Protein–RNA interactions for Protein: P04436

T-cell receptor alpha chain V region HPB-MLT (Fragment), humanhuman

Predictions only

Length 131 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P04436 SNRPGP18-201ENST00000553000 214 ntBASIC2.07□□□□□ -2.08
P04436 AL133241.1-201ENST00000556832 487 ntBASIC2.07□□□□□ -2.08
P04436 MIR1273D-201ENST00000577266 86 ntBASIC2.07□□□□□ -2.08
P04436 MIR4782-201ENST00000577987 79 ntBASIC2.07□□□□□ -2.08
P04436 AC096708.3-201ENST00000584226 559 ntTSL 2 BASIC2.07□□□□□ -2.08
P04436 AC005357.2-201ENST00000586473 583 ntTSL 2 BASIC2.07□□□□□ -2.08
P04436 Z94722.1-201ENST00000604328 474 ntBASIC2.07□□□□□ -2.08
P04436 AL049779.4-201ENST00000604500 156 ntBASIC2.07□□□□□ -2.08
P04436 ZNRD1-AS1_3.8-201ENST00000611686 104 ntBASIC2.07□□□□□ -2.08
P04436 AC026523.1-201ENST00000617221 490 ntTSL 5 BASIC2.07□□□□□ -2.08
P04436 AP003400.5-201ENST00000624827 617 ntBASIC2.07□□□□□ -2.08
P04436 LMBRD1-201ENST00000370570 2099 ntTSL 1 (best) BASIC2.06□□□□□ -2.08
P04436 ZDBF2-202ENST00000611847 9890 ntTSL 5 BASIC2.06□□□□□ -2.08
P04436 RICTOR-202ENST00000357387 9543 ntAPPRIS P1 TSL 1 (best) BASIC2.06□□□□□ -2.08
P04436 EFCAB3-202ENST00000450662 1694 ntTSL 5 BASIC2.06□□□□□ -2.08
P04436 FGF7P2-201ENST00000332473 296 ntBASIC2.06□□□□□ -2.08
P04436 RNA5SP125-201ENST00000364843 120 ntBASIC2.06□□□□□ -2.08
P04436 RNU6-190P-201ENST00000384154 102 ntBASIC2.06□□□□□ -2.08
P04436 SNORD116-8-201ENST00000384365 95 ntBASIC2.06□□□□□ -2.08
P04436 CTNNA2-204ENST00000409266 432 ntTSL 3 BASIC2.06□□□□□ -2.08
P04436 AF241725.1-201ENST00000416182 480 ntTSL 3 BASIC2.06□□□□□ -2.08
P04436 ELOCP4-201ENST00000420090 333 ntBASIC2.06□□□□□ -2.08
P04436 AC005062.1-206ENST00000424516 710 ntTSL 3 BASIC2.06□□□□□ -2.08
P04436 AL512656.1-201ENST00000427492 401 ntTSL 2 BASIC2.06□□□□□ -2.08
P04436 RPL23AP30-201ENST00000432419 501 ntBASIC2.06□□□□□ -2.08
P04436 AL356277.3-201ENST00000432484 618 ntTSL 3 BASIC2.06□□□□□ -2.08
P04436 AL117336.1-201ENST00000439198 380 ntTSL 2 BASIC2.06□□□□□ -2.08
P04436 AC016691.1-201ENST00000441321 413 ntBASIC2.06□□□□□ -2.08
P04436 AC018693.1-201ENST00000442829 550 ntTSL 4 BASIC2.06□□□□□ -2.08
P04436 UTAT33-202ENST00000449177 565 ntTSL 2 BASIC2.06□□□□□ -2.08
P04436 SNRPGP9-201ENST00000456025 225 ntBASIC2.06□□□□□ -2.08
P04436 AL441985.1-201ENST00000457727 251 ntBASIC2.06□□□□□ -2.08
P04436 SNORD42A-201ENST00000459584 64 ntBASIC2.06□□□□□ -2.08
P04436 AC117386.2-202ENST00000472821 522 ntTSL 3 BASIC2.06□□□□□ -2.08
P04436 FSBP-201ENST00000481490 1158 ntTSL 1 (best) BASIC2.06□□□□□ -2.08
P04436 RPS27P27-201ENST00000498779 255 ntBASIC2.06□□□□□ -2.08
P04436 FAM92A1P2-202ENST00000504766 877 ntBASIC2.06□□□□□ -2.08
P04436 RNU6-581P-201ENST00000516214 105 ntBASIC2.06□□□□□ -2.08
P04436 SNORA31.19-201ENST00000517079 126 ntBASIC2.06□□□□□ -2.08
P04436 AC021242.2-203ENST00000521842 687 ntTSL 3 BASIC2.06□□□□□ -2.08
P04436 LINC01493-203ENST00000534756 509 ntTSL 3 BASIC2.06□□□□□ -2.08
P04436 AC090531.1-202ENST00000548450 499 ntTSL 3 BASIC2.06□□□□□ -2.08
P04436 AL352955.1-201ENST00000555490 332 ntTSL 3 BASIC2.06□□□□□ -2.08
P04436 LINC00933-203ENST00000559812 219 ntBASIC2.06□□□□□ -2.08
P04436 AC026464.5-201ENST00000562497 722 ntBASIC2.06□□□□□ -2.08
P04436 AC006504.5-204ENST00000592404 765 ntTSL 3 BASIC2.06□□□□□ -2.08
P04436 AL645944.1-201ENST00000603857 493 ntBASIC2.06□□□□□ -2.08
P04436 AC090578.1-201ENST00000604955 591 ntBASIC2.06□□□□□ -2.08
P04436 AL121992.2-201ENST00000606262 256 ntBASIC2.06□□□□□ -2.08
