Protein–RNA interactions for Protein: P46779

RPL28, 60S ribosomal protein L28, humanhuman

Known RBP Predictions only

Length 137 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPL28P46779 RNU2-1-201ENST00000618664 191 ntBASIC1.1□□□□□ -2.23
RPL28P46779 U2.6-201ENST00000619225 191 ntBASIC1.1□□□□□ -2.23
RPL28P46779 U2.5-201ENST00000619465 191 ntBASIC1.1□□□□□ -2.23
RPL28P46779 U2.10-201ENST00000620268 191 ntBASIC1.1□□□□□ -2.23
RPL28P46779 AP003476.1-201ENST00000623984 516 ntBASIC1.1□□□□□ -2.23
RPL28P46779 AC068631.1-221ENST00000626006 592 ntTSL 5 BASIC1.1□□□□□ -2.23
RPL28P46779 AL512643.1-201ENST00000635735 524 ntBASIC1.1□□□□□ -2.23
RPL28P46779 MTND5P42-201ENST00000637720 498 ntBASIC1.1□□□□□ -2.23
RPL28P46779 AP000648.3-201ENST00000623539 4507 ntBASIC1.1□□□□□ -2.23
RPL28P46779 ZNF736P3Y-201ENST00000428264 1465 ntBASIC1.1□□□□□ -2.23
RPL28P46779 AC111000.4-202ENST00000505646 2648 ntTSL 2 BASIC1.1□□□□□ -2.23
RPL28P46779 NF1-214ENST00000490416 1329 ntTSL 3 BASIC1.1□□□□□ -2.23
RPL28P46779 MRPL42-202ENST00000393128 1983 ntAPPRIS ALT1 TSL 3 BASIC1.09□□□□□ -2.23
RPL28P46779 CD80-202ENST00000383669 771 ntTSL 1 (best) BASIC1.09□□□□□ -2.23
RPL28P46779 MIR186-201ENST00000384988 86 ntBASIC1.09□□□□□ -2.23
RPL28P46779 AC068050.1-201ENST00000394891 380 ntBASIC1.09□□□□□ -2.23
RPL28P46779 ERHP2-201ENST00000402323 299 ntBASIC1.09□□□□□ -2.23
RPL28P46779 MIR1305-201ENST00000408300 86 ntBASIC1.09□□□□□ -2.23
RPL28P46779 RN7SKP284-201ENST00000411002 343 ntBASIC1.09□□□□□ -2.23
RPL28P46779 RAC1P6-201ENST00000423911 575 ntBASIC1.09□□□□□ -2.23
RPL28P46779 TXNL1P1-201ENST00000429528 554 ntBASIC1.09□□□□□ -2.23
RPL28P46779 LINC00392-201ENST00000430033 557 ntTSL 3 BASIC1.09□□□□□ -2.23
RPL28P46779 AL138900.1-201ENST00000449345 399 ntTSL 3 BASIC1.09□□□□□ -2.23
RPL28P46779 AC003071.1-201ENST00000451219 789 ntBASIC1.09□□□□□ -2.23
RPL28P46779 LINC01069-201ENST00000452933 546 ntTSL 5 BASIC1.09□□□□□ -2.23
RPL28P46779 PRELID3BP1-201ENST00000457142 540 ntBASIC1.09□□□□□ -2.23
RPL28P46779 RNU1-98P-201ENST00000458992 160 ntBASIC1.09□□□□□ -2.23
RPL28P46779 RNU6-953P-201ENST00000459154 107 ntBASIC1.09□□□□□ -2.23
RPL28P46779 MED28P2-201ENST00000475771 317 ntBASIC1.09□□□□□ -2.23
RPL28P46779 AC108727.1-201ENST00000513802 393 ntTSL 2 BASIC1.09□□□□□ -2.23
RPL28P46779 RNU6-1315P-201ENST00000517187 99 ntBASIC1.09□□□□□ -2.23
RPL28P46779 EMP1-206ENST00000537612 505 ntTSL 3 BASIC1.09□□□□□ -2.23
RPL28P46779 AC092451.2-201ENST00000538746 658 ntBASIC1.09□□□□□ -2.23
