Protein–RNA interactions for Protein: P35443

THBS4, Thrombospondin-4, humanhuman

Predictions only

Length 961 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
THBS4P35443 AC016925.2-201ENST00000605108 242 ntBASIC3.25□□□□□ -1.89
THBS4P35443 SNORA62.6-201ENST00000606322 83 ntBASIC3.25□□□□□ -1.89
THBS4P35443 ATG5-207ENST00000613993 733 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
THBS4P35443 SMAD5-AS1_1.1-201ENST00000619886 266 ntBASIC3.25□□□□□ -1.89
THBS4P35443 AC006111.3-201ENST00000622137 383 ntBASIC3.25□□□□□ -1.89
THBS4P35443 SNORA50A-202ENST00000629536 136 ntBASIC3.25□□□□□ -1.89
THBS4P35443 AL669831.3-213ENST00000636676 183 ntBASIC3.25□□□□□ -1.89
THBS4P35443 U6.99-201ENST00000637524 83 ntBASIC3.25□□□□□ -1.89
THBS4P35443 AC128685.1-201ENST00000490357 1834 ntTSL 5 BASIC3.25□□□□□ -1.89
THBS4P35443 SRP72P2-201ENST00000344851 1979 ntBASIC3.25□□□□□ -1.89
THBS4P35443 MTND5P19-201ENST00000424872 1794 ntBASIC3.25□□□□□ -1.89
THBS4P35443 USP33-201ENST00000357428 4155 ntTSL 5 BASIC3.25□□□□□ -1.89
THBS4P35443 KPNA2P1-201ENST00000458289 1591 ntBASIC3.25□□□□□ -1.89
THBS4P35443 PGGT1B-203ENST00000419445 9545 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
THBS4P35443 CUL4B-202ENST00000371322 4902 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
THBS4P35443 RAPGEF6-210ENST00000512052 3535 ntTSL 2 BASIC3.24□□□□□ -1.89
THBS4P35443 Y_RNA.216-201ENST00000364205 93 ntBASIC3.24□□□□□ -1.89
THBS4P35443 RNU6-658P-201ENST00000384606 106 ntBASIC3.24□□□□□ -1.89
THBS4P35443 MIR23B-201ENST00000384832 97 ntBASIC3.24□□□□□ -1.89
THBS4P35443 MIR200C-201ENST00000384980 68 ntBASIC3.24□□□□□ -1.89
THBS4P35443 MIR591-201ENST00000385290 95 ntBASIC3.24□□□□□ -1.89
THBS4P35443 AC106873.1-201ENST00000420664 459 ntTSL 3 BASIC3.24□□□□□ -1.89
THBS4P35443 U51244.1-201ENST00000423120 374 ntTSL 3 BASIC3.24□□□□□ -1.89
THBS4P35443 ELOCP24-201ENST00000456370 334 ntBASIC3.24□□□□□ -1.89
THBS4P35443 snoU13.28-201ENST00000459235 104 ntBASIC3.24□□□□□ -1.89
THBS4P35443 RNU7-138P-201ENST00000459479 64 ntBASIC3.24□□□□□ -1.89
THBS4P35443 AL163540.1-201ENST00000485382 386 ntBASIC3.24□□□□□ -1.89
THBS4P35443 HMGN1P11-201ENST00000508668 303 ntBASIC3.24□□□□□ -1.89
THBS4P35443 AC096745.1-201ENST00000509945 370 ntBASIC3.24□□□□□ -1.89
THBS4P35443 LINC02122-201ENST00000511395 577 ntTSL 4 BASIC3.24□□□□□ -1.89
THBS4P35443 PHBP14-201ENST00000512887 367 ntBASIC3.24□□□□□ -1.89
THBS4P35443 SNORA31.1-201ENST00000515993 133 ntBASIC3.24□□□□□ -1.89
THBS4P35443 SNORA31.5-201ENST00000516190 133 ntBASIC3.24□□□□□ -1.89
