Protein–RNA interactions for Protein: P01130

LDLR, Low-density lipoprotein receptor, humanhuman

Predictions only

Length 860 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRP01130 RNU6-677P-201ENST00000516914 101 ntBASIC2.99□□□□□ -1.93
LDLRP01130 PSMA2P1-201ENST00000526365 646 ntBASIC2.99□□□□□ -1.93
LDLRP01130 AP003072.1-201ENST00000531740 145 ntBASIC2.99□□□□□ -1.93
LDLRP01130 AC243972.3-201ENST00000539655 198 ntBASIC2.99□□□□□ -1.93
LDLRP01130 AC008083.3-202ENST00000552063 277 ntTSL 3 BASIC2.99□□□□□ -1.93
LDLRP01130 AC021979.1-201ENST00000553822 336 ntTSL 3 BASIC2.99□□□□□ -1.93
LDLRP01130 DNAJC8P1-201ENST00000554535 372 ntBASIC2.99□□□□□ -1.93
LDLRP01130 TRAV28-201ENST00000557548 323 ntBASIC2.99□□□□□ -1.93
LDLRP01130 AC009145.1-201ENST00000563230 433 ntTSL 3 BASIC2.99□□□□□ -1.93
LDLRP01130 AC087749.2-201ENST00000583910 352 ntTSL 5 BASIC2.99□□□□□ -1.93
LDLRP01130 AC008739.1-201ENST00000598137 575 ntTSL 2 BASIC2.99□□□□□ -1.93
LDLRP01130 AC098826.3-201ENST00000603823 466 ntBASIC2.99□□□□□ -1.93
LDLRP01130 AC021646.1-201ENST00000605469 484 ntBASIC2.99□□□□□ -1.93
LDLRP01130 MIR1302-2-201ENST00000607096 138 ntBASIC2.99□□□□□ -1.93
LDLRP01130 Y_RNA.812-201ENST00000610788 101 ntBASIC2.99□□□□□ -1.93
LDLRP01130 AL365204.3-201ENST00000612448 685 ntBASIC2.99□□□□□ -1.93
LDLRP01130 Y_RNA.784-201ENST00000613803 101 ntBASIC2.99□□□□□ -1.93
LDLRP01130 AL157817.1-201ENST00000614264 790 ntBASIC2.99□□□□□ -1.93
LDLRP01130 Y_RNA.787-201ENST00000616522 101 ntBASIC2.99□□□□□ -1.93
LDLRP01130 Y_RNA.780-201ENST00000617336 101 ntBASIC2.99□□□□□ -1.93
LDLRP01130 MIR6076-201ENST00000617521 113 ntBASIC2.99□□□□□ -1.93
LDLRP01130 Y_RNA.801-201ENST00000619005 101 ntBASIC2.99□□□□□ -1.93
LDLRP01130 AC025034.2-201ENST00000623264 286 ntBASIC2.99□□□□□ -1.93
LDLRP01130 AC090617.7-201ENST00000623952 126 ntBASIC2.99□□□□□ -1.93
LDLRP01130 AL359757.2-201ENST00000624309 274 ntBASIC2.99□□□□□ -1.93
LDLRP01130 ANGPTL1-201ENST00000234816 3348 ntAPPRIS P1 TSL 1 (best) BASIC2.99□□□□□ -1.93
LDLRP01130 GPR183-201ENST00000376414 1700 ntAPPRIS P1 TSL 1 (best) BASIC2.99□□□□□ -1.93
LDLRP01130 ZGRF1-212ENST00000612287 2176 ntTSL 1 (best) BASIC2.98□□□□□ -1.93
LDLRP01130 ATF2-204ENST00000409437 3697 ntTSL 5 BASIC2.98□□□□□ -1.93
LDLRP01130 AC093010.3-201ENST00000570269 15214 ntBASIC2.98□□□□□ -1.93
LDLRP01130 Y_RNA.132-201ENST00000363421 102 ntBASIC2.98□□□□□ -1.93
LDLRP01130 RNU6-190P-201ENST00000384154 102 ntBASIC2.98□□□□□ -1.93
