Protein–RNA interactions for Protein: P34897

SHMT2, Serine hydroxymethyltransferase, mitochondrial, humanhuman

Predictions only

Length 504 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2P34897 AC117386.2-202ENST00000472821 522 ntTSL 3 BASIC2.07□□□□□ -2.08
SHMT2P34897 AC010486.2-201ENST00000505572 483 ntBASIC2.07□□□□□ -2.08
SHMT2P34897 AC093206.1-201ENST00000515364 497 ntTSL 3 BASIC2.07□□□□□ -2.08
SHMT2P34897 RNU6-581P-201ENST00000516214 105 ntBASIC2.07□□□□□ -2.08
SHMT2P34897 Y_RNA.689-201ENST00000516589 107 ntBASIC2.07□□□□□ -2.08
SHMT2P34897 AC108471.2-204ENST00000526807 784 ntTSL 5 BASIC2.07□□□□□ -2.08
SHMT2P34897 MIR3945-201ENST00000581853 98 ntBASIC2.07□□□□□ -2.08
SHMT2P34897 MIR3199-1-201ENST00000582434 88 ntBASIC2.07□□□□□ -2.08
SHMT2P34897 ZNF788-206ENST00000596883 692 ntTSL 3 BASIC2.07□□□□□ -2.08
SHMT2P34897 AL022154.1-201ENST00000604698 785 ntBASIC2.07□□□□□ -2.08
SHMT2P34897 AC025048.6-202ENST00000627667 438 ntBASIC2.07□□□□□ -2.08
SHMT2P34897 MIR219B-201ENST00000637023 88 ntBASIC2.07□□□□□ -2.08
SHMT2P34897 OR2L2-202ENST00000641771 4300 ntAPPRIS P1 BASIC2.07□□□□□ -2.08
SHMT2P34897 AC092881.1-201ENST00000638218 2733 ntBASIC2.07□□□□□ -2.08
SHMT2P34897 AC131280.1-202ENST00000624067 4211 ntBASIC2.07□□□□□ -2.08
SHMT2P34897 IL33-202ENST00000417746 2327 ntTSL 2 BASIC2.06□□□□□ -2.08
SHMT2P34897 Y_RNA.33-201ENST00000362591 102 ntBASIC2.06□□□□□ -2.08
SHMT2P34897 U8.3-201ENST00000363321 132 ntBASIC2.06□□□□□ -2.08
SHMT2P34897 SNORA38-201ENST00000363946 132 ntBASIC2.06□□□□□ -2.08
SHMT2P34897 RNA5SP160-201ENST00000364866 120 ntBASIC2.06□□□□□ -2.08
SHMT2P34897 RNU6-166P-201ENST00000384371 107 ntBASIC2.06□□□□□ -2.08
SHMT2P34897 AL161935.1-201ENST00000420945 421 ntTSL 3 BASIC2.06□□□□□ -2.08
SHMT2P34897 MTCO3P30-201ENST00000426425 670 ntBASIC2.06□□□□□ -2.08
SHMT2P34897 MED13P1-201ENST00000428342 171 ntBASIC2.06□□□□□ -2.08
SHMT2P34897 AC104850.1-201ENST00000435940 476 ntBASIC2.06□□□□□ -2.08
SHMT2P34897 AC004383.1-201ENST00000438135 289 ntBASIC2.06□□□□□ -2.08
SHMT2P34897 LINC01628-201ENST00000444266 397 ntTSL 2 BASIC2.06□□□□□ -2.08
SHMT2P34897 AL078601.1-201ENST00000444542 271 ntBASIC2.06□□□□□ -2.08
SHMT2P34897 AL355997.1-202ENST00000454361 610 ntTSL 3 BASIC2.06□□□□□ -2.08
SHMT2P34897 SNRPFP4-201ENST00000456366 242 ntBASIC2.06□□□□□ -2.08
SHMT2P34897 AP001324.2-201ENST00000461163 319 ntBASIC2.06□□□□□ -2.08
SHMT2P34897 FSBP-201ENST00000481490 1158 ntTSL 1 (best) BASIC2.06□□□□□ -2.08