THBS4P35443 RNU6-1183P-201ENST00000517054 60 ntBASIC3.24□□□□□ -1.89
THBS4P35443 RGS4-209ENST00000531057 544 ntTSL 4 BASIC3.24□□□□□ -1.89
THBS4P35443 SNRPGP18-201ENST00000553000 214 ntBASIC3.24□□□□□ -1.89
THBS4P35443 CYCSP39-201ENST00000565821 309 ntBASIC3.24□□□□□ -1.89
THBS4P35443 MIR4429-201ENST00000580105 73 ntBASIC3.24□□□□□ -1.89
THBS4P35443 MIR5187-201ENST00000583479 76 ntBASIC3.24□□□□□ -1.89
THBS4P35443 AC090772.1-201ENST00000583782 507 ntTSL 5 BASIC3.24□□□□□ -1.89
THBS4P35443 ZFP30-209ENST00000589018 444 ntTSL 5 BASIC3.24□□□□□ -1.89
THBS4P35443 AL355802.3-201ENST00000607571 545 ntBASIC3.24□□□□□ -1.89
THBS4P35443 AC092636.1-201ENST00000608609 415 ntTSL 2 BASIC3.24□□□□□ -1.89
THBS4P35443 CCNYL2-203ENST00000638057 730 ntTSL 3 BASIC3.24□□□□□ -1.89
THBS4P35443 OR5K1-202ENST00000642057 3466 ntAPPRIS P1 BASIC3.24□□□□□ -1.89
THBS4P35443 CYLC2-204ENST00000612124 1817 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
THBS4P35443 MCF2-202ENST00000370573 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC3.23□□□□□ -1.89
THBS4P35443 MS4A1-212ENST00000534668 3475 ntAPPRIS P1 TSL 2 BASIC3.23□□□□□ -1.89
THBS4P35443 MTND5P7-201ENST00000413558 1798 ntBASIC3.23□□□□□ -1.89
THBS4P35443 TRIM36-201ENST00000282369 4050 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
THBS4P35443 Y_RNA.197-201ENST00000364004 102 ntBASIC3.23□□□□□ -1.89
THBS4P35443 Y_RNA.324-201ENST00000365165 102 ntBASIC3.23□□□□□ -1.89
THBS4P35443 SNORA33.2-201ENST00000365413 134 ntBASIC3.23□□□□□ -1.89
THBS4P35443 LINC00862-202ENST00000367356 759 ntTSL 3 BASIC3.23□□□□□ -1.89
THBS4P35443 MIR10A-201ENST00000385043 110 ntBASIC3.23□□□□□ -1.89
THBS4P35443 AL590632.1-201ENST00000424289 371 ntBASIC3.23□□□□□ -1.89
THBS4P35443 HMGB1P9-201ENST00000429856 646 ntBASIC3.23□□□□□ -1.89
THBS4P35443 AL583835.2-201ENST00000435483 500 ntTSL 2 BASIC3.23□□□□□ -1.89
THBS4P35443 HMGN2P20-201ENST00000437531 273 ntBASIC3.23□□□□□ -1.89
THBS4P35443 ATP2B2-IT1-201ENST00000440152 472 ntTSL 3 BASIC3.23□□□□□ -1.89
THBS4P35443 AL138921.2-201ENST00000443919 578 ntTSL 5 BASIC3.23□□□□□ -1.89
THBS4P35443 AC025918.1-201ENST00000452467 383 ntTSL 3 BASIC3.23□□□□□ -1.89
THBS4P35443 RPL26P9-201ENST00000457466 433 ntBASIC3.23□□□□□ -1.89
THBS4P35443 RPS27AP10-201ENST00000496103 208 ntBASIC3.23□□□□□ -1.89
THBS4P35443 Y_RNA.708-201ENST00000516950 96 ntBASIC3.23□□□□□ -1.89
THBS4P35443 AC103957.1-201ENST00000517681 503 ntTSL 3 BASIC3.23□□□□□ -1.89
THBS4P35443 AC009623.2-201ENST00000522524 465 ntTSL 3 BASIC3.23□□□□□ -1.89
