.81□□□□□ -2.12
CXCL12P48061 MALAT1-206ENST00000612781 234 ntTSL 3 BASIC1.81□□□□□ -2.12
CXCL12P48061 AC092140.2-201ENST00000618027 521 ntBASIC1.81□□□□□ -2.12
CXCL12P48061 MIR3199-2-201ENST00000636243 86 ntBASIC1.81□□□□□ -2.12
CXCL12P48061 Z99571.1-201ENST00000636677 394 ntBASIC1.81□□□□□ -2.12
CXCL12P48061 Clostridiales-1.3-201ENST00000637703 147 ntBASIC1.81□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 121.2 ms