Protein–RNA interactions for Protein: P23025

XPA, DNA repair protein complementing XP-A cells, humanhuman

Predicted RBP Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XPAP23025 RN7SKP295-201ENST00000517264 153 ntBASIC3.76□□□□□ -1.81
XPAP23025 TRAV32-201ENST00000553993 340 ntBASIC3.76□□□□□ -1.81
XPAP23025 AC087463.1-201ENST00000568541 556 ntTSL 2 BASIC3.76□□□□□ -1.81
XPAP23025 MIR3158-1-201ENST00000583596 81 ntBASIC3.76□□□□□ -1.81
XPAP23025 ZNF562-205ENST00000587392 583 ntTSL 2 BASIC3.76□□□□□ -1.81
XPAP23025 LUZP6-201ENST00000589735 177 ntAPPRIS P1 BASIC3.76□□□□□ -1.81
XPAP23025 SNORA62.6-201ENST00000606322 83 ntBASIC3.76□□□□□ -1.81
XPAP23025 AL589935.1-202ENST00000612512 393 ntTSL 5 BASIC3.76□□□□□ -1.81
XPAP23025 AC011890.2-201ENST00000613393 294 ntBASIC3.76□□□□□ -1.81
XPAP23025 KIAA0586-209ENST00000556134 5912 ntAPPRIS ALT2 TSL 5 BASIC3.76□□□□□ -1.81
XPAP23025 MCMDC2-201ENST00000313616 2043 ntTSL 2 BASIC3.76□□□□□ -1.81
XPAP23025 UFM1-201ENST00000239878 3138 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
XPAP23025 ZNF99-201ENST00000397104 3114 ntAPPRIS P1 TSL 5 BASIC3.76□□□□□ -1.81
XPAP23025 LRRC49-224ENST00000560691 2531 ntTSL 2 BASIC3.76□□□□□ -1.81
XPAP23025 FOXP2-206ENST00000393491 6085 ntTSL 5 BASIC3.76□□□□□ -1.81
XPAP23025 CCDC141-202ENST00000409284 6960 ntAPPRIS P2 TSL 1 (best) BASIC3.76□□□□□ -1.81
XPAP23025 USP33-201ENST00000357428 4155 ntTSL 5 BASIC3.76□□□□□ -1.81
XPAP23025 RAB3C-201ENST00000282878 8896 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
XPAP23025 HNRNPC-203ENST00000430246 4501 ntAPPRIS P2 TSL 1 (best) BASIC3.75□□□□□ -1.81
XPAP23025 MIR181A1HG-203ENST00000436880 2308 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
XPAP23025 RXFP1-205ENST00000448688 3861 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
XPAP23025 ZMYM2-203ENST00000382874 10139 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
XPAP23025 SPINK1-201ENST00000296695 542 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
XPAP23025 FTLP6-201ENST00000355274 422 ntBASIC3.75□□□□□ -1.81
XPAP23025 RNU6-140P-201ENST00000384566 108 ntBASIC3.75□□□□□ -1.81
XPAP23025 U8.11-201ENST00000384699 133 ntBASIC3.75□□□□□ -1.81
XPAP23025 U8.12-201ENST00000384701 133 ntBASIC3.75□□□□□ -1.81
XPAP23025 RPL21P17-201ENST00000397467 475 ntBASIC3.75□□□□□ -1.81
XPAP23025 RNU6-1077P-201ENST00000410506 102 ntBASIC3.75□□□□□ -1.81
XPAP23025 RNU2-68P-201ENST00000410878 191 ntBASIC3.75□□□□□ -1.81
XPAP23025 RNU6-325P-201ENST00000411132 105 ntBASIC3.75□□□□□ -1.81
XPAP23025 RNU6-293P-201ENST00000411259 106 ntBASIC3.75□□□□□ -1.81
XPAP23025 AL096701.2-201ENST00000416920 238 ntBASIC3.75□□□□□ -1.81
XPAP23025 LINC01344-201ENST00000420760 261 ntTSL 3 BASIC3.75□□□□□ -1.81
XPAP23025 AC243428.1-201ENST00000421099 264 ntBASIC3.75□□□□□ -1.81
XPAP23025 AC018865.2-201ENST00000423631 129 ntBASIC3.75□□□□□ -1.81
XPAP23025 USMG5P1-201ENST00000425964 177 ntBASIC3.75□□□□□ -1.81
XPAP23025 AL035666.1-201ENST00000446195 348 ntBASIC3.75□□□□□ -1.81
XPAP23025 PCMTD1P1-201ENST00000455560 355 ntBASIC3.75□□□□□ -1.81
XPAP23025 U8.18-201ENST00000459285 133 ntBASIC3.75□□□□□ -1.81
XPAP23025 TRBV12-2-201ENST00000489763 344 ntBASIC3.75□□□□□ -1.81
XPAP23025 PTPRG-AS1-210ENST00000498655 547 ntTSL 4 BASIC3.75□□□□□ -1.81
XPAP23025 RN7SKP18-201ENST00000516005 275 ntBASIC3.75□□□□□ -1.81
XPAP23025 AC022690.2-201ENST00000525673 589 ntTSL 3 BASIC3.75□□□□□ -1.81
XPAP23025 AC069029.1-201ENST00000558736 263 ntTSL 2 BASIC3.75□□□□□ -1.81
XPAP23025 KLHL23-207ENST00000602521 630 ntTSL 3 BASIC3.75□□□□□ -1.81
XPAP23025 DAOA-AS1_2.1-201ENST00000614829 187 ntBASIC3.75□□□□□ -1.81
XPAP23025 AC007485.1-201ENST00000616755 206 ntBASIC3.75□□□□□ -1.81
XPAP23025 5S_rRNA.12-201ENST00000617631 107 ntBASIC3.75□□□□□ -1.81
XPAP23025 Z69720.2-201ENST00000624755 279 ntBASIC3.75□□□□□ -1.81