THBS4P35443 AC007991.1-201ENST00000522680 631 ntBASIC3.23□□□□□ -1.89
THBS4P35443 AC092747.1-202ENST00000540595 380 ntTSL 5 BASIC3.23□□□□□ -1.89
THBS4P35443 AC092490.2-202ENST00000544922 462 ntTSL 3 BASIC3.23□□□□□ -1.89
THBS4P35443 MIR4782-201ENST00000577987 79 ntBASIC3.23□□□□□ -1.89
THBS4P35443 NUTF2P8-201ENST00000604593 363 ntBASIC3.23□□□□□ -1.89
THBS4P35443 LINC02112-205ENST00000606744 236 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
THBS4P35443 HIKESHI-208ENST00000618164 499 ntTSL 5 BASIC3.23□□□□□ -1.89
THBS4P35443 PLCE1P1-201ENST00000622094 305 ntBASIC3.23□□□□□ -1.89
THBS4P35443 AC012442.3-202ENST00000636742 206 ntBASIC3.23□□□□□ -1.89
THBS4P35443 CEP85L-202ENST00000368488 7118 ntTSL 5 BASIC3.23□□□□□ -1.89
THBS4P35443 EVI5-201ENST00000370331 7403 ntAPPRIS P3 TSL 1 (best) BASIC3.23□□□□□ -1.89
THBS4P35443 CCDC82-201ENST00000278520 2941 ntAPPRIS P2 TSL 5 BASIC3.23□□□□□ -1.89
THBS4P35443 AC010680.1-201ENST00000590024 3590 ntBASIC3.22□□□□□ -1.89
THBS4P35443 DOCK7-202ENST00000340370 6731 ntAPPRIS P3 TSL 2 BASIC3.22□□□□□ -1.89
THBS4P35443 SNX10-209ENST00000619420 2361 ntAPPRIS ALT1 TSL 5 BASIC3.22□□□□□ -1.89
THBS4P35443 CCDC141-202ENST00000409284 6960 ntAPPRIS P2 TSL 1 (best) BASIC3.22□□□□□ -1.89
THBS4P35443 Z98749.2-208ENST00000381646 500 ntBASIC3.22□□□□□ -1.89
THBS4P35443 RNU6-639P-201ENST00000384074 107 ntBASIC3.22□□□□□ -1.89
THBS4P35443 RNU6-738P-201ENST00000384531 106 ntBASIC3.22□□□□□ -1.89
THBS4P35443 RNU6-1160P-201ENST00000384546 104 ntBASIC3.22□□□□□ -1.89
THBS4P35443 RNU6-310P-201ENST00000384655 107 ntBASIC3.22□□□□□ -1.89
THBS4P35443 AL592435.1-201ENST00000416401 469 ntTSL 3 BASIC3.22□□□□□ -1.89
THBS4P35443 AL160162.1-202ENST00000417654 244 ntTSL 3 BASIC3.22□□□□□ -1.89
THBS4P35443 ATG3P1-201ENST00000419507 911 ntBASIC3.22□□□□□ -1.89
THBS4P35443 AL035423.1-201ENST00000420331 213 ntBASIC3.22□□□□□ -1.89
THBS4P35443 RPS15AP6-201ENST00000420703 385 ntBASIC3.22□□□□□ -1.89
THBS4P35443 RPL7P37-201ENST00000425095 738 ntBASIC3.22□□□□□ -1.89
THBS4P35443 RPS29P31-201ENST00000446147 164 ntBASIC3.22□□□□□ -1.89
THBS4P35443 MTCO3P10-201ENST00000455912 772 ntBASIC3.22□□□□□ -1.89
THBS4P35443 MIR2053-201ENST00000459295 91 ntBASIC3.22□□□□□ -1.89
THBS4P35443 AP002884.2-201ENST00000471647 395 ntBASIC3.22□□□□□ -1.89
THBS4P35443 LINC02103-201ENST00000512849 523 ntTSL 5 BASIC3.22□□□□□ -1.89
THBS4P35443 RNU1-95P-201ENST00000516357 160 ntBASIC3.22□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 109.9 ms