Protein–RNA interactions for Protein: P43307

SSR1, Translocon-associated protein subunit alpha, humanhuman

Known RBP Predictions only

Length 286 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1P43307 EDNRB-AS1-201ENST00000422405 601 ntTSL 5 BASIC2.08□□□□□ -2.08
SSR1P43307 U51244.1-201ENST00000423120 374 ntTSL 3 BASIC2.08□□□□□ -2.08
SSR1P43307 AL731563.2-201ENST00000431293 291 ntTSL 5 BASIC2.08□□□□□ -2.08
SSR1P43307 RPL37P21-201ENST00000435890 276 ntBASIC2.08□□□□□ -2.08
SSR1P43307 IFNA20P-201ENST00000436840 528 ntBASIC2.08□□□□□ -2.08
SSR1P43307 LINC01564-201ENST00000448327 566 ntTSL 3 BASIC2.08□□□□□ -2.08
SSR1P43307 AC004917.1-201ENST00000490856 575 ntTSL 4 BASIC2.08□□□□□ -2.08
SSR1P43307 ANXA2P1-201ENST00000505539 926 ntBASIC2.08□□□□□ -2.08
SSR1P43307 AC119751.5-201ENST00000514077 770 ntBASIC2.08□□□□□ -2.08
SSR1P43307 PCAT4-202ENST00000514836 373 ntTSL 3 BASIC2.08□□□□□ -2.08
SSR1P43307 RNA5SP112-201ENST00000515937 99 ntBASIC2.08□□□□□ -2.08
SSR1P43307 RNU6-1003P-201ENST00000517099 105 ntBASIC2.08□□□□□ -2.08
SSR1P43307 OR5B19P-201ENST00000531766 928 ntBASIC2.08□□□□□ -2.08
SSR1P43307 AC090503.1-201ENST00000548029 729 ntTSL 3 BASIC2.08□□□□□ -2.08
SSR1P43307 AL512310.1-201ENST00000548639 172 ntBASIC2.08□□□□□ -2.08
SSR1P43307 AC090888.2-201ENST00000559765 1144 ntBASIC2.08□□□□□ -2.08
SSR1P43307 AC020891.3-201ENST00000560011 363 ntTSL 3 BASIC2.08□□□□□ -2.08
SSR1P43307 AC012378.1-201ENST00000561155 364 ntTSL 3 BASIC2.08□□□□□ -2.08
SSR1P43307 LINC01570-201ENST00000561572 434 ntTSL 3 BASIC2.08□□□□□ -2.08
SSR1P43307 AL354943.1-201ENST00000572103 781 ntBASIC2.08□□□□□ -2.08
SSR1P43307 AC069061.2-202ENST00000580280 357 ntTSL 3 BASIC2.08□□□□□ -2.08
SSR1P43307 AP005671.1-201ENST00000581798 463 ntTSL 3 BASIC2.08□□□□□ -2.08
SSR1P43307 DEFB131E-202ENST00000602581 683 ntBASIC2.08□□□□□ -2.08
SSR1P43307 AP000811.1-201ENST00000603803 651 ntBASIC2.08□□□□□ -2.08
SSR1P43307 AC011458.1-201ENST00000604034 617 ntBASIC2.08□□□□□ -2.08
SSR1P43307 AC027449.1-201ENST00000608890 407 ntBASIC2.08□□□□□ -2.08
SSR1P43307 uc_338.14-201ENST00000613162 166 ntBASIC2.08□□□□□ -2.08
SSR1P43307 AC104010.1-201ENST00000616889 150 ntBASIC2.08□□□□□ -2.08
SSR1P43307 AL590808.1-201ENST00000618696 141 ntBASIC2.08□□□□□ -2.08
SSR1P43307 AL445523.1-201ENST00000451184 1362 ntBASIC2.08□□□□□ -2.08
SSR1P43307 DLEU2_6.3-201ENST00000340052 136 ntBASIC2.07□□□□□ -2.08
SSR1P43307 RNU6-817P-201ENST00000391083 104 ntBASIC2.07□□□□□ -2.08
