Protein–RNA interactions for Protein: P02649

APOE, Apolipoprotein E, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOEP02649 RNU11-3P-201ENST00000391111 133 ntBASIC1.39□□□□□ -2.19
APOEP02649 RNU2-48P-201ENST00000410694 191 ntBASIC1.39□□□□□ -2.19
APOEP02649 AL162725.2-201ENST00000430545 748 ntTSL 5 BASIC1.39□□□□□ -2.19
APOEP02649 MTND4P15-201ENST00000437913 1033 ntBASIC1.39□□□□□ -2.19
APOEP02649 AL161937.1-201ENST00000444478 425 ntTSL 3 BASIC1.39□□□□□ -2.19
APOEP02649 RNU1-123P-201ENST00000458950 160 ntBASIC1.39□□□□□ -2.19
APOEP02649 RPL7P43-201ENST00000478876 753 ntBASIC1.39□□□□□ -2.19
APOEP02649 AC023194.1-201ENST00000493084 308 ntBASIC1.39□□□□□ -2.19
APOEP02649 AC026780.2-201ENST00000503489 730 ntTSL 5 BASIC1.39□□□□□ -2.19
APOEP02649 AC079917.1-202ENST00000534059 625 ntTSL 3 BASIC1.39□□□□□ -2.19
APOEP02649 AC087897.1-201ENST00000550134 156 ntBASIC1.39□□□□□ -2.19
APOEP02649 AC090049.1-201ENST00000551075 1011 ntTSL 3 BASIC1.39□□□□□ -2.19
APOEP02649 AC060771.1-201ENST00000582031 164 ntBASIC1.39□□□□□ -2.19
APOEP02649 AP001004.1-201ENST00000582468 324 ntBASIC1.39□□□□□ -2.19
APOEP02649 AC023043.2-201ENST00000589678 1026 ntBASIC1.39□□□□□ -2.19
APOEP02649 RPL30P11-203ENST00000598995 310 ntBASIC1.39□□□□□ -2.19
APOEP02649 AL157834.3-201ENST00000615543 103 ntBASIC1.39□□□□□ -2.19
APOEP02649 AC097655.1-201ENST00000635075 318 ntBASIC1.39□□□□□ -2.19
APOEP02649 AC099654.9-201ENST00000637055 678 ntBASIC1.39□□□□□ -2.19
APOEP02649 DLEU2_6.3-201ENST00000340052 136 ntBASIC1.38□□□□□ -2.19
APOEP02649 AL589826.1-201ENST00000340697 249 ntBASIC1.38□□□□□ -2.19
APOEP02649 RNU5E-1-201ENST00000362477 120 ntBASIC1.38□□□□□ -2.19
APOEP02649 RNU5B-4P-201ENST00000363508 111 ntBASIC1.38□□□□□ -2.19
APOEP02649 RNU6-338P-201ENST00000383888 105 ntBASIC1.38□□□□□ -2.19
APOEP02649 MIR758-201ENST00000390227 88 ntBASIC1.38□□□□□ -2.19
APOEP02649 RNA5SP465-201ENST00000391195 109 ntBASIC1.38□□□□□ -2.19
APOEP02649 AL359634.1-202ENST00000404721 284 ntBASIC1.38□□□□□ -2.19
APOEP02649 AL590084.1-201ENST00000407885 387 ntBASIC1.38□□□□□ -2.19
APOEP02649 RNA5SP501-201ENST00000410990 112 ntBASIC1.38□□□□□ -2.19
APOEP02649 AC009310.1-201ENST00000414414 451 ntBASIC1.38□□□□□ -2.19
APOEP02649 FO680682.1-201ENST00000421261 345 ntTSL 3 BASIC1.38□□□□□ -2.19
APOEP02649 AC008267.5-201ENST00000424928 265 ntBASIC1.38□□□□□ -2.19
APOEP02649 ZNF736P11Y-201ENST00000442535 1213 ntBASIC1.38□□□□□ -2.19