LDLRP01130 RNU2-33P-201ENST00000410344 192 ntBASIC2.98□□□□□ -1.93
LDLRP01130 AC063979.1-201ENST00000415539 377 ntBASIC2.98□□□□□ -1.93
LDLRP01130 RPL35AP12-201ENST00000425362 338 ntBASIC2.98□□□□□ -1.93
LDLRP01130 AC004691.1-201ENST00000440376 547 ntTSL 3 BASIC2.98□□□□□ -1.93
LDLRP01130 RPS12P18-201ENST00000442381 270 ntBASIC2.98□□□□□ -1.93
LDLRP01130 AC087588.1-201ENST00000462203 316 ntBASIC2.98□□□□□ -1.93
LDLRP01130 AC233702.1-201ENST00000482905 502 ntBASIC2.98□□□□□ -1.93
LDLRP01130 NREP-AS1-201ENST00000503242 411 ntTSL 3 BASIC2.98□□□□□ -1.93
LDLRP01130 AC008948.1-201ENST00000506058 325 ntTSL 2 BASIC2.98□□□□□ -1.93
LDLRP01130 RNU6-123P-201ENST00000516163 102 ntBASIC2.98□□□□□ -1.93
LDLRP01130 AC107953.1-201ENST00000522216 297 ntBASIC2.98□□□□□ -1.93
LDLRP01130 AP002404.1-201ENST00000532005 451 ntBASIC2.98□□□□□ -1.93
LDLRP01130 AL442663.2-201ENST00000554385 511 ntBASIC2.98□□□□□ -1.93
LDLRP01130 AL355375.2-201ENST00000574825 175 ntBASIC2.98□□□□□ -1.93
LDLRP01130 AC010525.2-201ENST00000590920 195 ntBASIC2.98□□□□□ -1.93
LDLRP01130 AC136601.2-201ENST00000604356 474 ntBASIC2.98□□□□□ -1.93
LDLRP01130 AC073657.2-201ENST00000605661 303 ntBASIC2.98□□□□□ -1.93
LDLRP01130 UBE2Q2P6-201ENST00000612666 153 ntBASIC2.98□□□□□ -1.93
LDLRP01130 DISC2.1-201ENST00000612827 205 ntBASIC2.98□□□□□ -1.93
LDLRP01130 AC068631.1-221ENST00000626006 592 ntTSL 5 BASIC2.98□□□□□ -1.93
LDLRP01130 PTP4A2-220ENST00000627328 615 ntTSL 5 BASIC2.98□□□□□ -1.93
LDLRP01130 AC100810.6-201ENST00000638068 285 ntBASIC2.98□□□□□ -1.93
LDLRP01130 AL137003.2-201ENST00000606924 2538 ntBASIC2.97□□□□□ -1.93
LDLRP01130 AL049641.1-201ENST00000441055 1948 ntBASIC2.97□□□□□ -1.93
LDLRP01130 ATP8A2P2-201ENST00000437678 1568 ntBASIC2.97□□□□□ -1.93
LDLRP01130 Y_RNA.67-201ENST00000362870 100 ntBASIC2.97□□□□□ -1.93
LDLRP01130 SNORA63-201ENST00000363450 132 ntBASIC2.97□□□□□ -1.93
LDLRP01130 Y_RNA.245-201ENST00000364493 95 ntBASIC2.97□□□□□ -1.93
LDLRP01130 RNU6-61P-201ENST00000365528 109 ntBASIC2.97□□□□□ -1.93
LDLRP01130 SPRR2E-201ENST00000368750 678 ntAPPRIS P1 TSL 1 (best) BASIC2.97□□□□□ -1.93
LDLRP01130 GSTA3-202ENST00000370968 775 ntTSL 1 (best) BASIC2.97□□□□□ -1.93
LDLRP01130 RNU6-1027P-201ENST00000383998 107 ntBASIC2.97□□□□□ -1.93
LDLRP01130 AL591416.1-201ENST00000404015 867 ntBASIC2.97□□□□□ -1.93
LDLRP01130 AL590004.1-201ENST00000405321 300 ntBASIC2.97□□□□□ -1.93
LDLRP01130 AL162578.1-201ENST00000406202 378 ntBASIC2.97□□□□□ -1.93
