Protein–RNA interactions for Protein: P43005

SLC1A1, Excitatory amino acid transporter 3, humanhuman

Predictions only

Length 524 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC1A1P43005 AL031667.3-201ENST00000620124 655 ntBASIC1.88□□□□□ -2.11
SLC1A1P43005 SMARCAD1-201ENST00000354268 4912 ntAPPRIS P3 TSL 1 (best) BASIC1.87□□□□□ -2.11
SLC1A1P43005 RNU6-660P-201ENST00000364566 109 ntBASIC1.87□□□□□ -2.11
SLC1A1P43005 RNA5SP126-201ENST00000365092 109 ntBASIC1.87□□□□□ -2.11
SLC1A1P43005 RNU6-190P-201ENST00000384154 102 ntBASIC1.87□□□□□ -2.11
SLC1A1P43005 RNU6-1200P-201ENST00000384162 107 ntBASIC1.87□□□□□ -2.11
SLC1A1P43005 MIR676-201ENST00000390702 67 ntBASIC1.87□□□□□ -2.11
SLC1A1P43005 AL079342.1-201ENST00000401460 267 ntBASIC1.87□□□□□ -2.11
SLC1A1P43005 AC064871.1-202ENST00000413954 382 ntTSL 5 BASIC1.87□□□□□ -2.11
SLC1A1P43005 AC104777.3-201ENST00000416350 545 ntTSL 3 BASIC1.87□□□□□ -2.11
SLC1A1P43005 AC104653.1-201ENST00000420579 578 ntTSL 2 BASIC1.87□□□□□ -2.11
SLC1A1P43005 AL445685.2-201ENST00000422551 342 ntBASIC1.87□□□□□ -2.11
SLC1A1P43005 RPL31P63-201ENST00000422565 375 ntBASIC1.87□□□□□ -2.11
SLC1A1P43005 AL160275.3-201ENST00000423876 471 ntBASIC1.87□□□□□ -2.11
SLC1A1P43005 AC241644.2-201ENST00000426504 480 ntTSL 3 BASIC1.87□□□□□ -2.11
SLC1A1P43005 AL139397.1-201ENST00000430456 644 ntTSL 2 BASIC1.87□□□□□ -2.11
SLC1A1P43005 AL161788.1-201ENST00000441805 169 ntBASIC1.87□□□□□ -2.11
SLC1A1P43005 AL359771.1-201ENST00000441809 379 ntTSL 5 BASIC1.87□□□□□ -2.11
SLC1A1P43005 AL390783.1-203ENST00000457058 248 ntTSL 3 BASIC1.87□□□□□ -2.11
SLC1A1P43005 AC117386.2-202ENST00000472821 522 ntTSL 3 BASIC1.87□□□□□ -2.11
SLC1A1P43005 RPL21P99-201ENST00000480369 423 ntBASIC1.87□□□□□ -2.11
SLC1A1P43005 AC109927.2-201ENST00000506416 303 ntBASIC1.87□□□□□ -2.11
SLC1A1P43005 AC008869.1-201ENST00000510938 442 ntTSL 2 BASIC1.87□□□□□ -2.11
SLC1A1P43005 AC087276.4-201ENST00000530042 444 ntTSL 3 BASIC1.87□□□□□ -2.11
SLC1A1P43005 AP000756.1-201ENST00000532606 679 ntTSL 2 BASIC1.87□□□□□ -2.11
SLC1A1P43005 AC018410.2-201ENST00000540410 610 ntTSL 5 BASIC1.87□□□□□ -2.11
SLC1A1P43005 AKAP7-209ENST00000541650 2008 ntTSL 5 BASIC1.87□□□□□ -2.11
SLC1A1P43005 POC1B-211ENST00000549504 581 ntTSL 5 BASIC1.87□□□□□ -2.11
SLC1A1P43005 TMF1P1-201ENST00000576058 373 ntBASIC1.87□□□□□ -2.11
SLC1A1P43005 AC121334.2-201ENST00000605387 271 ntBASIC1.87□□□□□ -2.11
SLC1A1P43005 AC245297.3-203ENST00000612135 405 ntTSL 5 BASIC1.87□□□□□ -2.11