APOEP02649 AC009299.3-202ENST00000445372 538 ntTSL 3 BASIC1.38□□□□□ -2.19
APOEP02649 ELOCP30-201ENST00000447108 299 ntBASIC1.38□□□□□ -2.19
APOEP02649 LRRC70-203ENST00000491184 703 ntTSL 3 BASIC1.38□□□□□ -2.19
APOEP02649 MTCYBP18-201ENST00000501056 747 ntBASIC1.38□□□□□ -2.19
APOEP02649 AC093801.2-201ENST00000503966 1050 ntBASIC1.38□□□□□ -2.19
APOEP02649 AC108729.3-201ENST00000513484 108 ntBASIC1.38□□□□□ -2.19
APOEP02649 LINC02353-201ENST00000515181 849 ntTSL 1 (best) BASIC1.38□□□□□ -2.19
APOEP02649 DEFB131D-201ENST00000526803 184 ntBASIC1.38□□□□□ -2.19
APOEP02649 LINC02384-205ENST00000539404 785 ntTSL 3 BASIC1.38□□□□□ -2.19
APOEP02649 IMMP1LP2-201ENST00000552954 492 ntBASIC1.38□□□□□ -2.19
APOEP02649 AL445074.1-201ENST00000555362 318 ntTSL 2 BASIC1.38□□□□□ -2.19
APOEP02649 AC005154.1-222ENST00000579024 341 ntTSL 5 BASIC1.38□□□□□ -2.19
APOEP02649 AC012593.1-213ENST00000587255 510 ntTSL 5 BASIC1.38□□□□□ -2.19
APOEP02649 CLIC4P2-201ENST00000601934 717 ntBASIC1.38□□□□□ -2.19
APOEP02649 DLEU2_6.2-201ENST00000620994 136 ntBASIC1.38□□□□□ -2.19
APOEP02649 AL391987.6-201ENST00000305671 199 ntBASIC1.37□□□□□ -2.19
APOEP02649 RNU6-236P-201ENST00000363886 106 ntBASIC1.37□□□□□ -2.19
APOEP02649 TRDJ2-201ENST00000390475 54 ntAPPRIS P1 BASIC1.37□□□□□ -2.19
APOEP02649 AC004965.1-201ENST00000413033 213 ntBASIC1.37□□□□□ -2.19
APOEP02649 AL590705.2-201ENST00000420204 281 ntTSL 5 BASIC1.37□□□□□ -2.19
APOEP02649 LINC00387-201ENST00000422609 458 ntTSL 5 BASIC1.37□□□□□ -2.19
APOEP02649 AL024508.1-201ENST00000432477 505 ntTSL 2 BASIC1.37□□□□□ -2.19
APOEP02649 HYDIN2-201ENST00000493714 554 ntTSL 4 BASIC1.37□□□□□ -2.19
APOEP02649 AC104629.1-201ENST00000494226 508 ntBASIC1.37□□□□□ -2.19
APOEP02649 AC114801.2-201ENST00000503825 781 ntBASIC1.37□□□□□ -2.19
APOEP02649 LINC02064-201ENST00000506492 470 ntTSL 5 BASIC1.37□□□□□ -2.19
APOEP02649 RNU5B-3P-201ENST00000516601 115 ntBASIC1.37□□□□□ -2.19
APOEP02649 RNU6-362P-201ENST00000516736 90 ntBASIC1.37□□□□□ -2.19
APOEP02649 RNU6-586P-201ENST00000517265 104 ntBASIC1.37□□□□□ -2.19
APOEP02649 AL118556.1-201ENST00000555257 502 ntTSL 2 BASIC1.37□□□□□ -2.19
APOEP02649 MIR4782-201ENST00000577987 79 ntBASIC1.37□□□□□ -2.19
APOEP02649 AP005433.1-201ENST00000582939 620 ntTSL 2 BASIC1.37□□□□□ -2.19
APOEP02649 AL670379.10-201ENST00000604330 253 ntBASIC1.37□□□□□ -2.19
APOEP02649 AL670379.9-201ENST00000605428 253 ntBASIC1.37□□□□□ -2.19