LDLRP01130 RN7SKP123-201ENST00000410732 291 ntBASIC2.97□□□□□ -1.93
LDLRP01130 RPS12P24-201ENST00000412619 387 ntBASIC2.97□□□□□ -1.93
LDLRP01130 MTCO3P46-201ENST00000425787 232 ntBASIC2.97□□□□□ -1.93
LDLRP01130 SRIP2-201ENST00000428470 166 ntBASIC2.97□□□□□ -1.93
LDLRP01130 AL353612.1-201ENST00000428769 465 ntTSL 3 BASIC2.97□□□□□ -1.93
LDLRP01130 AL591212.2-201ENST00000433923 257 ntBASIC2.97□□□□□ -1.93
LDLRP01130 Z82210.1-201ENST00000440037 231 ntBASIC2.97□□□□□ -1.93
LDLRP01130 RPS29P15-201ENST00000458329 171 ntBASIC2.97□□□□□ -1.93
LDLRP01130 MRPS17P3-201ENST00000465453 385 ntBASIC2.97□□□□□ -1.93
LDLRP01130 RPL30P14-201ENST00000482744 348 ntBASIC2.97□□□□□ -1.93
LDLRP01130 AC079943.1-201ENST00000491909 466 ntTSL 3 BASIC2.97□□□□□ -1.93
LDLRP01130 AC104304.1-201ENST00000505797 291 ntAPPRIS P1 TSL 3 BASIC2.97□□□□□ -1.93
LDLRP01130 AC103851.1-201ENST00000506833 274 ntBASIC2.97□□□□□ -1.93
LDLRP01130 RBBP4P6-201ENST00000508098 202 ntBASIC2.97□□□□□ -1.93
LDLRP01130 RNU7-30P-201ENST00000516835 62 ntBASIC2.97□□□□□ -1.93
LDLRP01130 RNU6-928P-201ENST00000516876 104 ntBASIC2.97□□□□□ -1.93
LDLRP01130 SUB1P1-201ENST00000524415 382 ntBASIC2.97□□□□□ -1.93
LDLRP01130 AC100768.1-201ENST00000525512 506 ntTSL 3 BASIC2.97□□□□□ -1.93
LDLRP01130 ATP5F1P5-201ENST00000526403 760 ntBASIC2.97□□□□□ -1.93
LDLRP01130 AC011939.2-201ENST00000567396 428 ntTSL 3 BASIC2.97□□□□□ -1.93
LDLRP01130 AL161798.1-201ENST00000604630 131 ntBASIC2.97□□□□□ -1.93
LDLRP01130 AC022893.3-201ENST00000607665 437 ntBASIC2.97□□□□□ -1.93
LDLRP01130 AC090617.10-201ENST00000624308 134 ntBASIC2.97□□□□□ -1.93
LDLRP01130 AL109837.2-201ENST00000632608 295 ntTSL 3 BASIC2.97□□□□□ -1.93
LDLRP01130 U6.114-201ENST00000636407 96 ntBASIC2.97□□□□□ -1.93
LDLRP01130 MTND5P42-201ENST00000637720 498 ntBASIC2.97□□□□□ -1.93
LDLRP01130 RAPGEF6-202ENST00000308008 4176 ntTSL 1 (best) BASIC2.97□□□□□ -1.93
LDLRP01130 MINDY3-202ENST00000378036 2452 ntTSL 2 BASIC2.97□□□□□ -1.93
LDLRP01130 EBAG9-210ENST00000620557 2186 ntAPPRIS P1 TSL 3 BASIC2.97□□□□□ -1.93
LDLRP01130 TPTE2P4-201ENST00000258589 1605 ntBASIC2.97□□□□□ -1.93
LDLRP01130 CCDC82-202ENST00000423339 1878 ntAPPRIS P2 TSL 1 (best) BASIC2.96□□□□□ -1.93
LDLRP01130 AMY2B-208ENST00000610648 1736 ntAPPRIS P1 TSL 1 (best) BASIC2.96□□□□□ -1.93
LDLRP01130 PPIP5K2-203ENST00000414217 5842 ntAPPRIS P3 TSL 1 (best) BASIC2.96□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 101.3 ms