Protein–RNA interactions for Protein: P38398

BRCA1, Breast cancer type 1 susceptibility protein, humanhuman

Known RBP Predictions only

Length 1,863 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1P38398 AC006026.1-201ENST00000444025 1803 ntBASIC1.83□□□□□ -2.12
BRCA1P38398 AP000776.1-201ENST00000530032 1663 ntBASIC1.83□□□□□ -2.12
BRCA1P38398 TBL1XR1-208ENST00000430069 7948 ntAPPRIS P1 TSL 1 (best) BASIC1.83□□□□□ -2.12
BRCA1P38398 MIR561-201ENST00000385216 97 ntBASIC1.82□□□□□ -2.12
BRCA1P38398 AL354695.1-201ENST00000427935 228 ntBASIC1.82□□□□□ -2.12
BRCA1P38398 GSAP-208ENST00000441833 737 ntTSL 1 (best) BASIC1.82□□□□□ -2.12
BRCA1P38398 EXOSC3P1-201ENST00000448649 500 ntBASIC1.82□□□□□ -2.12
BRCA1P38398 USP9YP25-201ENST00000457708 443 ntBASIC1.82□□□□□ -2.12
BRCA1P38398 RPS27AP10-201ENST00000496103 208 ntBASIC1.82□□□□□ -2.12
BRCA1P38398 AC093297.2-205ENST00000508123 572 ntTSL 3 BASIC1.82□□□□□ -2.12
BRCA1P38398 HTN1-204ENST00000511674 623 ntAPPRIS P1 TSL 2 BASIC1.82□□□□□ -2.12
BRCA1P38398 RNU6-572P-201ENST00000516724 80 ntBASIC1.82□□□□□ -2.12
BRCA1P38398 AP002884.4-201ENST00000527589 594 ntTSL 3 BASIC1.82□□□□□ -2.12
BRCA1P38398 AC011604.1-201ENST00000545978 196 ntBASIC1.82□□□□□ -2.12
BRCA1P38398 AL137100.2-201ENST00000555786 315 ntBASIC1.82□□□□□ -2.12
BRCA1P38398 AL049869.2-201ENST00000556634 365 ntTSL 2 BASIC1.82□□□□□ -2.12
BRCA1P38398 MIR4293-201ENST00000584305 78 ntBASIC1.82□□□□□ -2.12
BRCA1P38398 AC092296.3-201ENST00000589968 249 ntTSL 3 BASIC1.82□□□□□ -2.12
BRCA1P38398 AC078899.2-201ENST00000595282 212 ntBASIC1.82□□□□□ -2.12
BRCA1P38398 AL158042.1-201ENST00000605338 460 ntBASIC1.82□□□□□ -2.12
BRCA1P38398 AC005296.1-201ENST00000616145 209 ntBASIC1.82□□□□□ -2.12
BRCA1P38398 TRIQK-212ENST00000520686 1808 ntAPPRIS P1 TSL 1 (best) BASIC1.82□□□□□ -2.12
BRCA1P38398 SCN7A-206ENST00000619410 7186 ntAPPRIS P1 TSL 5 BASIC1.82□□□□□ -2.12
BRCA1P38398 SCN7A-207ENST00000621965 7186 ntAPPRIS P1 TSL 5 BASIC1.82□□□□□ -2.12
BRCA1P38398 RNY1-201ENST00000364228 113 ntBASIC1.82□□□□□ -2.12
BRCA1P38398 RNU4-22P-201ENST00000411058 166 ntBASIC1.82□□□□□ -2.12
BRCA1P38398 LURAP1L-AS1-201ENST00000417638 799 ntTSL 3 BASIC1.82□□□□□ -2.12
BRCA1P38398 AL136980.1-201ENST00000426764 543 ntTSL 3 BASIC1.82□□□□□ -2.12
BRCA1P38398 LINC01674-201ENST00000427446 504 ntTSL 3 BASIC1.82□□□□□ -2.12
BRCA1P38398 RPS29P29-201ENST00000456396 171 ntBASIC1.82□□□□□ -2.12
BRCA1P38398 AC093899.1-201ENST00000457984 376 ntBASIC1.82□□□□□ -2.12