SSR1P43307 RNU6ATAC38P-201ENST00000408119 126 ntBASIC2.07□□□□□ -2.08
SSR1P43307 RNU6-584P-201ENST00000410350 95 ntBASIC2.07□□□□□ -2.08
SSR1P43307 RNU2-20P-201ENST00000410425 191 ntBASIC2.07□□□□□ -2.08
SSR1P43307 AL353777.1-201ENST00000425552 326 ntBASIC2.07□□□□□ -2.08
SSR1P43307 AL139415.2-201ENST00000431968 163 ntBASIC2.07□□□□□ -2.08
SSR1P43307 HMGB3P12-201ENST00000438745 556 ntBASIC2.07□□□□□ -2.08
SSR1P43307 FABP5P13-201ENST00000452144 328 ntBASIC2.07□□□□□ -2.08
SSR1P43307 BTF3P15-201ENST00000455606 336 ntBASIC2.07□□□□□ -2.08
SSR1P43307 AL583843.1-201ENST00000456070 346 ntBASIC2.07□□□□□ -2.08
SSR1P43307 AL356270.1-201ENST00000456587 522 ntTSL 3 BASIC2.07□□□□□ -2.08
SSR1P43307 AC087884.1-201ENST00000469738 328 ntBASIC2.07□□□□□ -2.08
SSR1P43307 AC022272.1-201ENST00000503478 777 ntTSL 2 BASIC2.07□□□□□ -2.08
SSR1P43307 AC034244.1-201ENST00000507687 207 ntBASIC2.07□□□□□ -2.08
SSR1P43307 RNU6-1092P-201ENST00000516955 87 ntBASIC2.07□□□□□ -2.08
SSR1P43307 SKP1-203ENST00000517625 876 ntAPPRIS P4 TSL 3 BASIC2.07□□□□□ -2.08
SSR1P43307 FAM92A1P1-201ENST00000528023 890 ntBASIC2.07□□□□□ -2.08
SSR1P43307 LINC02384-208ENST00000546086 565 ntTSL 3 BASIC2.07□□□□□ -2.08
SSR1P43307 POC1B-211ENST00000549504 581 ntTSL 5 BASIC2.07□□□□□ -2.08
SSR1P43307 AC008083.3-202ENST00000552063 277 ntTSL 3 BASIC2.07□□□□□ -2.08
SSR1P43307 AC012435.1-202ENST00000568772 240 ntBASIC2.07□□□□□ -2.08
SSR1P43307 MTCYBP33-201ENST00000575007 1130 ntBASIC2.07□□□□□ -2.08
SSR1P43307 MIR5089-201ENST00000580047 84 ntBASIC2.07□□□□□ -2.08
SSR1P43307 AL158032.1-201ENST00000605401 106 ntBASIC2.07□□□□□ -2.08
SSR1P43307 AC126118.1-201ENST00000607744 628 ntBASIC2.07□□□□□ -2.08
SSR1P43307 AL365204.3-201ENST00000612448 685 ntBASIC2.07□□□□□ -2.08
SSR1P43307 DLEU2_6.2-201ENST00000620994 136 ntBASIC2.07□□□□□ -2.08
SSR1P43307 MIR219B-201ENST00000637023 88 ntBASIC2.07□□□□□ -2.08
SSR1P43307 KTN1-203ENST00000395309 4021 ntAPPRIS ALT2 TSL 5 BASIC2.06□□□□□ -2.08
SSR1P43307 RNU6-858P-201ENST00000362436 107 ntBASIC2.06□□□□□ -2.08
SSR1P43307 RNU5F-6P-201ENST00000362979 116 ntBASIC2.06□□□□□ -2.08
SSR1P43307 RNU6-533P-201ENST00000384144 107 ntBASIC2.06□□□□□ -2.08
SSR1P43307 SNORA40C-201ENST00000391285 128 ntBASIC2.06□□□□□ -2.08
SSR1P43307 SNORA3.2-201ENST00000408221 125 ntBASIC2.06□□□□□ -2.08
SSR1P43307 RNU6ATAC37P-201ENST00000408328 131 ntBASIC2.06□□□□□ -2.08
SSR1P43307 RN7SKP223-201ENST00000410582 62 ntBASIC2.06□□□□□ -2.08