SHMT2P34897 AC079943.2-201ENST00000488999 716 ntTSL 3 BASIC2.06□□□□□ -2.08
SHMT2P34897 AC023194.1-201ENST00000493084 308 ntBASIC2.06□□□□□ -2.08
SHMT2P34897 FAM92A1P2-202ENST00000504766 877 ntBASIC2.06□□□□□ -2.08
SHMT2P34897 AC023141.11-201ENST00000508864 202 ntBASIC2.06□□□□□ -2.08
SHMT2P34897 AC124854.1-202ENST00000513779 339 ntTSL 3 BASIC2.06□□□□□ -2.08
SHMT2P34897 RNU2-46P-201ENST00000517038 113 ntBASIC2.06□□□□□ -2.08
SHMT2P34897 AC022784.2-201ENST00000521298 328 ntTSL 2 BASIC2.06□□□□□ -2.08
SHMT2P34897 AC060788.1-201ENST00000521318 469 ntBASIC2.06□□□□□ -2.08
SHMT2P34897 AL352955.1-201ENST00000555490 332 ntTSL 3 BASIC2.06□□□□□ -2.08
SHMT2P34897 MIR1273C-201ENST00000578669 77 ntBASIC2.06□□□□□ -2.08
SHMT2P34897 NRBF2P1-201ENST00000587407 859 ntBASIC2.06□□□□□ -2.08
SHMT2P34897 AC006504.5-204ENST00000592404 765 ntTSL 3 BASIC2.06□□□□□ -2.08
SHMT2P34897 BNIP3P8-201ENST00000597863 560 ntBASIC2.06□□□□□ -2.08
SHMT2P34897 ZNRD1-AS1_3.8-201ENST00000611686 104 ntBASIC2.06□□□□□ -2.08
SHMT2P34897 AC010678.1-201ENST00000614118 713 ntBASIC2.06□□□□□ -2.08
SHMT2P34897 HMGB1P24-202ENST00000615653 685 ntBASIC2.06□□□□□ -2.08
SHMT2P34897 PISRT1-201ENST00000626175 531 ntBASIC2.06□□□□□ -2.08
SHMT2P34897 MIR7157-201ENST00000635801 60 ntBASIC2.06□□□□□ -2.08
SHMT2P34897 HMHB1-202ENST00000638299 126 ntAPPRIS P2 TSL 1 (best) BASIC2.06□□□□□ -2.08
SHMT2P34897 MTND4P27-201ENST00000450813 1354 ntBASIC2.06□□□□□ -2.08
SHMT2P34897 ANKRD36BP1-202ENST00000604892 1417 ntBASIC2.06□□□□□ -2.08
SHMT2P34897 ZCCHC10-202ENST00000355372 2160 ntAPPRIS ALT2 TSL 2 BASIC2.06□□□□□ -2.08
SHMT2P34897 TEX21P-201ENST00000447107 1476 ntBASIC2.06□□□□□ -2.08
SHMT2P34897 CEP57L1-203ENST00000368970 1680 ntAPPRIS ALT2 TSL 5 BASIC2.06□□□□□ -2.08
SHMT2P34897 OR13G1-202ENST00000642119 2568 ntAPPRIS P1 BASIC2.05□□□□□ -2.08
SHMT2P34897 AC103710.2-202ENST00000641454 2853 ntBASIC2.05□□□□□ -2.08
SHMT2P34897 RRAS2-211ENST00000537760 2034 ntTSL 2 BASIC2.05□□□□□ -2.08
SHMT2P34897 ZBED5-201ENST00000413761 2512 ntAPPRIS P1 TSL 1 (best) BASIC2.05□□□□□ -2.08
SHMT2P34897 EDDM3A-201ENST00000326842 927 ntAPPRIS P1 TSL 1 (best) BASIC2.05□□□□□ -2.08
SHMT2P34897 RNA5SP37-201ENST00000365420 130 ntBASIC2.05□□□□□ -2.08
SHMT2P34897 RNU6-898P-201ENST00000365627 104 ntBASIC2.05□□□□□ -2.08
SHMT2P34897 RNU6-395P-201ENST00000365662 106 ntBASIC2.05□□□□□ -2.08
SHMT2P34897 RNU6-19P-201ENST00000384718 107 ntBASIC2.05□□□□□ -2.08
SHMT2P34897 MT-TH-201ENST00000387441 69 ntBASIC2.05□□□□□ -2.08
