Protein–RNA interactions for Protein: P31327

CPS1, Carbamoyl-phosphate synthase [ammonia], mitochondrial, humanhuman

Predictions only

Length 1,500 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPS1P31327 RNU6ATAC13P-201ENST00000516152 131 ntBASIC0.26□□□□□ -2.37
CPS1P31327 AC104009.1-203ENST00000531304 571 ntTSL 4 BASIC0.26□□□□□ -2.37
CPS1P31327 AC005832.3-201ENST00000537929 631 ntBASIC0.26□□□□□ -2.37
CPS1P31327 MRPL42-203ENST00000547098 701 ntTSL 3 BASIC0.26□□□□□ -2.37
CPS1P31327 AC012414.6-201ENST00000568241 401 ntBASIC0.26□□□□□ -2.37
CPS1P31327 AC010900.2-201ENST00000604508 210 ntBASIC0.26□□□□□ -2.37
CPS1P31327 Y_RNA.185-201ENST00000363894 100 ntBASIC0.25□□□□□ -2.37
CPS1P31327 TRAJ39-201ENST00000390498 63 ntAPPRIS P1 BASIC0.25□□□□□ -2.37
CPS1P31327 AC023141.4-201ENST00000412031 328 ntBASIC0.25□□□□□ -2.37
CPS1P31327 UBE2V1P4-201ENST00000425374 344 ntBASIC0.25□□□□□ -2.37
CPS1P31327 LINC00189-202ENST00000431661 308 ntTSL 5 BASIC0.25□□□□□ -2.37
CPS1P31327 RPS26P55-201ENST00000471178 356 ntBASIC0.25□□□□□ -2.37
CPS1P31327 LINC01495-202ENST00000534135 343 ntTSL 2 BASIC0.25□□□□□ -2.37
CPS1P31327 LINC02461-201ENST00000553211 836 ntTSL 3 BASIC0.25□□□□□ -2.37
CPS1P31327 ACTG1P17-203ENST00000561222 537 ntTSL 3 BASIC0.25□□□□□ -2.37
CPS1P31327 MIR4768-201ENST00000585270 74 ntBASIC0.25□□□□□ -2.37
CPS1P31327 AL078604.3-201ENST00000615580 211 ntBASIC0.25□□□□□ -2.37
CPS1P31327 AC009950.2-201ENST00000636548 183 ntBASIC0.25□□□□□ -2.37
CPS1P31327 RNA5SP98-201ENST00000363158 137 ntBASIC0.24□□□□□ -2.37
CPS1P31327 RNU6-1074P-201ENST00000383995 104 ntBASIC0.24□□□□□ -2.37
CPS1P31327 AL358794.1-201ENST00000445689 381 ntBASIC0.24□□□□□ -2.37
CPS1P31327 BET1P1-201ENST00000482276 359 ntBASIC0.24□□□□□ -2.37
CPS1P31327 GIN1-203ENST00000508629 1040 ntTSL 1 (best) BASIC0.24□□□□□ -2.37
CPS1P31327 MTCYBP16-201ENST00000509187 1129 ntBASIC0.24□□□□□ -2.37
CPS1P31327 AC113192.4-201ENST00000534666 547 ntTSL 4 BASIC0.24□□□□□ -2.37
CPS1P31327 HMGN2P15-201ENST00000585707 270 ntBASIC0.24□□□□□ -2.37
CPS1P31327 MALAT1-207ENST00000613376 132 ntTSL 3 BASIC0.24□□□□□ -2.37
CPS1P31327 RNU6-348P-201ENST00000384386 107 ntBASIC0.23□□□□□ -2.37
CPS1P31327 Y_RNA.493-201ENST00000384422 102 ntBASIC0.23□□□□□ -2.37
CPS1P31327 LINC00448-201ENST00000438352 402 ntTSL 3 BASIC0.23□□□□□ -2.37
CPS1P31327 AC069542.1-201ENST00000445235 557 ntTSL 3 BASIC0.23□□□□□ -2.37