XPAP23025 LINC02246-205ENST00000627623 417 ntTSL 5 BASIC3.75□□□□□ -1.81
XPAP23025 AL109837.2-201ENST00000632608 295 ntTSL 3 BASIC3.75□□□□□ -1.81
XPAP23025 FEZ2-201ENST00000305852 1782 ntTSL 5 BASIC3.75□□□□□ -1.81
XPAP23025 ZNF266-203ENST00000588933 3293 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
XPAP23025 FNDC3A-202ENST00000398316 5714 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
XPAP23025 AC025164.2-202ENST00000499685 5699 ntTSL 3 BASIC3.75□□□□□ -1.81
XPAP23025 USP15-203ENST00000353364 14950 ntAPPRIS P3 TSL 1 (best) BASIC3.75□□□□□ -1.81
XPAP23025 PANK1-202ENST00000322191 2513 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
XPAP23025 ZNF85-201ENST00000300540 1531 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
XPAP23025 ROCK1P1-203ENST00000608049 2457 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
XPAP23025 AC100800.1-201ENST00000524252 2054 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
XPAP23025 KIAA1109-203ENST00000388738 15574 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
XPAP23025 AL161668.1-201ENST00000320322 358 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
XPAP23025 RNA5SP124-201ENST00000362739 110 ntBASIC3.74□□□□□ -1.81
XPAP23025 Y_RNA.422-201ENST00000384054 114 ntBASIC3.74□□□□□ -1.81
XPAP23025 Y_RNA.496-201ENST00000384444 101 ntBASIC3.74□□□□□ -1.81
XPAP23025 MORN2-203ENST00000409131 544 ntTSL 5 BASIC3.74□□□□□ -1.81
XPAP23025 RAB9AP3-201ENST00000412737 573 ntBASIC3.74□□□□□ -1.81
XPAP23025 SNORD56-201ENST00000413522 71 ntBASIC3.74□□□□□ -1.81
XPAP23025 AC017074.1-201ENST00000424612 561 ntTSL 3 BASIC3.74□□□□□ -1.81
XPAP23025 C1orf195-201ENST00000424792 255 ntTSL 2 BASIC3.74□□□□□ -1.81
XPAP23025 AC069257.1-202ENST00000425275 422 ntTSL 3 BASIC3.74□□□□□ -1.81
XPAP23025 ARF4P2-201ENST00000430209 526 ntBASIC3.74□□□□□ -1.81
XPAP23025 AL627311.1-201ENST00000431514 115 ntBASIC3.74□□□□□ -1.81
XPAP23025 AL512844.2-201ENST00000433990 593 ntBASIC3.74□□□□□ -1.81
XPAP23025 RPS3AP46-201ENST00000448352 682 ntBASIC3.74□□□□□ -1.81
XPAP23025 RAB9AP1-201ENST00000449393 573 ntBASIC3.74□□□□□ -1.81
XPAP23025 AL031274.1-201ENST00000450334 232 ntBASIC3.74□□□□□ -1.81
XPAP23025 AC092798.1-201ENST00000458542 409 ntBASIC3.74□□□□□ -1.81
XPAP23025 HMGN2P13-201ENST00000476476 274 ntBASIC3.74□□□□□ -1.81
XPAP23025 TAF8-207ENST00000482432 556 ntTSL 2 BASIC3.74□□□□□ -1.81
XPAP23025 RPL30P14-201ENST00000482744 348 ntBASIC3.74□□□□□ -1.81
XPAP23025 MBNL1-218ENST00000485910 4257 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
XPAP23025 RPL32P34-201ENST00000486380 400 ntBASIC3.74□□□□□ -1.81
XPAP23025 GAB1-203ENST00000505913 2477 ntTSL 2 BASIC3.74□□□□□ -1.81
XPAP23025 RNU6-470P-201ENST00000515954 104 ntBASIC3.74□□□□□ -1.81
XPAP23025 RNU6-976P-201ENST00000516086 111 ntBASIC3.74□□□□□ -1.81
XPAP23025 RNU1-95P-201ENST00000516357 160 ntBASIC3.74□□□□□ -1.81
XPAP23025 RNU6-1046P-201ENST00000516538 107 ntBASIC3.74□□□□□ -1.81
XPAP23025 SNORA67.7-201ENST00000516664 135 ntBASIC3.74□□□□□ -1.81
XPAP23025 RNU1-128P-201ENST00000516704 160 ntBASIC3.74□□□□□ -1.81
XPAP23025 RNU6-699P-201ENST00000517081 110 ntBASIC3.74□□□□□ -1.81
XPAP23025 RNU6-711P-201ENST00000517255 106 ntBASIC3.74□□□□□ -1.81
XPAP23025 MDM2-221ENST00000517852 393 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
XPAP23025 AC105999.1-201ENST00000518722 473 ntTSL 3 BASIC3.74□□□□□ -1.81
XPAP23025 AC099793.1-201ENST00000567538 285 ntTSL 3 BASIC3.74□□□□□ -1.81
XPAP23025 AC008737.2-201ENST00000599446 118 ntBASIC3.74□□□□□ -1.81
XPAP23025 AP001836.1-201ENST00000604675 523 ntBASIC3.74□□□□□ -1.81
XPAP23025 SMAD5-AS1_1.1-201ENST00000619886 266 ntBASIC3.74□□□□□ -1.81
XPAP23025 HOXA11-AS1_4.1-201ENST00000620901 233 ntBASIC3.74□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 322.7 ms