SHMT2P34897 MIR147B-201ENST00000390185 80 ntBASIC2.05□□□□□ -2.08
SHMT2P34897 SNORA26.8-201ENST00000391306 124 ntBASIC2.05□□□□□ -2.08
SHMT2P34897 RN7SKP32-201ENST00000410167 303 ntBASIC2.05□□□□□ -2.08
SHMT2P34897 RPS3AP3-201ENST00000411933 242 ntBASIC2.05□□□□□ -2.08
SHMT2P34897 AP000473.1-201ENST00000413645 550 ntTSL 3 BASIC2.05□□□□□ -2.08
SHMT2P34897 AC114491.1-201ENST00000416095 246 ntBASIC2.05□□□□□ -2.08
SHMT2P34897 NPM1P11-201ENST00000417106 855 ntBASIC2.05□□□□□ -2.08
SHMT2P34897 AC093911.1-201ENST00000419129 552 ntTSL 4 BASIC2.05□□□□□ -2.08
SHMT2P34897 AC092660.1-201ENST00000420648 371 ntTSL 2 BASIC2.05□□□□□ -2.08
SHMT2P34897 OOSP1P1-201ENST00000423265 274 ntBASIC2.05□□□□□ -2.08
SHMT2P34897 HMGN2P38-201ENST00000423806 265 ntBASIC2.05□□□□□ -2.08
SHMT2P34897 AC007560.1-201ENST00000426912 237 ntBASIC2.05□□□□□ -2.08
SHMT2P34897 RPL30P4-201ENST00000429309 333 ntBASIC2.05□□□□□ -2.08
SHMT2P34897 RPS6P15-201ENST00000431996 751 ntBASIC2.05□□□□□ -2.08
SHMT2P34897 KCNJ6-AS1-201ENST00000435001 357 ntTSL 5 BASIC2.05□□□□□ -2.08
SHMT2P34897 AC112518.1-201ENST00000436089 575 ntTSL 4 BASIC2.05□□□□□ -2.08
SHMT2P34897 AL022238.1-201ENST00000442557 355 ntBASIC2.05□□□□□ -2.08
SHMT2P34897 AL158210.1-201ENST00000448835 500 ntTSL 3 BASIC2.05□□□□□ -2.08
SHMT2P34897 AL118520.1-201ENST00000450770 291 ntBASIC2.05□□□□□ -2.08
SHMT2P34897 AC003071.1-201ENST00000451219 789 ntBASIC2.05□□□□□ -2.08
SHMT2P34897 AC069549.1-201ENST00000451584 499 ntTSL 3 BASIC2.05□□□□□ -2.08
SHMT2P34897 AL021397.1-201ENST00000451806 248 ntBASIC2.05□□□□□ -2.08
SHMT2P34897 AL133481.3-201ENST00000456546 333 ntTSL 3 BASIC2.05□□□□□ -2.08
SHMT2P34897 RPS29P21-201ENST00000496272 170 ntBASIC2.05□□□□□ -2.08
SHMT2P34897 AC108078.2-201ENST00000510750 236 ntBASIC2.05□□□□□ -2.08
SHMT2P34897 VCAN-AS1-201ENST00000512090 424 ntTSL 3 BASIC2.05□□□□□ -2.08
SHMT2P34897 RNU1-41P-201ENST00000516161 162 ntBASIC2.05□□□□□ -2.08
SHMT2P34897 RNU1-48P-201ENST00000516400 162 ntBASIC2.05□□□□□ -2.08
SHMT2P34897 AC027807.1-201ENST00000559921 996 ntBASIC2.05□□□□□ -2.08
SHMT2P34897 AC008741.1-201ENST00000569456 510 ntTSL 3 BASIC2.05□□□□□ -2.08
SHMT2P34897 AC007948.1-201ENST00000581632 242 ntTSL 5 BASIC2.05□□□□□ -2.08
SHMT2P34897 MIR4658-201ENST00000584344 65 ntBASIC2.05□□□□□ -2.08
SHMT2P34897 LINC02112-205ENST00000606744 236 ntTSL 1 (best) BASIC2.05□□□□□ -2.08
SHMT2P34897 AC012409.4-201ENST00000612923 249 ntBASIC2.05□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 85.7 ms