Protein–RNA interactions for Protein: P41225

SOX3, Transcription factor SOX-3, humanhuman

Predictions only

Length 446 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX3P41225 AC127024.3-201ENST00000582841 460 ntTSL 3 BASIC2.56□□□□□ -2
SOX3P41225 AC104365.1-201ENST00000588835 394 ntTSL 5 BASIC2.56□□□□□ -2
SOX3P41225 AL162413.1-201ENST00000603198 110 ntBASIC2.56□□□□□ -2
SOX3P41225 AL355598.1-201ENST00000604169 202 ntBASIC2.56□□□□□ -2
SOX3P41225 AC079610.3-201ENST00000606960 147 ntTSL 3 BASIC2.56□□□□□ -2
SOX3P41225 AC005046.1-201ENST00000608515 625 ntBASIC2.56□□□□□ -2
SOX3P41225 AL161629.2-201ENST00000615347 275 ntBASIC2.56□□□□□ -2
SOX3P41225 AC090617.7-201ENST00000623952 126 ntBASIC2.56□□□□□ -2
SOX3P41225 AC109471.3-201ENST00000625219 233 ntTSL 5 BASIC2.56□□□□□ -2
SOX3P41225 GYPB-216ENST00000638448 363 ntAPPRIS P1 TSL 1 (best) BASIC2.56□□□□□ -2
SOX3P41225 FGF14-201ENST00000376131 12882 ntTSL 1 (best) BASIC2.56□□□□□ -2
SOX3P41225 MCF2-208ENST00000519895 3346 ntAPPRIS ALT2 TSL 2 BASIC2.56□□□□□ -2
SOX3P41225 AC092435.3-201ENST00000565538 3654 ntBASIC2.55□□□□□ -2
SOX3P41225 APC-201ENST00000257430 10701 ntAPPRIS P1 TSL 5 BASIC2.55□□□□□ -2
SOX3P41225 RNU1-112P-201ENST00000364401 164 ntBASIC2.55□□□□□ -2
SOX3P41225 RNU4-12P-201ENST00000365233 139 ntBASIC2.55□□□□□ -2
SOX3P41225 SNORA75B-201ENST00000384053 137 ntBASIC2.55□□□□□ -2
SOX3P41225 MIR578-201ENST00000384828 96 ntBASIC2.55□□□□□ -2
SOX3P41225 RPL26P27-201ENST00000414397 437 ntBASIC2.55□□□□□ -2
SOX3P41225 USP9YP27-201ENST00000418455 438 ntBASIC2.55□□□□□ -2
SOX3P41225 AC016710.1-201ENST00000421326 466 ntTSL 3 BASIC2.55□□□□□ -2
SOX3P41225 MTCO1P20-201ENST00000425366 358 ntBASIC2.55□□□□□ -2
SOX3P41225 AL365496.1-201ENST00000426885 215 ntBASIC2.55□□□□□ -2
SOX3P41225 AL592466.1-201ENST00000428346 307 ntTSL 5 BASIC2.55□□□□□ -2
SOX3P41225 AC005160.1-201ENST00000432405 381 ntTSL 3 BASIC2.55□□□□□ -2
SOX3P41225 MTND4P14-201ENST00000435799 1354 ntBASIC2.55□□□□□ -2
SOX3P41225 ELF2P3-201ENST00000445099 1506 ntBASIC2.55□□□□□ -2
SOX3P41225 AC069542.1-201ENST00000445235 557 ntTSL 3 BASIC2.55□□□□□ -2
SOX3P41225 AC015983.2-201ENST00000446053 472 ntTSL 3 BASIC2.55□□□□□ -2
SOX3P41225 AL354685.2-201ENST00000448218 1447 ntBASIC2.55□□□□□ -2
SOX3P41225 SNRPFP3-201ENST00000457792 225 ntBASIC2.55□□□□□ -2
SOX3P41225 AC092798.1-201ENST00000458542 409 ntBASIC2.55□□□□□ -2