SSR1P43307 MYCBP2-AS2-201ENST00000428716 428 ntTSL 5 BASIC2.06□□□□□ -2.08
SSR1P43307 AL606662.1-201ENST00000445763 553 ntBASIC2.06□□□□□ -2.08
SSR1P43307 AL353148.1-201ENST00000449761 463 ntTSL 2 BASIC2.06□□□□□ -2.08
SSR1P43307 AL133481.3-201ENST00000456546 333 ntTSL 3 BASIC2.06□□□□□ -2.08
SSR1P43307 AC109927.2-201ENST00000506416 303 ntBASIC2.06□□□□□ -2.08
SSR1P43307 SMAD1-AS2-201ENST00000508936 1090 ntTSL 1 (best) BASIC2.06□□□□□ -2.08
SSR1P43307 SNORA4.4-201ENST00000515921 135 ntBASIC2.06□□□□□ -2.08
SSR1P43307 RNU6-1315P-201ENST00000517187 99 ntBASIC2.06□□□□□ -2.08
SSR1P43307 MRPS36P3-201ENST00000519284 130 ntBASIC2.06□□□□□ -2.08
SSR1P43307 AP000756.1-201ENST00000532606 679 ntTSL 2 BASIC2.06□□□□□ -2.08
SSR1P43307 LINC02464-201ENST00000552060 368 ntTSL 2 BASIC2.06□□□□□ -2.08
SSR1P43307 AC007948.1-201ENST00000581632 242 ntTSL 5 BASIC2.06□□□□□ -2.08
SSR1P43307 AL670379.6-201ENST00000603753 252 ntBASIC2.06□□□□□ -2.08
SSR1P43307 AL670379.11-201ENST00000604059 253 ntBASIC2.06□□□□□ -2.08
SSR1P43307 AC008162.1-201ENST00000604718 254 ntBASIC2.06□□□□□ -2.08
SSR1P43307 AL670379.1-201ENST00000604752 252 ntBASIC2.06□□□□□ -2.08
SSR1P43307 AL670379.5-201ENST00000605253 252 ntBASIC2.06□□□□□ -2.08
SSR1P43307 AL670379.12-201ENST00000605291 253 ntBASIC2.06□□□□□ -2.08
SSR1P43307 AL670379.8-201ENST00000605353 252 ntBASIC2.06□□□□□ -2.08
SSR1P43307 NDUFA8P1-201ENST00000605525 367 ntBASIC2.06□□□□□ -2.08
SSR1P43307 AL670379.7-201ENST00000605823 252 ntBASIC2.06□□□□□ -2.08
SSR1P43307 ATM-228ENST00000639240 498 ntTSL 5 BASIC2.06□□□□□ -2.08
SSR1P43307 ATM-230ENST00000640388 578 ntTSL 5 BASIC2.06□□□□□ -2.08
SSR1P43307 SI-201ENST00000264382 6011 ntAPPRIS P1 TSL 1 (best) BASIC2.06□□□□□ -2.08
SSR1P43307 KIAA1107-201ENST00000370378 4622 ntTSL 5 BASIC2.05□□□□□ -2.08
SSR1P43307 OR8K3-204ENST00000641689 2380 ntAPPRIS P1 BASIC2.05□□□□□ -2.08
SSR1P43307 TBC1D15-210ENST00000485960 2489 ntAPPRIS P1 TSL 1 (best) BASIC2.05□□□□□ -2.08
SSR1P43307 RNU6-190P-201ENST00000384154 102 ntBASIC2.05□□□□□ -2.08
SSR1P43307 RNU6-39P-201ENST00000384344 107 ntBASIC2.05□□□□□ -2.08
SSR1P43307 Y_RNA.500-201ENST00000384466 111 ntBASIC2.05□□□□□ -2.08
SSR1P43307 RPL17P50-201ENST00000396131 546 ntBASIC2.05□□□□□ -2.08
SSR1P43307 AC114491.1-201ENST00000416095 246 ntBASIC2.05□□□□□ -2.08
SSR1P43307 AL162254.1-202ENST00000419604 497 ntTSL 5 BASIC2.05□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 104.2 ms