RPL28P46779 AC018410.2-201ENST00000540410 610 ntTSL 5 BASIC1.09□□□□□ -2.23
RPL28P46779 AC023906.2-201ENST00000558343 462 ntTSL 3 BASIC1.09□□□□□ -2.23
RPL28P46779 AC110588.1-201ENST00000559699 137 ntBASIC1.09□□□□□ -2.23
RPL28P46779 ZNF667-AS1-209ENST00000601875 495 ntTSL 3 BASIC1.09□□□□□ -2.23
RPL28P46779 MIR502-201ENST00000606349 86 ntBASIC1.09□□□□□ -2.23
RPL28P46779 AC093788.1-201ENST00000609356 927 ntBASIC1.09□□□□□ -2.23
RPL28P46779 AC005696.2-201ENST00000610120 626 ntTSL 3 BASIC1.09□□□□□ -2.23
RPL28P46779 AL355472.4-201ENST00000610233 626 ntBASIC1.09□□□□□ -2.23
RPL28P46779 AC068944.2-201ENST00000610373 403 ntBASIC1.09□□□□□ -2.23
RPL28P46779 uc_338.5-201ENST00000611839 155 ntBASIC1.09□□□□□ -2.23
RPL28P46779 AC006386.1-201ENST00000619436 415 ntBASIC1.09□□□□□ -2.23
RPL28P46779 U1.36-201ENST00000620684 176 ntBASIC1.09□□□□□ -2.23
RPL28P46779 AC091965.5-201ENST00000624785 342 ntBASIC1.09□□□□□ -2.23
RPL28P46779 FANCD2-213ENST00000625535 117 ntTSL 5 BASIC1.09□□□□□ -2.23
RPL28P46779 AC068631.1-220ENST00000630726 256 ntTSL 5 BASIC1.09□□□□□ -2.23
RPL28P46779 AC134980.1-208ENST00000640228 535 ntTSL 5 BASIC1.09□□□□□ -2.23
RPL28P46779 GS1-279B7.1-204ENST00000641809 378 ntBASIC1.09□□□□□ -2.23
RPL28P46779 RBBP8P1-201ENST00000449447 1844 ntBASIC1.09□□□□□ -2.23
RPL28P46779 ABCA5-201ENST00000392676 8220 ntAPPRIS P1 TSL 1 (best) BASIC1.08□□□□□ -2.24
RPL28P46779 MIR126-201ENST00000362291 85 ntBASIC1.08□□□□□ -2.24
RPL28P46779 AL390198.1-201ENST00000376445 320 ntTSL 2 BASIC1.08□□□□□ -2.24
RPL28P46779 SNORD14D-201ENST00000384390 87 ntBASIC1.08□□□□□ -2.24
RPL28P46779 RNU6-1274P-201ENST00000384557 107 ntBASIC1.08□□□□□ -2.24
RPL28P46779 SNORA40.18-201ENST00000391200 128 ntBASIC1.08□□□□□ -2.24
RPL28P46779 MDM2-208ENST00000393410 732 ntTSL 1 (best) BASIC1.08□□□□□ -2.24
RPL28P46779 MDM2-210ENST00000393413 657 ntTSL 1 (best) BASIC1.08□□□□□ -2.24
RPL28P46779 AC119751.3-201ENST00000399720 670 ntBASIC1.08□□□□□ -2.24
RPL28P46779 AF130351.1-202ENST00000400562 808 ntAPPRIS P5 TSL 3 BASIC1.08□□□□□ -2.24
RPL28P46779 FCF1P10-201ENST00000407590 479 ntBASIC1.08□□□□□ -2.24
RPL28P46779 RNA5SP501-201ENST00000410990 112 ntBASIC1.08□□□□□ -2.24
RPL28P46779 RNU2-32P-201ENST00000411193 191 ntBASIC1.08□□□□□ -2.24
RPL28P46779 AC069282.1-201ENST00000411911 526 ntBASIC1.08□□□□□ -2.24
RPL28P46779 LINC00301-202ENST00000412599 772 ntTSL 1 (best) BASIC1.08□□□□□ -2.24
RPL28P46779 TEX41-202ENST00000414256 604 ntTSL 5 BASIC1.08□□□□□ -2.24