SOX3P41225 RNU7-180P-201ENST00000459240 63 ntBASIC2.55□□□□□ -2
SOX3P41225 AC008571.1-201ENST00000467232 300 ntBASIC2.55□□□□□ -2
SOX3P41225 AL121769.1-201ENST00000469473 401 ntBASIC2.55□□□□□ -2
SOX3P41225 AC003982.1-202ENST00000469928 248 ntBASIC2.55□□□□□ -2
SOX3P41225 RPS29P20-201ENST00000489592 171 ntBASIC2.55□□□□□ -2
SOX3P41225 AC026801.1-201ENST00000497178 464 ntBASIC2.55□□□□□ -2
SOX3P41225 LINC02377-202ENST00000505436 523 ntTSL 5 BASIC2.55□□□□□ -2
SOX3P41225 MTCO3P9-201ENST00000506989 781 ntBASIC2.55□□□□□ -2
SOX3P41225 AC034223.1-201ENST00000511054 599 ntTSL 3 BASIC2.55□□□□□ -2
SOX3P41225 LRRC34P2-201ENST00000514850 553 ntBASIC2.55□□□□□ -2
SOX3P41225 RNA5SP401-201ENST00000515920 127 ntBASIC2.55□□□□□ -2
SOX3P41225 SNORA9.3-201ENST00000516383 129 ntBASIC2.55□□□□□ -2
SOX3P41225 MTND4LP26-201ENST00000518144 282 ntBASIC2.55□□□□□ -2
SOX3P41225 AC104237.1-201ENST00000527443 539 ntTSL 4 BASIC2.55□□□□□ -2
SOX3P41225 AC109635.3-201ENST00000529536 185 ntBASIC2.55□□□□□ -2
SOX3P41225 AL137161.1-201ENST00000532231 390 ntBASIC2.55□□□□□ -2
SOX3P41225 MIR4319-201ENST00000577285 85 ntBASIC2.55□□□□□ -2
SOX3P41225 MIR548AC-201ENST00000585049 88 ntBASIC2.55□□□□□ -2
SOX3P41225 ZNF861P-201ENST00000588126 639 ntBASIC2.55□□□□□ -2
SOX3P41225 MTND4LP5-201ENST00000605152 292 ntBASIC2.55□□□□□ -2
SOX3P41225 HOTTIP_4.1-201ENST00000618195 165 ntBASIC2.55□□□□□ -2
SOX3P41225 AC026585.1-201ENST00000619582 524 ntBASIC2.55□□□□□ -2
SOX3P41225 AP003122.6-201ENST00000623831 495 ntBASIC2.55□□□□□ -2
SOX3P41225 SCN1A-219ENST00000641575 12874 ntAPPRIS ALT1 BASIC2.55□□□□□ -2
SOX3P41225 FOXP2-210ENST00000403559 6415 ntTSL 2 BASIC2.55□□□□□ -2
SOX3P41225 FAM214A-201ENST00000261844 4217 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
SOX3P41225 ACTR6-212ENST00000552376 1659 ntTSL 5 BASIC2.54□□□□□ -2
SOX3P41225 FAM46D-201ENST00000308293 3011 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
SOX3P41225 ZMYM1-201ENST00000359858 4175 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
SOX3P41225 RNU6-1090P-201ENST00000364065 94 ntBASIC2.54□□□□□ -2
SOX3P41225 S100A12-201ENST00000368737 518 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
SOX3P41225 SNORA40C-201ENST00000391285 128 ntBASIC2.54□□□□□ -2
SOX3P41225 RNU6ATAC25P-201ENST00000408798 117 ntBASIC2.54□□□□□ -2