BRCA1P38398 AHI1-208ENST00000488690 712 ntTSL 5 BASIC1.82□□□□□ -2.12
BRCA1P38398 AC021146.8-201ENST00000507455 733 ntBASIC1.82□□□□□ -2.12
BRCA1P38398 SNORA31.3-201ENST00000516029 96 ntBASIC1.82□□□□□ -2.12
BRCA1P38398 MIR449C-201ENST00000516047 92 ntBASIC1.82□□□□□ -2.12
BRCA1P38398 AP005902.1-201ENST00000521358 186 ntBASIC1.82□□□□□ -2.12
BRCA1P38398 AC023813.2-201ENST00000564321 469 ntBASIC1.82□□□□□ -2.12
BRCA1P38398 MIR5194-201ENST00000582634 120 ntBASIC1.82□□□□□ -2.12
BRCA1P38398 MIR151B-201ENST00000584249 96 ntBASIC1.82□□□□□ -2.12
BRCA1P38398 AC012493.3-201ENST00000604494 112 ntBASIC1.82□□□□□ -2.12
BRCA1P38398 RNU1-22P-201ENST00000363334 158 ntBASIC1.81□□□□□ -2.12
BRCA1P38398 RNU4-92P-201ENST00000363783 136 ntBASIC1.81□□□□□ -2.12
BRCA1P38398 MIR144-201ENST00000384886 86 ntBASIC1.81□□□□□ -2.12
BRCA1P38398 MIR95-201ENST00000385072 81 ntBASIC1.81□□□□□ -2.12
BRCA1P38398 RNA5SP489-201ENST00000410986 109 ntBASIC1.81□□□□□ -2.12
BRCA1P38398 AC106883.1-201ENST00000418805 562 ntBASIC1.81□□□□□ -2.12
BRCA1P38398 AC016691.1-201ENST00000441321 413 ntBASIC1.81□□□□□ -2.12
BRCA1P38398 LINC01766-201ENST00000453968 362 ntTSL 3 BASIC1.81□□□□□ -2.12
BRCA1P38398 AC005538.1-201ENST00000455991 594 ntTSL 3 BASIC1.81□□□□□ -2.12
BRCA1P38398 AC112771.1-201ENST00000463581 102 ntBASIC1.81□□□□□ -2.12
BRCA1P38398 SNORA31.25-201ENST00000517242 134 ntBASIC1.81□□□□□ -2.12
BRCA1P38398 AP003128.1-201ENST00000531414 448 ntTSL 2 BASIC1.81□□□□□ -2.12
BRCA1P38398 MRPS36P5-201ENST00000551909 298 ntBASIC1.81□□□□□ -2.12
BRCA1P38398 CR936218.1-201ENST00000570454 304 ntTSL 2 BASIC1.81□□□□□ -2.12
BRCA1P38398 AL133216.2-202ENST00000634512 349 ntBASIC1.81□□□□□ -2.12
BRCA1P38398 RNU6-853P-201ENST00000364306 107 ntBASIC1.8□□□□□ -2.12
BRCA1P38398 EEF1E1-201ENST00000379715 1077 ntAPPRIS P1 TSL 1 (best) BASIC1.8□□□□□ -2.12
BRCA1P38398 AL139397.2-201ENST00000404529 772 ntBASIC1.8□□□□□ -2.12
BRCA1P38398 GPC5-IT1-201ENST00000416664 658 ntTSL 3 BASIC1.8□□□□□ -2.12
BRCA1P38398 AC137499.1-201ENST00000427602 88 ntBASIC1.8□□□□□ -2.12
BRCA1P38398 GJE1-201ENST00000450456 916 ntAPPRIS P1 TSL 5 BASIC1.8□□□□□ -2.12
BRCA1P38398 AC108059.3-201ENST00000456388 214 ntBASIC1.8□□□□□ -2.12
BRCA1P38398 AC117460.1-201ENST00000508964 467 ntTSL 3 BASIC1.8□□□□□ -2.12
BRCA1P38398 LINC02174-201ENST00000508977 553 ntTSL 3 BASIC1.8□□□□□ -2.12
BRCA1P38398 OR5AQ1P-201ENST00000527596 927 ntBASIC1.8□□□□□ -2.12
BRCA1P38398 AC093012.1-202ENST00000549403 582 ntBASIC1.8□□□□□ -2.12