CPS1P31327 SOX2-OT-216ENST00000497122 578 ntTSL 4 BASIC0.23□□□□□ -2.37
CPS1P31327 RNU4-54P-201ENST00000516428 129 ntBASIC0.23□□□□□ -2.37
CPS1P31327 AC068620.3-201ENST00000602749 560 ntBASIC0.23□□□□□ -2.37
CPS1P31327 AC073308.1-201ENST00000623696 305 ntBASIC0.23□□□□□ -2.37
CPS1P31327 ZBTB8OS-201ENST00000341885 312 ntTSL 1 (best) BASIC0.23□□□□□ -2.37
CPS1P31327 RNU6-43P-201ENST00000384302 107 ntBASIC0.23□□□□□ -2.37
CPS1P31327 RNU6-1035P-201ENST00000384477 107 ntBASIC0.23□□□□□ -2.37
CPS1P31327 RPS3AP36-201ENST00000398190 775 ntBASIC0.23□□□□□ -2.37
CPS1P31327 AC009158.1-206ENST00000417476 454 ntTSL 3 BASIC0.23□□□□□ -2.37
CPS1P31327 AP002075.1-201ENST00000505091 603 ntTSL 3 BASIC0.23□□□□□ -2.37
CPS1P31327 AC008539.1-201ENST00000507653 482 ntTSL 3 BASIC0.23□□□□□ -2.37
CPS1P31327 RNU6-197P-201ENST00000516680 100 ntBASIC0.23□□□□□ -2.37
CPS1P31327 U1.36-201ENST00000620684 176 ntBASIC0.23□□□□□ -2.37
CPS1P31327 OR5T3-201ENST00000303059 1023 ntBASIC0.22□□□□□ -2.37
CPS1P31327 MIR409-201ENST00000362237 79 ntBASIC0.22□□□□□ -2.37
CPS1P31327 RNU6-30P-201ENST00000384561 107 ntBASIC0.22□□□□□ -2.37
CPS1P31327 U6atac.2-201ENST00000408644 118 ntBASIC0.22□□□□□ -2.37
CPS1P31327 RPS27P16-201ENST00000425758 201 ntBASIC0.22□□□□□ -2.37
CPS1P31327 AC111000.5-201ENST00000506559 1178 ntBASIC0.22□□□□□ -2.37
CPS1P31327 IGLVI-20-201ENST00000519296 130 ntBASIC0.22□□□□□ -2.37
CPS1P31327 MIR5093-201ENST00000583199 100 ntBASIC0.22□□□□□ -2.37
CPS1P31327 KTN1-223ENST00000555573 1712 ntTSL 2 BASIC0.21□□□□□ -2.38
CPS1P31327 SNORA4.1-201ENST00000364263 144 ntBASIC0.21□□□□□ -2.38
CPS1P31327 RPS24P7-201ENST00000416921 246 ntBASIC0.21□□□□□ -2.38
CPS1P31327 AL449283.1-202ENST00000418249 604 ntBASIC0.21□□□□□ -2.38
CPS1P31327 CYP2C59P-201ENST00000457790 269 ntBASIC0.21□□□□□ -2.38
CPS1P31327 AC010789.1-201ENST00000458489 291 ntTSL 5 BASIC0.21□□□□□ -2.38
CPS1P31327 MTCYBP27-201ENST00000555160 670 ntBASIC0.21□□□□□ -2.38
CPS1P31327 AC073544.2-201ENST00000601155 540 ntBASIC0.21□□□□□ -2.38
CPS1P31327 MTRNR2L2-201ENST00000604882 87 ntBASIC0.21□□□□□ -2.38
CPS1P31327 AC012557.2-201ENST00000605919 418 ntBASIC0.21□□□□□ -2.38
CPS1P31327 AC083798.2-205ENST00000608015 575 ntTSL 5 BASIC0.21□□□□□ -2.38
CPS1P31327 AL357075.2-201ENST00000614906 189 ntBASIC0.21□□□□□ -2.38
CPS1P31327 AC009509.4-201ENST00000619202 509 ntBASIC0.21□□□□□ -2.38
CPS1P31327 USP9YP26-201ENST00000421008 661 ntBASIC0.2□□□□□ -2.38