APOEP02649 AC068506.1-202ENST00000613388 545 ntTSL 3 BASIC1.37□□□□□ -2.19
APOEP02649 AC112204.3-201ENST00000623822 332 ntBASIC1.37□□□□□ -2.19
APOEP02649 PPP1R3A-201ENST00000284601 4384 ntAPPRIS P1 TSL 1 (best) BASIC1.36□□□□□ -2.19
APOEP02649 ZNF29P-201ENST00000225587 168 ntBASIC1.36□□□□□ -2.19
APOEP02649 HTN1-201ENST00000246896 580 ntAPPRIS P1 TSL 1 (best) BASIC1.36□□□□□ -2.19
APOEP02649 IL36B-202ENST00000327407 1052 ntAPPRIS P1 TSL 1 (best) BASIC1.36□□□□□ -2.19
APOEP02649 Y_RNA.338-201ENST00000365320 114 ntBASIC1.36□□□□□ -2.19
APOEP02649 MIR29C-201ENST00000385231 88 ntBASIC1.36□□□□□ -2.19
APOEP02649 TRAJ23-201ENST00000390514 63 ntAPPRIS P1 BASIC1.36□□□□□ -2.19
APOEP02649 AC079150.1-201ENST00000413043 383 ntTSL 3 BASIC1.36□□□□□ -2.19
APOEP02649 RPL23AP36-201ENST00000413895 458 ntBASIC1.36□□□□□ -2.19
APOEP02649 UBE2V1P4-201ENST00000425374 344 ntBASIC1.36□□□□□ -2.19
APOEP02649 BRK1P2-201ENST00000442875 223 ntBASIC1.36□□□□□ -2.19
APOEP02649 AC013269.3-201ENST00000450486 444 ntTSL 3 BASIC1.36□□□□□ -2.19
APOEP02649 AC114912.1-201ENST00000503394 546 ntTSL 3 BASIC1.36□□□□□ -2.19
APOEP02649 FAM206BP-201ENST00000510179 541 ntBASIC1.36□□□□□ -2.19
APOEP02649 AC008869.1-201ENST00000510938 442 ntTSL 2 BASIC1.36□□□□□ -2.19
APOEP02649 SNORA31.3-201ENST00000516029 96 ntBASIC1.36□□□□□ -2.19
APOEP02649 AC021451.1-201ENST00000523498 1129 ntBASIC1.36□□□□□ -2.19
APOEP02649 DEFB130C-202ENST00000530001 230 ntBASIC1.36□□□□□ -2.19
APOEP02649 POC1B-211ENST00000549504 581 ntTSL 5 BASIC1.36□□□□□ -2.19
APOEP02649 AC068338.1-201ENST00000565567 176 ntBASIC1.36□□□□□ -2.19
APOEP02649 AC093249.1-201ENST00000567049 203 ntBASIC1.36□□□□□ -2.19
APOEP02649 MIR4498-201ENST00000577599 66 ntBASIC1.36□□□□□ -2.19
APOEP02649 BNIP3P10-201ENST00000605360 577 ntBASIC1.36□□□□□ -2.19
APOEP02649 AC016727.1-205ENST00000605437 569 ntBASIC1.36□□□□□ -2.19
APOEP02649 AL354696.1-201ENST00000614652 497 ntBASIC1.36□□□□□ -2.19
APOEP02649 AL353770.2-201ENST00000620024 78 ntBASIC1.36□□□□□ -2.19
APOEP02649 AC104985.3-201ENST00000623479 597 ntBASIC1.36□□□□□ -2.19
APOEP02649 AL391597.2-201ENST00000635698 479 ntTSL 5 BASIC1.36□□□□□ -2.19
APOEP02649 AP000560.1-201ENST00000624150 1937 ntBASIC1.36□□□□□ -2.19
APOEP02649 AC138393.1-203ENST00000327086 343 ntBASIC1.35□□□□□ -2.19
APOEP02649 snoZ40.1-201ENST00000364540 72 ntBASIC1.35□□□□□ -2.19
Retrieved 100 of 98,524 protein–RNA pairs in 132 ms