BRCA1P38398 AC105245.1-201ENST00000581934 244 ntBASIC1.8□□□□□ -2.12
BRCA1P38398 MIR544B-201ENST00000582372 78 ntBASIC1.8□□□□□ -2.12
BRCA1P38398 AL355297.2-201ENST00000604792 129 ntBASIC1.8□□□□□ -2.12
BRCA1P38398 AL021997.1-201ENST00000605757 193 ntBASIC1.8□□□□□ -2.12
BRCA1P38398 RNU4-5P-201ENST00000607255 135 ntBASIC1.8□□□□□ -2.12
BRCA1P38398 UGP2-231ENST00000627474 264 ntTSL 5 BASIC1.8□□□□□ -2.12
BRCA1P38398 DEFB107A-201ENST00000335021 389 ntAPPRIS P1 TSL 1 (best) BASIC1.8□□□□□ -2.12
BRCA1P38398 DEFB107B-201ENST00000355602 389 ntAPPRIS P1 TSL 1 (best) BASIC1.8□□□□□ -2.12
BRCA1P38398 SNORA67.6-201ENST00000391093 99 ntBASIC1.8□□□□□ -2.12
BRCA1P38398 ERHP2-201ENST00000402323 299 ntBASIC1.8□□□□□ -2.12
BRCA1P38398 AC078974.1-201ENST00000411597 223 ntBASIC1.8□□□□□ -2.12
BRCA1P38398 MRLN-201ENST00000414264 422 ntAPPRIS P2 TSL 1 (best) BASIC1.8□□□□□ -2.12
BRCA1P38398 LINC00397-201ENST00000422074 344 ntTSL 3 BASIC1.8□□□□□ -2.12
BRCA1P38398 AL353777.1-201ENST00000425552 326 ntBASIC1.8□□□□□ -2.12
BRCA1P38398 RPL36AP53-201ENST00000432891 316 ntBASIC1.8□□□□□ -2.12
BRCA1P38398 AL356475.1-201ENST00000440321 341 ntTSL 5 BASIC1.8□□□□□ -2.12
BRCA1P38398 AL161788.1-201ENST00000441805 169 ntBASIC1.8□□□□□ -2.12
BRCA1P38398 KATNBL1P6-201ENST00000453433 915 ntBASIC1.8□□□□□ -2.12
BRCA1P38398 RNA5SP112-201ENST00000515937 99 ntBASIC1.8□□□□□ -2.12
BRCA1P38398 RNU2-10P-201ENST00000516375 211 ntBASIC1.8□□□□□ -2.12
BRCA1P38398 AC019176.1-201ENST00000518519 225 ntBASIC1.8□□□□□ -2.12
BRCA1P38398 AL359212.1-201ENST00000556608 614 ntBASIC1.8□□□□□ -2.12
BRCA1P38398 MIR3935-201ENST00000583472 104 ntBASIC1.8□□□□□ -2.12
BRCA1P38398 AC107214.2-201ENST00000608204 634 ntBASIC1.8□□□□□ -2.12
BRCA1P38398 AC090970.3-201ENST00000612566 866 ntBASIC1.8□□□□□ -2.12
BRCA1P38398 FRG1KP-201ENST00000623592 341 ntBASIC1.8□□□□□ -2.12
BRCA1P38398 AC025048.6-202ENST00000627667 438 ntBASIC1.8□□□□□ -2.12
BRCA1P38398 AC097655.1-201ENST00000635075 318 ntBASIC1.8□□□□□ -2.12
BRCA1P38398 GPR22-201ENST00000304402 2942 ntAPPRIS P1 TSL 1 (best) BASIC1.79□□□□□ -2.12
BRCA1P38398 SNX10-209ENST00000619420 2361 ntAPPRIS ALT1 TSL 5 BASIC1.79□□□□□ -2.12
BRCA1P38398 RNY3P13-201ENST00000365542 102 ntBASIC1.79□□□□□ -2.12
BRCA1P38398 RNU5E-6P-201ENST00000365574 115 ntBASIC1.79□□□□□ -2.12
BRCA1P38398 SNORA40.19-201ENST00000390846 128 ntBASIC1.79□□□□□ -2.12
BRCA1P38398 AC119751.3-201ENST00000399720 670 ntBASIC1.79□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 116.6 ms