CPS1P31327 USP9YP18-201ENST00000425912 695 ntBASIC0.2□□□□□ -2.38
CPS1P31327 USP9YP24-201ENST00000434374 697 ntBASIC0.2□□□□□ -2.38
CPS1P31327 USP9YP17-201ENST00000444617 696 ntBASIC0.2□□□□□ -2.38
CPS1P31327 TRBVA-201ENST00000498804 316 ntBASIC0.2□□□□□ -2.38
CPS1P31327 AC112206.3-201ENST00000514578 389 ntBASIC0.2□□□□□ -2.38
CPS1P31327 SNORA14.1-201ENST00000516113 141 ntBASIC0.2□□□□□ -2.38
CPS1P31327 AC136619.2-201ENST00000563361 631 ntBASIC0.2□□□□□ -2.38
CPS1P31327 AC018618.2-201ENST00000604770 446 ntBASIC0.2□□□□□ -2.38
CPS1P31327 TMEM154-204ENST00000613578 486 ntAPPRIS ALT2 TSL 5 BASIC0.2□□□□□ -2.38
CPS1P31327 RNU6-374P-201ENST00000364146 108 ntBASIC0.19□□□□□ -2.38
CPS1P31327 SNORA8.3-201ENST00000384679 139 ntBASIC0.19□□□□□ -2.38
CPS1P31327 RNU6-700P-201ENST00000391043 107 ntBASIC0.19□□□□□ -2.38
CPS1P31327 AL450344.2-201ENST00000455229 614 ntTSL 5 BASIC0.19□□□□□ -2.38
CPS1P31327 AC002350.1-201ENST00000490759 375 ntBASIC0.19□□□□□ -2.38
CPS1P31327 CLIC4P2-201ENST00000601934 717 ntBASIC0.19□□□□□ -2.38
CPS1P31327 AC108676.2-201ENST00000605225 163 ntBASIC0.19□□□□□ -2.38
CPS1P31327 HOXA11-AS1_6.1-201ENST00000620092 179 ntBASIC0.19□□□□□ -2.38
CPS1P31327 USP12-203ENST00000620323 349 ntTSL 3 BASIC0.19□□□□□ -2.38
CPS1P31327 AC012593.1-211ENST00000625996 799 ntTSL 5 BASIC0.19□□□□□ -2.38
CPS1P31327 RNU6-1243P-201ENST00000364028 107 ntBASIC0.18□□□□□ -2.38
CPS1P31327 AL162394.1-201ENST00000413271 419 ntTSL 2 BASIC0.18□□□□□ -2.38
CPS1P31327 GRM7-AS3-202ENST00000417482 454 ntTSL 3 BASIC0.18□□□□□ -2.38
CPS1P31327 AC007003.1-202ENST00000439318 349 ntTSL 5 BASIC0.18□□□□□ -2.38
CPS1P31327 AC010425.1-201ENST00000511734 554 ntTSL 4 BASIC0.18□□□□□ -2.38
CPS1P31327 RNA5SP134-201ENST00000516492 96 ntBASIC0.18□□□□□ -2.38
CPS1P31327 MIR4493-201ENST00000584016 73 ntBASIC0.18□□□□□ -2.38
CPS1P31327 AC012669.1-201ENST00000603209 283 ntBASIC0.18□□□□□ -2.38
CPS1P31327 AL138963.2-201ENST00000605137 226 ntBASIC0.18□□□□□ -2.38
CPS1P31327 ZEB2_AS1_1.1-201ENST00000621504 128 ntBASIC0.18□□□□□ -2.38
CPS1P31327 AC027335.2-201ENST00000624030 375 ntBASIC0.18□□□□□ -2.38
CPS1P31327 AC099654.5-201ENST00000636479 350 ntBASIC0.18□□□□□ -2.38
CPS1P31327 XRCC4-202ENST00000338635 1579 ntAPPRIS P4 TSL 2 BASIC0.18□□□□□ -2.38
CPS1P31327 AL136372.1-201ENST00000403060 228 ntBASIC0.18□□□□□ -2.38
CPS1P31327 AC099677.1-201ENST00000420575 175 ntBASIC0.18□□□□□ -2.38
Retrieved 100 of 98,524 protein–RNA pairs in 98.4 ms