SLC1A1P43005 AC110994.2-201ENST00000635481 492 ntBASIC1.87□□□□□ -2.11
SLC1A1P43005 ATM-228ENST00000639240 498 ntTSL 5 BASIC1.87□□□□□ -2.11
SLC1A1P43005 ATM-230ENST00000640388 578 ntTSL 5 BASIC1.87□□□□□ -2.11
SLC1A1P43005 CEP57L1-216ENST00000521522 2259 ntTSL 5 BASIC1.87□□□□□ -2.11
SLC1A1P43005 CGGBP1-202ENST00000398392 5298 ntAPPRIS P1 BASIC1.87□□□□□ -2.11
SLC1A1P43005 AC138393.1-203ENST00000327086 343 ntBASIC1.86□□□□□ -2.11
SLC1A1P43005 Y_RNA.33-201ENST00000362591 102 ntBASIC1.86□□□□□ -2.11
SLC1A1P43005 SNORD48-201ENST00000364953 64 ntBASIC1.86□□□□□ -2.11
SLC1A1P43005 RNU6-946P-201ENST00000383878 107 ntBASIC1.86□□□□□ -2.11
SLC1A1P43005 RNU6-809P-201ENST00000384461 107 ntBASIC1.86□□□□□ -2.11
SLC1A1P43005 FTH1P15-201ENST00000406984 280 ntBASIC1.86□□□□□ -2.11
SLC1A1P43005 MIR1294-201ENST00000408503 142 ntBASIC1.86□□□□□ -2.11
SLC1A1P43005 U51244.1-201ENST00000423120 374 ntTSL 3 BASIC1.86□□□□□ -2.11
SLC1A1P43005 AL390774.2-201ENST00000423942 788 ntTSL 3 BASIC1.86□□□□□ -2.11
SLC1A1P43005 LINC01817-201ENST00000429317 564 ntTSL 4 BASIC1.86□□□□□ -2.11
SLC1A1P43005 LINC01758-201ENST00000448001 458 ntTSL 3 BASIC1.86□□□□□ -2.11
SLC1A1P43005 AC117503.1-201ENST00000472241 394 ntBASIC1.86□□□□□ -2.11
SLC1A1P43005 AC093752.1-212ENST00000500559 453 ntTSL 1 (best) BASIC1.86□□□□□ -2.11
SLC1A1P43005 AC110767.1-201ENST00000508374 239 ntTSL 3 BASIC1.86□□□□□ -2.11
SLC1A1P43005 RNU5B-3P-201ENST00000516601 115 ntBASIC1.86□□□□□ -2.11
SLC1A1P43005 SNORA31.23-201ENST00000517219 133 ntBASIC1.86□□□□□ -2.11
SLC1A1P43005 RNU2-19P-201ENST00000517288 84 ntBASIC1.86□□□□□ -2.11
SLC1A1P43005 AC022616.6-201ENST00000520479 119 ntBASIC1.86□□□□□ -2.11
SLC1A1P43005 AC021785.1-201ENST00000520780 453 ntTSL 3 BASIC1.86□□□□□ -2.11
SLC1A1P43005 MTND2P7-201ENST00000521337 640 ntBASIC1.86□□□□□ -2.11
SLC1A1P43005 MIR1273C-201ENST00000578669 77 ntBASIC1.86□□□□□ -2.11
SLC1A1P43005 AC023394.2-201ENST00000581987 792 ntTSL 5 BASIC1.86□□□□□ -2.11
SLC1A1P43005 AC005357.2-201ENST00000586473 583 ntTSL 2 BASIC1.86□□□□□ -2.11
SLC1A1P43005 AC007229.1-201ENST00000590455 412 ntBASIC1.86□□□□□ -2.11
SLC1A1P43005 AL713866.2-201ENST00000603579 219 ntBASIC1.86□□□□□ -2.11
SLC1A1P43005 AC079610.3-201ENST00000606960 147 ntTSL 3 BASIC1.86□□□□□ -2.11
SLC1A1P43005 AC144521.1-201ENST00000607148 956 ntBASIC1.86□□□□□ -2.11
SLC1A1P43005 MIR15A-201ENST00000607334 83 ntBASIC1.86□□□□□ -2.11
SLC1A1P43005 RNU6-91P-201ENST00000607774 107 ntBASIC1.86□□□□□ -2.11
SLC1A1P43005 AC013412.1-201ENST00000610687 192 ntBASIC1.86□□□□□ -2.11