SOX3P41225 RPL21P90-201ENST00000415692 466 ntBASIC2.54□□□□□ -2
SOX3P41225 AL160162.1-202ENST00000417654 244 ntTSL 3 BASIC2.54□□□□□ -2
SOX3P41225 BPY2DP-201ENST00000422208 265 ntBASIC2.54□□□□□ -2
SOX3P41225 AC098614.2-201ENST00000426040 255 ntBASIC2.54□□□□□ -2
SOX3P41225 LINC00407-201ENST00000426509 295 ntTSL 5 BASIC2.54□□□□□ -2
SOX3P41225 AP001117.1-201ENST00000428205 609 ntTSL 2 BASIC2.54□□□□□ -2
SOX3P41225 HMGB1P9-201ENST00000429856 646 ntBASIC2.54□□□□□ -2
SOX3P41225 AF124730.1-201ENST00000430001 327 ntTSL 2 BASIC2.54□□□□□ -2
SOX3P41225 AC000111.3-201ENST00000433478 193 ntBASIC2.54□□□□□ -2
SOX3P41225 AL513043.1-201ENST00000439124 535 ntBASIC2.54□□□□□ -2
SOX3P41225 LINC00393-201ENST00000443621 282 ntTSL 3 BASIC2.54□□□□□ -2
SOX3P41225 AC092567.1-201ENST00000452397 251 ntTSL 3 BASIC2.54□□□□□ -2
SOX3P41225 AL160162.1-201ENST00000456715 442 ntTSL 3 BASIC2.54□□□□□ -2
SOX3P41225 RPL26P9-201ENST00000457466 433 ntBASIC2.54□□□□□ -2
SOX3P41225 SNORA59A-201ENST00000459326 152 ntBASIC2.54□□□□□ -2
SOX3P41225 MTAPP1-201ENST00000489154 819 ntBASIC2.54□□□□□ -2
SOX3P41225 RPS27AP10-201ENST00000496103 208 ntBASIC2.54□□□□□ -2
SOX3P41225 AC114786.4-201ENST00000508771 728 ntBASIC2.54□□□□□ -2
SOX3P41225 SNORA31.21-201ENST00000517180 77 ntBASIC2.54□□□□□ -2
SOX3P41225 AC021698.1-201ENST00000524858 716 ntTSL 3 BASIC2.54□□□□□ -2
SOX3P41225 NACAP3-201ENST00000552100 481 ntBASIC2.54□□□□□ -2
SOX3P41225 LINC02309-201ENST00000553679 207 ntTSL 3 BASIC2.54□□□□□ -2
SOX3P41225 LINC02305-201ENST00000554142 476 ntTSL 3 BASIC2.54□□□□□ -2
SOX3P41225 AL138976.2-201ENST00000563989 694 ntBASIC2.54□□□□□ -2
SOX3P41225 FOPNL-205ENST00000573429 646 ntTSL 3 BASIC2.54□□□□□ -2
SOX3P41225 MIR5692A1-201ENST00000580523 69 ntBASIC2.54□□□□□ -2
SOX3P41225 MIR4424-201ENST00000585257 86 ntBASIC2.54□□□□□ -2
SOX3P41225 HMGN2P15-201ENST00000585707 270 ntBASIC2.54□□□□□ -2
SOX3P41225 LINC01897-203ENST00000591503 369 ntTSL 2 BASIC2.54□□□□□ -2
SOX3P41225 AC107304.1-201ENST00000604229 296 ntBASIC2.54□□□□□ -2
SOX3P41225 AP000787.2-201ENST00000604432 568 ntBASIC2.54□□□□□ -2
SOX3P41225 U6atac.1-201ENST00000616025 117 ntBASIC2.54□□□□□ -2
SOX3P41225 MIR6852-201ENST00000621699 66 ntBASIC2.54□□□□□ -2
SOX3P41225 YWHAEP7-203ENST00000622054 312 ntBASIC2.54□□□□□ -2
SOX3P41225 IL33-203ENST00000456383 2501 ntTSL 5 BASIC2.54□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 79.5 ms