RPL28P46779 AC241644.2-201ENST00000426504 480 ntTSL 3 BASIC1.08□□□□□ -2.24
RPL28P46779 AL359878.2-201ENST00000435531 407 ntTSL 3 BASIC1.08□□□□□ -2.24
RPL28P46779 LARP1BP3-201ENST00000437229 869 ntBASIC1.08□□□□□ -2.24
RPL28P46779 AL117351.1-201ENST00000438864 766 ntBASIC1.08□□□□□ -2.24
RPL28P46779 AC245102.2-201ENST00000448956 180 ntBASIC1.08□□□□□ -2.24
RPL28P46779 AL034345.2-203ENST00000453417 383 ntTSL 3 BASIC1.08□□□□□ -2.24
RPL28P46779 CPHL1P-203ENST00000471823 523 ntTSL 5 BASIC1.08□□□□□ -2.24
RPL28P46779 MTND1P3-201ENST00000484956 952 ntBASIC1.08□□□□□ -2.24
RPL28P46779 AC109927.2-201ENST00000506416 303 ntBASIC1.08□□□□□ -2.24
RPL28P46779 CTD-2350J17.1-202ENST00000510456 360 ntTSL 2 BASIC1.08□□□□□ -2.24
RPL28P46779 AP003392.2-201ENST00000527269 208 ntBASIC1.08□□□□□ -2.24
RPL28P46779 AP000907.2-201ENST00000530827 353 ntBASIC1.08□□□□□ -2.24
RPL28P46779 AL355076.2-202ENST00000553754 574 ntTSL 4 BASIC1.08□□□□□ -2.24
RPL28P46779 AC084756.1-201ENST00000558237 606 ntTSL 5 BASIC1.08□□□□□ -2.24
RPL28P46779 AL354943.1-201ENST00000572103 781 ntBASIC1.08□□□□□ -2.24
RPL28P46779 AC011933.3-201ENST00000578226 372 ntTSL 1 (best) BASIC1.08□□□□□ -2.24
RPL28P46779 AC016925.2-201ENST00000605108 242 ntBASIC1.08□□□□□ -2.24
RPL28P46779 AL512625.3-207ENST00000609749 477 ntTSL 3 BASIC1.08□□□□□ -2.24
RPL28P46779 uc_338.15-201ENST00000615470 191 ntBASIC1.08□□□□□ -2.24
RPL28P46779 CYLC1-202ENST00000621735 379 ntAPPRIS ALT2 TSL 3 BASIC1.08□□□□□ -2.24
RPL28P46779 AC084768.2-201ENST00000622736 221 ntBASIC1.08□□□□□ -2.24
RPL28P46779 AC013470.2-206ENST00000636804 771 ntAPPRIS P5 TSL 5 BASIC1.08□□□□□ -2.24
RPL28P46779 FARSBP1-201ENST00000435808 1778 ntBASIC1.08□□□□□ -2.24
RPL28P46779 CFHR4-204ENST00000608469 1601 ntTSL 1 (best) BASIC1.07□□□□□ -2.24
RPL28P46779 HAUS6P2-201ENST00000433254 2404 ntBASIC1.07□□□□□ -2.24
RPL28P46779 Y_RNA.192-201ENST00000363977 102 ntBASIC1.07□□□□□ -2.24
RPL28P46779 RNU6-1164P-201ENST00000364428 107 ntBASIC1.07□□□□□ -2.24
RPL28P46779 RNU6-487P-201ENST00000365430 104 ntBASIC1.07□□□□□ -2.24
RPL28P46779 SNORA4.3-201ENST00000365564 137 ntBASIC1.07□□□□□ -2.24
RPL28P46779 KIF27-203ENST00000376347 1030 ntTSL 5 BASIC1.07□□□□□ -2.24
RPL28P46779 RNU6-338P-201ENST00000383888 105 ntBASIC1.07□□□□□ -2.24
RPL28P46779 RNU6-843P-201ENST00000384454 104 ntBASIC1.07□□□□□ -2.24
RPL28P46779 SNORD116-12-201ENST00000384468 92 ntBASIC1.07□□□□□ -2.24
Retrieved 100 of 98,524 protein–RNA pairs in 102.6 ms