P04436 HIKESHI-208ENST00000618164 499 ntTSL 5 BASIC2.06□□□□□ -2.08
P04436 AC010378.1-201ENST00000619270 362 ntBASIC2.06□□□□□ -2.08
P04436 Clostridiales-1.2-201ENST00000636724 160 ntBASIC2.06□□□□□ -2.08
P04436 KNL1-204ENST00000527044 5404 ntTSL 5 BASIC2.06□□□□□ -2.08
P04436 AC103710.2-202ENST00000641454 2853 ntBASIC2.06□□□□□ -2.08
P04436 ARHGAP5-202ENST00000345122 9604 ntAPPRIS P3 TSL 5 BASIC2.06□□□□□ -2.08
P04436 WWP1-201ENST00000265428 3362 ntAPPRIS P1 TSL 1 (best) BASIC2.05□□□□□ -2.08
P04436 SNORD3E-201ENST00000362899 217 ntBASIC2.05□□□□□ -2.08
P04436 RNY4P34-201ENST00000364779 95 ntBASIC2.05□□□□□ -2.08
P04436 RNU6-166P-201ENST00000384371 107 ntBASIC2.05□□□□□ -2.08
P04436 MIR221-201ENST00000385135 110 ntBASIC2.05□□□□□ -2.08
P04436 SNORA40.3-201ENST00000390964 122 ntBASIC2.05□□□□□ -2.08
P04436 RN7SKP223-201ENST00000410582 62 ntBASIC2.05□□□□□ -2.08
P04436 AC104777.3-201ENST00000416350 545 ntTSL 3 BASIC2.05□□□□□ -2.08
P04436 MED13P1-201ENST00000428342 171 ntBASIC2.05□□□□□ -2.08
P04436 MTATP6P16-201ENST00000434543 526 ntBASIC2.05□□□□□ -2.08
P04436 AL353706.1-201ENST00000436728 494 ntBASIC2.05□□□□□ -2.08
P04436 RPS24P1-201ENST00000438550 371 ntBASIC2.05□□□□□ -2.08
P04436 AC093639.1-201ENST00000441026 473 ntTSL 2 BASIC2.05□□□□□ -2.08
P04436 AP000477.2-201ENST00000447405 778 ntTSL 3 BASIC2.05□□□□□ -2.08
P04436 KLF3P2-201ENST00000465138 268 ntBASIC2.05□□□□□ -2.08
P04436 AC018437.1-201ENST00000492214 406 ntBASIC2.05□□□□□ -2.08
P04436 AC022493.1-201ENST00000492984 337 ntBASIC2.05□□□□□ -2.08
P04436 AC116655.1-201ENST00000508324 901 ntBASIC2.05□□□□□ -2.08
P04436 LINC02174-201ENST00000508977 553 ntTSL 3 BASIC2.05□□□□□ -2.08
P04436 RNU6ATAC9P-201ENST00000516210 116 ntBASIC2.05□□□□□ -2.08
P04436 RNU6-572P-201ENST00000516724 80 ntBASIC2.05□□□□□ -2.08
P04436 SPINK7-205ENST00000523535 299 ntTSL 2 BASIC2.05□□□□□ -2.08
P04436 OSBPL9P5-201ENST00000542581 171 ntBASIC2.05□□□□□ -2.08
P04436 AL157871.3-201ENST00000557231 293 ntBASIC2.05□□□□□ -2.08
P04436 PWRN1-209ENST00000568019 359 ntTSL 3 BASIC2.05□□□□□ -2.08
P04436 AC011933.3-201ENST00000578226 372 ntTSL 1 (best) BASIC2.05□□□□□ -2.08
P04436 AC069061.2-202ENST00000580280 357 ntTSL 3 BASIC2.05□□□□□ -2.08
P04436 CLIC4P2-201ENST00000601934 717 ntBASIC2.05□□□□□ -2.08
P04436 AL022154.1-201ENST00000604698 785 ntBASIC2.05□□□□□ -2.08
P04436 SNORD14A-201ENST00000606526 91 ntBASIC2.05□□□□□ -2.08
P04436 AC116312.1-201ENST00000606841 314 ntBASIC2.05□□□□□ -2.08
P04436 AC126118.1-201ENST00000607744 628 ntBASIC2.05□□□□□ -2.08
P04436 AC008250.2-201ENST00000615261 205 ntBASIC2.05□□□□□ -2.08
P04436 AC022079.1-201ENST00000621546 602 ntBASIC2.05□□□□□ -2.08
P04436 ZMYM1-203ENST00000373330 4203 ntAPPRIS P1 TSL 1 (best) BASIC2.05□□□□□ -2.08
P04436 AC073343.1-201ENST00000328239 651 ntBASIC2.04□□□□□ -2.08
P04436 SNORA3A-201ENST00000364113 130 ntBASIC2.04□□□□□ -2.08
P04436 RNU6-61P-201ENST00000365528 109 ntBASIC2.04□□□□□ -2.08
P04436 SNORA20.2-201ENST00000383922 131 ntBASIC2.04□□□□□ -2.08
P04436 RNY3P10-201ENST00000384764 102 ntBASIC2.04□□□□□ -2.08
P04436 AF228730.1-201ENST00000397972 663 ntBASIC2.04□□□□□ -2.08
P04436 AL591416.1-201ENST00000404015 867 ntBASIC2.04□□□□□ -2.08
P04436 SNORA11.4-201ENST00000408823 129 ntBASIC2.04□□□□□ -2.08
P04436 RNU6-1025P-201ENST00000410629 104 ntBASIC2.04□□□□□ -2.08
P04436 AF274854.1-201ENST00000413236 615 ntBASIC2.04□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 121 ms