SLC1A1P43005 AC087241.4-201ENST00000612441 480 ntBASIC1.86□□□□□ -2.11
SLC1A1P43005 AC022202.1-201ENST00000613515 211 ntBASIC1.86□□□□□ -2.11
SLC1A1P43005 CAPZA2-214ENST00000628758 525 ntTSL 5 BASIC1.86□□□□□ -2.11
SLC1A1P43005 SYT14-201ENST00000367015 5094 ntAPPRIS ALT2 TSL 1 (best) BASIC1.86□□□□□ -2.11
SLC1A1P43005 PLCZ1-209ENST00000539875 1398 ntTSL 1 (best) BASIC1.85□□□□□ -2.11
SLC1A1P43005 RNU6-234P-201ENST00000365229 104 ntBASIC1.85□□□□□ -2.11
SLC1A1P43005 SNORA70B-201ENST00000384210 135 ntBASIC1.85□□□□□ -2.11
SLC1A1P43005 AC005062.1-207ENST00000418442 587 ntTSL 3 BASIC1.85□□□□□ -2.11
SLC1A1P43005 AL358234.1-201ENST00000421132 273 ntTSL 5 BASIC1.85□□□□□ -2.11
SLC1A1P43005 AC006366.1-201ENST00000422002 759 ntBASIC1.85□□□□□ -2.11
SLC1A1P43005 EDNRB-AS1-201ENST00000422405 601 ntTSL 5 BASIC1.85□□□□□ -2.11
SLC1A1P43005 AIMP1P2-201ENST00000425294 312 ntBASIC1.85□□□□□ -2.11
SLC1A1P43005 AC093423.2-201ENST00000429074 437 ntTSL 3 BASIC1.85□□□□□ -2.11
SLC1A1P43005 HSFY7P-201ENST00000432672 318 ntBASIC1.85□□□□□ -2.11
SLC1A1P43005 AL359878.2-201ENST00000435531 407 ntTSL 3 BASIC1.85□□□□□ -2.11
SLC1A1P43005 RPL37P21-201ENST00000435890 276 ntBASIC1.85□□□□□ -2.11
SLC1A1P43005 HSFY8P-201ENST00000437934 318 ntBASIC1.85□□□□□ -2.11
SLC1A1P43005 RPL22P17-201ENST00000438729 315 ntBASIC1.85□□□□□ -2.11
SLC1A1P43005 USP9YP15-201ENST00000442391 422 ntBASIC1.85□□□□□ -2.11
SLC1A1P43005 LINC02195-201ENST00000443373 294 ntTSL 3 BASIC1.85□□□□□ -2.11
SLC1A1P43005 DPP10-AS2-201ENST00000446992 624 ntTSL 5 BASIC1.85□□□□□ -2.11
SLC1A1P43005 ZNF736P5Y-201ENST00000451173 805 ntBASIC1.85□□□□□ -2.11
SLC1A1P43005 SSXP1-201ENST00000453640 473 ntBASIC1.85□□□□□ -2.11
SLC1A1P43005 HSFY5P-201ENST00000453726 309 ntBASIC1.85□□□□□ -2.11
SLC1A1P43005 CHRM3-AS2-203ENST00000458325 895 ntTSL 2 BASIC1.85□□□□□ -2.11
SLC1A1P43005 RPL7P43-201ENST00000478876 753 ntBASIC1.85□□□□□ -2.11
SLC1A1P43005 AC107032.1-201ENST00000485945 480 ntBASIC1.85□□□□□ -2.11
SLC1A1P43005 MRPS17P9-201ENST00000511924 393 ntBASIC1.85□□□□□ -2.11
SLC1A1P43005 SNORA4.4-201ENST00000515921 135 ntBASIC1.85□□□□□ -2.11
SLC1A1P43005 RNU2-10P-201ENST00000516375 211 ntBASIC1.85□□□□□ -2.11
SLC1A1P43005 AC090531.1-202ENST00000548450 499 ntTSL 3 BASIC1.85□□□□□ -2.11
SLC1A1P43005 AC123905.1-201ENST00000552098 541 ntTSL 4 BASIC1.85□□□□□ -2.11
SLC1A1P43005 PSMA3P-201ENST00000555485 635 ntBASIC1.85□□□□□ -2.11
SLC1A1P43005 AC110588.1-201ENST00000559699 137 ntBASIC1.85□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 107.4 ms